Gene

KWMTBOMO04803

Pre Gene Modal

BGIBMGA009839

Annotation

PREDICTED:_protein_singed_wings_2_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr8(-):15442059-15486471      View in EpiBrowser

Full name

Protein halfway       + More
XK-related protein      

Alternative Name

Protein singed wings

Location in the cell

PlasmaMembrane   Reliability : 1.684

CDS

ATGTATCTAGCGACATTCCTGCCGTGCATCGAGATGCGGGTTGATGACTTCGACCAGCCCGCACCCAGAGAGCAACCTCCACCGCCGACAGTTCTCCCGGAGCCGATAGAACAGTACTTAAACCTGGGAATATGCTTCCATATGAATCGTTCGTCTTGCCCGCCGAAGGGCGTCTGCACGACCCTAGGGCCCGGCAACATGTCCGTCTTCTGCTGCGATATGGACACTAACTTCTTGAAGGAGTTTCTGCCTGGTATATTGAAACAGAATAAGACGCATCTACACGTGCTGAATGCGACCATCGATGAGCTGGACGTCTCCCACTCCATGTTCAGAAGGCTTACGTCAATGGCGTTTACCGACGGAAATATCAGTAAAATTATTGGTCAGTTCCCGAAGCACTCAGCGCTGGCCTGTTTCAACATATCCAACAACAACTTGACGAGCGACAAGCTGCAGTCTTCGATTCAGAGGCCGTTCGCGTATCTCTTTAACCTGACGGTCCTGGATGCCTCAGCGAACAACCTCACAAAGTTCCCGCTGAGTTTGGTCCACAGCAATAGGAACATATCTGTGGATTTGGCAGGTAACAACTATCTGCCGTGCAAACACTTCCAGAAAGTGATGGAGACGACCAACAGCTCTCTTGTTCACTTCCTCCAGTACAACAAGACCTTCTGCGCTTTGGATCTCAGCTTCAACTGGTTCAAAGACGTCAGCTTCGTGAACATAGACCTTATTAAAATACAGAAAATGATGAATGAGAGATGCCGCGAGATAATACCAGCTGACATCAACTGCACCTGCGCCCCGGAGCGCCTGGAGATCATCGAGAACGAGGTCACCAACCTGGTCTCGGTGGACTGCGCCGAGAGGCAGCTCAAGGAGATGCCGACAAATCTGCCGCCCAATACTGTCAAGTTGAACGTGTCTTTTAATAATATAACATCTCTTGAGGCGGTCGGCGCGGATGAGAGCTACGGACATCTGCGGCAGCTGATCGTGGACTACAACGACATTCCGAATATTCTAGAACTCGAGGGAACGAAGTTCATCGGGAATTTCATGCTCTTCTCGATCGCACATAACAAACTGAAGACTATTCATACGTACGTCTTGTCAAATAGTTTTGAAACGACCGGACCTGCTTTGTCTATAGCGGGAAACTTCATTCACTGCGACTGCAACACCGAGAAGACATTGAAGCCATGGCTATTAGAAAATTTCAAGAGCGTACCGGATTACAAAAGCCTGGAATGCCAGGATGGGCTAGGTCCGGTGGTGGACCTGGTGGAATCTCGCGTCTGCCACACGCCCAGAGATTGGACAGACTACATTTACTACATTATAGGCCTAGAAGTGTTAGTTTTAGTGCTTCTAATCAGCAAAGTATCTTATGACTATTGGGTTTTCAAGACGGCTGGTTATTTGCCGTGGCCTGCGAATAAAATGCCGAGGTTGCCGTGTGATTGGCTCTGCGAGTGA

Protein

MYLATFLPCIEMRVDDFDQPAPREQPPPPTVLPEPIEQYLNLGICFHMNRSSCPPKGVCTTLGPGNMSVFCCDMDTNFLKEFLPGILKQNKTHLHVLNATIDELDVSHSMFRRLTSMAFTDGNISKIIGQFPKHSALACFNISNNNLTSDKLQSSIQRPFAYLFNLTVLDASANNLTKFPLSLVHSNRNISVDLAGNNYLPCKHFQKVMETTNSSLVHFLQYNKTFCALDLSFNWFKDVSFVNIDLIKIQKMMNERCREIIPADINCTCAPERLEIIENEVTNLVSVDCAERQLKEMPTNLPPNTVKLNVSFNNITSLEAVGADESYGHLRQLIVDYNDIPNILELEGTKFIGNFMLFSIAHNKLKTIHTYVLSNSFETTGPALSIAGNFIHCDCNTEKTLKPWLLENFKSVPDYKSLECQDGLGPVVDLVESRVCHTPRDWTDYIYYIIGLEVLVLVLLISKVSYDYWVFKTAGYLPWPANKMPRLPCDWLCE

Description

Has a role in the ecdysone induced cascade; probably indirect control of 'late' ecdysone genes.

Similarity

Belongs to the XK family.

Keywords

Complete proteome   Glycoprotein   Leucine-rich repeat   Reference proteome   Repeat   Signal  

Feature

chain  Protein halfway

Uniprot

H9JJY8   A0A194PQQ2   A0A2A4K2Q9   A0A194RC94   A0A212FHE2   A0A0L7LH14   + More
A0A1Y1L4U5   A0A154NYM4   A0A0L7QS60   A0A088A3M8   A0A026WVP7   D6WG70   A0A224XPH9   A0A2A3E3B6   F4WY96   A0A195CBK6   A0A0J7LBB5   A0A158NHT1   E2AZQ3   N6U0I1   A0A151WR23   E9JB79   A0A195AWR4   A0A0C9RWF5   A0A195FEM7   E2B7P6   A0A1L8DLN0   A0A1L8DLB6   K7J9I7   P84329   A0A0R3P373   A0A195EGB8   A0A0K8UZE7   A0A0K8W957   A0A034V515   R4G331   A0A3B0KJT8   A0A1B0CQ16   B4NCS9   B4PY46   B6IDK2   Q9W568   W8B2N7   B3MYL4   Q16Q64   B3P9K6   A0A1W4VSJ5   A0A2K8JMM7   A0A0L0C549   A0A2S2Q2U7   B4JLV9   A0A067RSI5   A0A2J7Q357   A0A1I8MN61   T1PH04   B4MB41   B4GTJ2   A0A0M4F7J0   A0A182GP64   J9KP37   A0A2H8TTP1   W5JNE4   A0A2M3Z3L0   A0A1I8PL79   A0A1B6DF92   A0A2S2PCE1   A0A2M4BHT4   A0A2M4BH40   A0A2M4BH32   A0A182WW52   A0A182U7C5   A0A182IA38   A0A2M4AS55   Q7QFP4   A0A2M4ASB7   A0A0A9Z1P9   A0A182UZW7   A0A182RES2   A0A182JVS7   A0A182W4E0   A0A182Y7M7   A0A084VV31   A0A182P1N5   A0A182N060   A0A182QDG3   A0A1A9ZLN7   R4WJ71   A0A1B0FI07   A0A1A9UUZ2   A0A182FJS9   A0A182J881   B4L770   A0A0Q9XPZ9   A0A182M327   A0A0M9A889   F0JAN4  

Pubmed

19121390    26354079    22118469    26227816    28004739    24508170    + More
30249741    18362917    19820115    21719571    21347285    20798317    23537049    21282665    20075255    15632085    15189568    17994087    25348373    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    10731137    12537569    17893096    19349973    24495485    17510324    26108605    24845553    25315136    26483478    20920257    23761445    12364791    14747013    17210077    25401762    26823975    25244985    24438588    23691247   

EMBL

BABH01026699    BABH01026700    KQ459595    KPI95776.1    NWSH01000260    PCG77932.1    + More
KQ460367    KPJ15463.1    AGBW02008504    OWR53160.1    JTDY01001177    KOB74644.1    GEZM01064590    JAV68703.1    KQ434783    KZC04723.1    KQ414758    KOC61472.1    KK107109    QOIP01000008    EZA59164.1    RLU19156.1    KQ971320    EFA00539.1    GFTR01006495    JAW09931.1    KZ288403    PBC26217.1    GL888439    EGI60853.1    KQ978023    KYM98080.1    LBMM01000040    KMR05202.1    ADTU01016037    GL444277    EFN61032.1    APGK01047050    KB741077    KB632384    ENN74081.1    ERL94212.1    KQ982813    KYQ50258.1    GL770938    EFZ09931.1    KQ976725    KYM76611.1    GBYB01011310    GBYB01012126    GBYB01012127    JAG81077.1    JAG81893.1    JAG81894.1    KQ981636    KYN38853.1    GL446201    EFN88259.1    GFDF01006820    JAV07264.1    GFDF01006821    JAV07263.1    AAZX01012840    AAZX01019089    CH379063    KRT06077.1    KQ978957    KYN27283.1    GDHF01020267    JAI32047.1    GDHF01004929    JAI47385.1    GAKP01020571    JAC38381.1    ACPB03020356    GAHY01002046    JAA75464.1    OUUW01000011    SPP86759.1    AJWK01022922    CH964239    EDW82638.2    CM000162    EDX00919.1    BT050442    AE014298    ACJ13149.1    AGB94981.1    AJ626646    AL021726    AY070931    AAF45654.3    AAL48553.1    CAA16810.1    CAF25166.1    GAMC01015252    JAB91303.1    CH902632    EDV32708.1    CH477759    EAT36542.1    CH954183    EDV45502.1    KY031173    ATU82924.1    JRES01000902    KNC27395.1    GGMS01002777    MBY71980.1    CH916371    EDV91720.1    KK852488    KDR22774.1    NEVH01019069    PNF23031.1    KA648046    AFP62675.1    CH940655    EDW66450.2    CH479190    EDW25862.1    CP012528    ALC48175.1    JXUM01014868    JXUM01014869    JXUM01014870    JXUM01014871    JXUM01014872    KQ560415    KXJ82525.1    ABLF02011290    ABLF02035754    ABLF02063648    GFXV01005772    MBW17577.1    ADMH02000558    ETN65887.1    GGFM01002360    MBW23111.1    GEDC01020848    GEDC01012951    JAS16450.1    JAS24347.1    GGMR01014239    MBY26858.1    GGFJ01003227    MBW52368.1    GGFJ01003229    MBW52370.1    GGFJ01003228    MBW52369.1    APCN01001102    GGFK01010315    MBW43636.1    AAAB01008846    EAA06520.4    EGK96403.1    GGFK01010339    MBW43660.1    GBHO01038385    GBHO01038384    GBHO01038383    GBHO01038381    GBHO01007874    GBRD01001069    GDHC01012491    JAG05219.1    JAG05220.1    JAG05221.1    JAG05223.1    JAG35730.1    JAG64752.1    JAQ06138.1    ATLV01017149    KE525157    KFB41825.1    AXCN02001308    AK417525    BAN20740.1    CCAG010009519    AXCP01008108    CH933812    EDW06216.2    KRG07186.1    AXCM01001777    KQ435724    KOX78486.1    BT126076    ADY17775.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000007151    UP000037510    + More
UP000076502    UP000053825    UP000005203    UP000053097    UP000279307    UP000007266    UP000242457    UP000007755    UP000078542    UP000036403    UP000005205    UP000000311    UP000019118    UP000030742    UP000075809    UP000078540    UP000078541    UP000008237    UP000002358    UP000001819    UP000078492    UP000015103    UP000268350    UP000092461    UP000007798    UP000002282    UP000000803    UP000007801    UP000008820    UP000008711    UP000192221    UP000037069    UP000001070    UP000027135    UP000235965    UP000095301    UP000008792    UP000008744    UP000092553    UP000069940    UP000249989    UP000007819    UP000000673    UP000095300    UP000076407    UP000075902    UP000075840    UP000007062    UP000075903    UP000075900    UP000075881    UP000075920    UP000076408    UP000030765    UP000075885    UP000075884    UP000075886    UP000092445    UP000092444    UP000078200    UP000069272    UP000075880    UP000009192    UP000075883    UP000053105   

PRIDE

H9JJY8    Q9W568    F0JAN4   

Pfam

PF13855   LRR_8        + More
PF00035   dsrm
PF01462   LRRNT
PF00636   Ribonuclease_3
PF09815   XK-related
PF14622   Ribonucleas_3_3

Interpro

IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt       
IPR000372   LRRNT       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR014720   dsRBD_dom       
IPR011907   RNase_III       
IPR018629   XK-rel       
IPR036389   RNase_III_sf       
IPR020846   MFS_dom       
IPR000999   RNase_III_dom       

SUPFAM

SSF69065   SSF69065       

Gene 3D

3.80.10.10     1.10.1520.10    

CDD

cd00048  DSRM
cd06174  MFS
cd00593  RIBOc

ProteinModelPortal

H9JJY8   A0A194PQQ2   A0A2A4K2Q9   A0A194RC94   A0A212FHE2   A0A0L7LH14   + More
A0A1Y1L4U5   A0A154NYM4   A0A0L7QS60   A0A088A3M8   A0A026WVP7   D6WG70   A0A224XPH9   A0A2A3E3B6   F4WY96   A0A195CBK6   A0A0J7LBB5   A0A158NHT1   E2AZQ3   N6U0I1   A0A151WR23   E9JB79   A0A195AWR4   A0A0C9RWF5   A0A195FEM7   E2B7P6   A0A1L8DLN0   A0A1L8DLB6   K7J9I7   P84329   A0A0R3P373   A0A195EGB8   A0A0K8UZE7   A0A0K8W957   A0A034V515   R4G331   A0A3B0KJT8   A0A1B0CQ16   B4NCS9   B4PY46   B6IDK2   Q9W568   W8B2N7   B3MYL4   Q16Q64   B3P9K6   A0A1W4VSJ5   A0A2K8JMM7   A0A0L0C549   A0A2S2Q2U7   B4JLV9   A0A067RSI5   A0A2J7Q357   A0A1I8MN61   T1PH04   B4MB41   B4GTJ2   A0A0M4F7J0   A0A182GP64   J9KP37   A0A2H8TTP1   W5JNE4   A0A2M3Z3L0   A0A1I8PL79   A0A1B6DF92   A0A2S2PCE1   A0A2M4BHT4   A0A2M4BH40   A0A2M4BH32   A0A182WW52   A0A182U7C5   A0A182IA38   A0A2M4AS55   Q7QFP4   A0A2M4ASB7   A0A0A9Z1P9   A0A182UZW7   A0A182RES2   A0A182JVS7   A0A182W4E0   A0A182Y7M7   A0A084VV31   A0A182P1N5   A0A182N060   A0A182QDG3   A0A1A9ZLN7   R4WJ71   A0A1B0FI07   A0A1A9UUZ2   A0A182FJS9   A0A182J881   B4L770   A0A0Q9XPZ9   A0A182M327   A0A0M9A889   F0JAN4  

PDB

2XOT     E-value=0.000292106,     Score=106

KEGG

101744451    no KO assigned | (RefSeq) protein halfway

GO

GO:0016021   GO:0035075   GO:0035556   GO:0035073   GO:0003723   GO:0016075   GO:0004525   GO:0006396  

Subcellular location

Membrane  

Length:

494

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

13.93792

Exp number, first 60 AAs:

4e-05

Total prob of N-in:

0.02019

outside

1  -  494

 

 

Pi

22.445251

Theta

19.729101

Tajima's D

0.378018

CLR

0.582274

CSRT

0.483025848707565

Interpretation

Uncertain