Gene

KWMTBOMO04825

Pre Gene Modal

BGIBMGA009826

Annotation

PREDICTED:_protein_deltex_[Bombyx_mori]

Location

Bomo_Chr8(-):15985725-15991111      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.421

CDS

ATGTCTTCAGTCCACTGCGTTGTAGTATGGGAGTGGCAGTCAAATGGTCAATGGTTACCACACACGCCAAGTGTTACAAGGACCCTAGAAAGGGCTCATGCTAAGAAGTTAACCAGGGTGGTATTGGCTGATGCTGATCCAGCATTGAAGGGATATTATGTTAACTTGCTGACCCTGACACAGAGTAATGAGACGCCTGATGGTGGAATATTAGAGTGTGGTGTGCGTAGATCATGCTACAGTGTGCAGTCCGTAGCCGGACGGGGCTGGTGCTGGGAATGGGCTCGGTTTATGCCTCCTCCTGGCGCTGGAGAGCTACTCTATGACCCTCTGCCGCTTGATAAACAATGCCATCTAGAAGAGTCTTGGTCTCGGGGGATAGAAGTCGTAACATTGGACAATTGGGTGGTGTCGCTCTCCTGCATGACGGGGCGGAGCGGGGCGGCGGTGAGGCTGCTCCGGCGCGCGCCCCACCCCCCCTACCCGCTCACCCTCACCCCGCAGCCGCCCCCGCCGCCCAACCTGCAGAGACAGCTTGACGTTCGCAAAAGTCGCATCCCGCAGCAGCACACGGGGGCCAGCTGCCACTCCGCCCACTCCGCGCCGCCCGCCCTCCCCGCGCCCCCCGCCCCGCCCCGGAGTGCGTCGCCGAAGGACAGGAAGCCGGGCATAGCGAGGCAGATATTGCACAACTTGAATATATTTAGCAACAACAACAAGAGTCCGGGGGGCGGCGCGCGCGACTCGGAGTGCACCAGCACGGGCTCCGGCGGCGGCAGGAGGCACAGCGTGGACACCGTGTCCACCTACCTCAGCCACGAGAGCAAGGACAGTTTGCAGGCGGCCGTGGGCGAGCTGCTCAACTGCAGCGGCGGCAGCGACGACGTGTTCGAGTCCCCGGCGCCCTCCGCCGACGAACTCGACCTCTCCGACGAGACTGTCGACGAGTCGTGGTGGGCGGCGGTGCGCGAGTGGACGCGGCGCGGCGCCCCCCGCGGCCCGTGCGCGCTGTGTGACGTCACGGTGCAGGGCGGGCGCGCGCTGGCTCGCTGCGGGCACGCGCTGCACGCCGCCTGCCTCGCGCGCCGTCTGCGGGCCCTGGCGCGGGCCGGGGAACCTCTGCACGTGGAGTGCGGCGCGTGCGGACACTCGTACGGGGCGCCCGGGCCTCCGCCTCGCGCCGCGCCGCGCCCCCCCCTGTGCAGCGGCGCGCAGCCCCGGGGCAGCATGTCGTGGCGCCTGCAGCCGGTCTCCCTGCCGCAATTTGAATACAGCTCGTCCATACTCGTCACATACAACTTCCAATCCGGCACGCAGGGCGCCGCGCACCCCGCGCCGGGCTCGCCCTACTACGCCGTGGGCTTCCCGCGACATTCGCTGCTGCCCGACACGCAGCTGGGGCGCCAGGTGGTGGTGTCGCTGCGGCTGGCGTGGGAGCGCGGCCTGCTGTTCGTAGTGCGCACTTCGCGCACGACGGGCCGCGAGCACGTGGTGGCGTGGAGCTGCCCGCCCCCGCCGCCCTCCCGCGCCGCGCACTACCGCCCCCCCGCGCGCCCCGCCGACCTGCTGGCCGACCTGCTGCAGCGCCTGCACCGCCTCGCGCACCCCGCGCACCCCGCGCACCCCGCACACCCCGCACACCACCCTACTGCACCGTAG

Protein

MSSVHCVVVWEWQSNGQWLPHTPSVTRTLERAHAKKLTRVVLADADPALKGYYVNLLTLTQSNETPDGGILECGVRRSCYSVQSVAGRGWCWEWARFMPPPGAGELLYDPLPLDKQCHLEESWSRGIEVVTLDNWVVSLSCMTGRSGAAVRLLRRAPHPPYPLTLTPQPPPPPNLQRQLDVRKSRIPQQHTGASCHSAHSAPPALPAPPAPPRSASPKDRKPGIARQILHNLNIFSNNNKSPGGGARDSECTSTGSGGGRRHSVDTVSTYLSHESKDSLQAAVGELLNCSGGSDDVFESPAPSADELDLSDETVDESWWAAVREWTRRGAPRGPCALCDVTVQGGRALARCGHALHAACLARRLRALARAGEPLHVECGACGHSYGAPGPPPRAAPRPPLCSGAQPRGSMSWRLQPVSLPQFEYSSSILVTYNFQSGTQGAAHPAPGSPYYAVGFPRHSLLPDTQLGRQVVVSLRLAWERGLLFVVRTSRTTGREHVVAWSCPPPPPSRAAHYRPPARPADLLADLLQRLHRLAHPAHPAHPAHPAHHPTAP

Uniprot

A0A212FEN2   A0A1W4XIZ2   A0A1W4X8H6   A0A1L8DSS8   N6TPG3   A0A1Y1M5T8   + More
A0A1B6BZE4   A0A0A9YQW6   A0A0N0BKC3   T1HQR2   A0A232F3T4   A0A2R7W8I6   K7IS00   A0A088AJP0   E2A4W2   A0A2A3E855   A0A2S2PR04   A0A026W4H7   A0A2H8TPY3   A0A0L7R195   E2BZY9   A0A1B6LVH8   A0A158NET1   F4WED6   A0A195CSV1   A0A195E8X9   A0A195FN43   A0A0J7L6B9   A0A310SN88   A0A151XIT5   E9J210  

Pubmed

22118469    23537049    28004739    25401762    28648823    20075255    + More
20798317    24508170    30249741    21347285    21719571    21282665   

EMBL

AGBW02008930    OWR52168.1    GFDF01004684    JAV09400.1    APGK01056711    KB741277    + More
KB631624    ENN71105.1    ERL84776.1    GEZM01042293    JAV79960.1    GEDC01030938    GEDC01029531    JAS06360.1    JAS07767.1    GBHO01008157    GBHO01008154    JAG35447.1    JAG35450.1    KQ435701    KOX80388.1    ACPB03000491    NNAY01001009    OXU25506.1    KK854462    PTY16044.1    GL436754    EFN71531.1    KZ288349    PBC27462.1    GGMR01019188    MBY31807.1    KK107455    QOIP01000010    EZA50501.1    RLU17824.1    GFXV01003897    MBW15702.1    KQ414668    KOC64612.1    GL451708    EFN78766.1    GEBQ01012322    JAT27655.1    ADTU01013644    ADTU01013645    GL888103    EGI67423.1    KQ977381    KYN03199.1    KQ979479    KYN21289.1    KQ981490    KYN41314.1    LBMM01000383    KMQ98698.1    KQ760688    OAD59369.1    KQ982080    KYQ60215.1    GL767714    EFZ13137.1   

Proteomes

UP000007151    UP000192223    UP000019118    UP000030742    UP000053105    UP000015103    + More
UP000215335    UP000002358    UP000005203    UP000000311    UP000242457    UP000053097    UP000279307    UP000053825    UP000008237    UP000005205    UP000007755    UP000078542    UP000078492    UP000078541    UP000036403    UP000075809   

Pfam

PF02825   WWE        + More
PF18102   DTC
PF13639   zf-RING_2
PF00097   zf-C3HC4

Interpro

IPR037197   WWE_dom_sf        + More
IPR039396   Deltex_C       
IPR018123   WWE-dom_subgr       
IPR039399   Deltex_C_sf       
IPR004170   WWE-dom       
IPR039398   Deltex_fam       
IPR013083   Znf_RING/FYVE/PHD       
IPR001841   Znf_RING       
IPR018957   Znf_C3HC4_RING-type       

SUPFAM

SSF117839   SSF117839       

Gene 3D

3.30.390.130     3.30.40.10     3.30.720.50    

CDD

cd09633  Deltex_C

ProteinModelPortal

A0A212FEN2   A0A1W4XIZ2   A0A1W4X8H6   A0A1L8DSS8   N6TPG3   A0A1Y1M5T8   + More
A0A1B6BZE4   A0A0A9YQW6   A0A0N0BKC3   T1HQR2   A0A232F3T4   A0A2R7W8I6   K7IS00   A0A088AJP0   E2A4W2   A0A2A3E855   A0A2S2PR04   A0A026W4H7   A0A2H8TPY3   A0A0L7R195   E2BZY9   A0A1B6LVH8   A0A158NET1   F4WED6   A0A195CSV1   A0A195E8X9   A0A195FN43   A0A0J7L6B9   A0A310SN88   A0A151XIT5   E9J210  

PDB

2A90     E-value=3.0474e-25,     Score=287

KEGG

101745320    K06058 deltex [EC:2.3.2.27] | (RefSeq) protein deltex

PATHWAY

04330    Notch signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0007219   GO:0008270   GO:0016567   GO:0016874   GO:0043022   GO:0016020   GO:0007264   GO:0008083   GO:0006003   GO:0006032   GO:0005515   GO:0016742   GO:0003824  

PANTHER

PTHR12622  

Length:

552

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00181

Exp number, first 60 AAs:

0.00059

Total prob of N-in:

0.00126

outside

1  -  552

 

 

Pi

13.65144

Theta

15.907069

Tajima's D

-0.608922

CLR

0.892925

CSRT

0.219839008049598

Interpretation

Uncertain