SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04807
Pre Gene Modal
BGIBMGA009836
Annotation
PREDICTED:_uncharacterized_protein_LOC101739530_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.428
 

Sequence

CDS
ATGAACGACCCGTGGGATGTGAAATCGGTGCGACAGTCCGGACAGTATGTATCCTGCATGAAGATTAATGGTGTGCCTCTTCTACCGCCTGTCCTATCAAAAGAATGTCGCAAAGAGATGCAGTACTACAAACTTTTGGCCAAAGAAGTCGAAAAGCGAATATCATTGCTTCAGCCCTATATAGCTGAAAGTGAATCGGAATCTAGCGAAGACAGGACCGATGCGCCAGAGATTCCAGAATCTGAGGAAATACAAACTGAATGCAAAATAACGAGCGTTTTAAGCGATGAAGTTTACGAAAAAGCACTTAAAGAATCACCGAAAGCACAGCCAAATGTTTGCAATACGATAAATTCTAGTGTCACAGTACTTGAAAGGACGAAATCACCAAAATTTAGGATCGATTTAAATCTAAATATAAGCGGCACAGCTAAAAATTTTCTCGATAAAGACACTGAAACAATACGTTGTATTTCGGAACCAGTAGAGCTACCAGAACGGGATTATGACTGTAATAAAGTTAATGTTAAAAGACAAGCTATTGAATTTGAAGATATCAATAACGATAAAACAGTTGCCAAATTAAATTTTATAATTGGTTCAGATAAAAATGTTGAAGAGCCGTTTCCTGATTTGCCTTCGGCACAAGACGGACCGCCTTCTCTTAGTTCTAAAAGCTTCACGGGATCCCTTAACGATATACATACAGATAGTTTGAAAGAGTCACAAATAGTACCTAAACTCACCCGTCAAAGATCGTACACGCTTTTAAAACCGAGTCCGCAACTACTAGCGCATTTAGAAGTAGAATCTTTGAACACTGGAGTCGAAATGAGCTGCATTTCTATGAGCGAATCGTTGTCGAACTTGAGCGCACCAAATAAAAAACGCAGAAGTTGGGATTTAGAAACTGCTAAAGTCAAGTGGTCGTCCATGGCGATGGAATTAAAACAAAAGAATGTATCAAAAACGTCTAGCCTGAACTGCGTGAACAGAGTCAATAATTCAAGAGCTGTGTCCAAGAAACCATCACAGGTTTCACCTCCGCGTGCTAGATCTGTGGTTGCAGAAAGACCTGGAAGAATGAGCTCTAAATCTTCGCCTAAATCAGAACCTATTCAAAAACCAAAAAAATCACTTAGTCCTGTAAGGAATAGCGTTAACATTAATGCAATGAAGGAGGCGTCTCCCAAAACAGCAAAACAAAATGTAGACCCAGTGAATCAACAACCCCAGCAATTAATTTCGGAATCACAAGATCCAGCAACAAGAGTAAGGGAACTTTACGAGAAAATTCAAAAGCAACAATTACTTCAAATGGCTAGTTTAGTGGAAAAGCAGAAAAGGGAACAACAATTGCTTCAACAGGTCTTTGAAGATCAGAATAACTTGTTGTACAAGCAACTTAAAATGATAAGCCCTAAATCACCAATTGAAATCAAAGAGGAGAGTAATCAAGATGTTTCGAATAAACCAGTTAGTTTAAGTCAGTTGATCAACCCTAAATCGCCTGAAATTATTTCATACGATAGCTCTGTATCATCTACTCTTACCGACACAAACAACTACATCAATCGTTGCGAAGATATATTAAGACAAAGCAGAGATATAACTGGGAGTATTAAGAAGCAAAATGGAACAAAAACGCAGTCACCTAGACCTGATTCGGAAGGTAGTAGAACCAGAACTCACTCTCCAAGTCGCAGGAGTACATCCAGAAAGCTGAATTATGACACTAGCGCGTCGTCTGATCGCGATTACGAACAAATACTGACAGATCGAACGAACGATACGATGGCGGACTTAAACGTCACCTTCCCTTCTGACAACAGCGAAGAATTCAATTACAATAATACAGTTTTGAATCACATGTGCGGCGTGGAAGTAAACGTTACCGCAACTCATACTCCTAGATCCAGAGAGGGTGCTATCAGGAGTATGGACCATACTCTTCAAAGTTCGATGTGCGCATTACGGAAGCCCAAATCCAAAATTATCAATAGTCAGCCCACAGCCAGAGAGAGGGCTGCGGCCACGAAGATTGTTTCGTACGCCAAGGGCTATCTCGTTCGGCGTCTGATGAGGACCGAGCGGGTCCGGGGCATCGTGCAGACGATCAAGGACGCCCTGCTGTGCGCCCTGCAACTCCACCAGGAGAGGGAGGGCATCAGGGGAGCGGACGTGGATCTGCACCGACGGCTCATACAGCAGATCACTGCAGCTTGTTACTCGTTACACGACACCTTCATAACGAGCAGTCCGTCGGAGAGGTGCGCCATGATCGCCGCCGATCGCAAGAGGAAGGCTCTCGCCAACCGCCCCTCGCCCAGGCCCTTCAGACAAACGGACATCATGTCGCAAAGCCACACCGGCGCGTTCCCGACTCGCTACAAACGCGCACCCGGAGCGGCGGTCATGACACAGTCCCACTATGGTAACACCGACTAA
Protein
MNDPWDVKSVRQSGQYVSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKRISLLQPYIAESESESSEDRTDAPEIPESEEIQTECKITSVLSDEVYEKALKESPKAQPNVCNTINSSVTVLERTKSPKFRIDLNLNISGTAKNFLDKDTETIRCISEPVELPERDYDCNKVNVKRQAIEFEDINNDKTVAKLNFIIGSDKNVEEPFPDLPSAQDGPPSLSSKSFTGSLNDIHTDSLKESQIVPKLTRQRSYTLLKPSPQLLAHLEVESLNTGVEMSCISMSESLSNLSAPNKKRRSWDLETAKVKWSSMAMELKQKNVSKTSSLNCVNRVNNSRAVSKKPSQVSPPRARSVVAERPGRMSSKSSPKSEPIQKPKKSLSPVRNSVNINAMKEASPKTAKQNVDPVNQQPQQLISESQDPATRVRELYEKIQKQQLLQMASLVEKQKREQQLLQQVFEDQNNLLYKQLKMISPKSPIEIKEESNQDVSNKPVSLSQLINPKSPEIISYDSSVSSTLTDTNNYINRCEDILRQSRDITGSIKKQNGTKTQSPRPDSEGSRTRTHSPSRRSTSRKLNYDTSASSDRDYEQILTDRTNDTMADLNVTFPSDNSEEFNYNNTVLNHMCGVEVNVTATHTPRSREGAIRSMDHTLQSSMCALRKPKSKIINSQPTARERAAATKIVSYAKGYLVRRLMRTERVRGIVQTIKDALLCALQLHQEREGIRGADVDLHRRLIQQITAACYSLHDTFITSSPSERCAMIAADRKRKALANRPSPRPFRQTDIMSQSHTGAFPTRYKRAPGAAVMTQSHYGNTD

Summary

Interpro
IPR033207   CCP110        + More
IPR000048   IQ_motif_EF-hand-BS       

Ontologies

Topology

Length:
815
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01741
Exp number, first 60 AAs:
0.01684
Total prob of N-in:
0.00092
outside
1  -  815
 
 

Population Genetic Test Statistics

Pi
21.576448
Theta
20.621714
Tajima's D
-2.07405
CLR
0.53717
CSRT
0.00939953002349883
Interpretation
Uncertain
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