SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04809
Pre Gene Modal
BGIBMGA009914
Annotation
PREDICTED:_uncharacterized_protein_LOC106133170_isoform_X2_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 1.215 Nuclear   Reliability : 1.081
 

Sequence

CDS
ATGTCGTTCCGGAGGCTGATGAGCGCTGTGCGATCTGCGCGGGAAGCCATAGCCAACAGCGCGCCCCTGGCGGACCGACTCCTCAAATCGCTGCTTTCCGTCGTGGTGATACTGTGCATAGCGGTGTCCTCTCCACCGCCGGCTTCCGCGAAGCCTTTTGCTATAAGCTTCCCGGCAGGCTGGTCCCTTGCCGGCTTCGTGGGCAGTGTGGGCGCTCGAGCGGATGAACCCCAGCGGAAGGAGCCGGCGGCAGGCGTGAAGCCTTACACGGGCCGACGAATCAGCAACGATACATTGAGAATGATATACTACCACGACCAGACCGTGGCGGTCGTGGAGCTAGGAACGAACAAGTTATTGCTCAACTGCGAACTCATCGAGACATACGATGAAGAAGATACGAAGAGACTGCTCCGTCAGTTGAGCTCCATCAACCGTCCTCTGGAAGTCACCTTCCAGCAAATGGTGAATCTAATGGCACAATGCCAACAGGTAGAAGGTGTAGAAGCTCAAGACGAGACGGGACGAGAGTTCAATGGCTGGAGAGAAAAGAGTAGCAGTGCAGCGGCTAAAGCGCGGCTGGACGCAGGAGGAGCACACGCAGGGCTCCTGGGCGGCAGTCCGCTCACACTCCTCCAGGGCATCATCCCTGGTACAAAATGGTGCGGTACTGGGGATATAGCCGCCGATTACCATGACTTGGGCGCTGACAGGCGACTGGACCGCTGCTGTAGAACCCATGACCTTTGCCCAACTAAAGTTAGAGCATTCTCCAAACGCTACAACCTTATTAATAATTCTTTATACAGCAAATCGCATTGCGCATGCGACGACATGTTATTCGACTGTTTGAAAGCCACTAATACATCCGCCTCACATCTAATGGGCCATATTTATTTTAACCTAGTTCAAGTCCCGTGCTTAGAAGACATTCCAAACGGAAGACGGTTTAGGAACGCGAAAGAAGGTTTTTGA
Protein
MSFRRLMSAVRSAREAIANSAPLADRLLKSLLSVVVILCIAVSSPPPASAKPFAISFPAGWSLAGFVGSVGARADEPQRKEPAAGVKPYTGRRISNDTLRMIYYHDQTVAVVELGTNKLLLNCELIETYDEEDTKRLLRQLSSINRPLEVTFQQMVNLMAQCQQVEGVEAQDETGREFNGWREKSSSAAAKARLDAGGAHAGLLGGSPLTLLQGIIPGTKWCGTGDIAADYHDLGADRRLDRCCRTHDLCPTKVRAFSKRYNLINNSLYSKSHCACDDMLFDCLKATNTSASHLMGHIYFNLVQVPCLEDIPNGRRFRNAKEGF

Summary

Similarity
Belongs to the phospholipase A2 family.
EMBL
NWSH01000074    PCG79936.1    AGBW02008504    OWR53152.1    GANO01004808    JAB55063.1    + More
CVRI01000063    CRL04401.1    UFQT01000041    SSX18690.1    FJ768719    KQ971361    ACN42748.1    EFA07968.1    CH477620    EAT38212.1    KA648879    AFP63508.1    ADMH02000109    ETN67803.1    APCN01004913    OUUW01000003    SPP77775.1    JRES01000037    KNC34661.1    CH964291    EDW86302.1    GEZM01096056    JAV55179.1    CH940653    EDW62309.1    KRF80553.1    GGFK01006267    MBW39588.1    AY071131    AAL48753.1    DS233566    EDS30555.1    AE014298    AHN59655.1    GGFK01007140    MBW40461.1    CH902632    EDV32835.1    KPU74162.1    KPU74163.1    CH954180    EDV47238.1    AAF48228.2    CH480836    EDW48976.1    GDHF01025926    JAI26388.1    CH379064    EAL31891.2    CM000366    EDX17785.1    GAKP01014813    GAKP01014809    GAKP01014805    JAC44139.1    CH933812    EDW05955.2    GBXI01016412    JAC97879.1    CM000162    EDX01532.2    CH916370    EDW00117.1    GAMC01018257    GAMC01018256    GAMC01018255    JAB88298.1    GFDF01005572    JAV08512.1    CH479200    EDW29679.1    KC170982    AGT96476.1    AY861671    AAX54852.1    KC170949    AGT96443.1    DQ154097    ABA43062.1    EZ000627    ACS93491.1    AJWK01032852    AJWK01032853    AJWK01032854    CCAG010015359    ABLF02021831    GFXV01000701    MBW12506.1    GGMR01000259    MBY12878.1    GEDC01014316    JAS22982.1    KQ435821    KOX72448.1    KQ435078    KZC14498.1    KK853603    KDR06363.1    QOIP01000004    RLU23674.1    GBYB01012744    JAG82511.1    KZ288215    PBC32561.1    GEBQ01032004    JAT07973.1    GECU01024335    JAS83371.1    KK107046    EZA61723.1    KQ976424    KYM88478.1    ADTU01013057    GL763054    EFZ20207.1    GL887888    EGI69617.1    LBMM01001117    KMQ96893.1    DS233465    EDS30114.1   
Pfam
PF05826   Phospholip_A2_2        + More
PF00782   DSPc
PF01331   mRNA_cap_enzyme
PF03919   mRNA_cap_C
Interpro
IPR033113   PLipase_A2_His_AS        + More
IPR016090   PLipase_A2_dom       
IPR036444   PLipase_A2_dom_sf       
IPR000340   Dual-sp_phosphatase_cat-dom       
IPR013846   mRNA_cap_enzyme_C       
IPR001339   mRNA_cap_enzyme       
IPR000387   TYR_PHOSPHATASE_dom       
IPR012340   NA-bd_OB-fold       
IPR016130   Tyr_Pase_AS       
IPR029021   Prot-tyrosine_phosphatase-like       
SUPFAM
SSF48619   SSF48619        + More
SSF52799   SSF52799       
SSF50249   SSF50249       
Gene 3D
PDB
1POC     E-value=2.79183e-18,     Score=225

Ontologies

Topology

Subcellular location
Secreted  
Length:
324
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.64801000000001
Exp number, first 60 AAs:
3.15483
Total prob of N-in:
0.15661
outside
1  -  324
 
 

Population Genetic Test Statistics

Pi
20.457791
Theta
17.615404
Tajima's D
-1.967779
CLR
1.702829
CSRT
0.0164991750412479
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号