SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04813  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009834
Annotation
Uncharacterized_protein_OBRU01_26427_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 2.797
 

Sequence

CDS
ATGTTTTCATCGTTTTTCGGAAAAAGGAGATCATCACCAGTTGAAGACGAGACACCGCCGATACCTGGCCCGAAGTCCGACGATGGATTTGTCGTCGTTGATCCTACGTCTCCAAGAGGTAGTATTTACCCCAGTGTTGGGCCTGGATCAAGTCCGTATCCTCAAAGACCTGCCCCAGCCGCACCTCTGCCTAGGCCCAGAGCCGAGCAACCGTTTCACTATCTTCAAGGAGTCCCATTTTCGATGTCAAAGGAACTACAAATGTCTGCTAACAAGGATTCTTACGCGCGAGAAATTAGTGATCTCCTAGCTTTCCTAACTAACAAAATCACAATGAACAATTATGAATATGATTTCTCTGTTGAAAGAAGTGTTATAAAAGAGTGCTAA
Protein
MFSSFFGKRRSSPVEDETPPIPGPKSDDGFVVVDPTSPRGSIYPSVGPGSSPYPQRPAPAAPLPRPRAEQPFHYLQGVPFSMSKELQMSANKDSYAREISDLLAFLTNKITMNNYEYDFSVERSVIKEC

Summary

Pfam
PF10240   DUF2464
Interpro
IPR023340   UMA        + More
IPR018798   MVB12A/B       

Ontologies

Topology

Length:
129
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00021
Exp number, first 60 AAs:
0
Total prob of N-in:
0.12036
outside
1  -  129
 
 

Population Genetic Test Statistics

Pi
17.00262
Theta
17.197293
Tajima's D
-0.178643
CLR
0.938413
CSRT
0.324683765811709
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 ITIFTEGCHGHITK 100.00 5e-04
26822097 MFSSFFGK 100.00 0.002
26280517 SATYGQVIHR 100.00 0.002
28467696 SDCHGFVVPAPYEVYPK 100.00 0.002
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