Gene

KWMTBOMO04801

Pre Gene Modal

BGIBMGA009907

Annotation

broad-complex_isoform_Z4_[Bombyx_mori]

Location

Bomo_Chr8(+):15383132-15412386      View in EpiBrowser

Transcription factor

ZBTB

Location in the cell

Nuclear   Reliability : 3.896

CDS

ATGGTGGACAGTCAGACGCAACACTTCTGTCTCCGATGGAACAACTACCAGCGCAGTATTACCAGCGCCTTCGAGAACCTTCGCGACGACGAGGACTTCGTCGACGTCACGCTCGCCTGCGACGGGAAAAGCCTCAAAGCTCATAGAGTCGTGCTGTCAGCTTGCAGCCCTTATTTCAGAGAATTATTGAAGTCCACGCCGTGCAAGCATCCAGTGATCGTGCTTCAAGACGTGGCGTACACAGACCTTCACGCCCTGGTCGAGTTCATCTACCACGGCGAGGTCAACGTTCACCAGCACAGCTTGTCCTCATTCCTGAAGACAGCTGAGGTGCTCCGTGTCTCCGGTCTCACACACAATGACGCTGCCCAGGGGCCCCTGCTGCAGACCATGCGGTCGTCAGCAGCTCCGTCACCCCACACGCCACCCCACCCGGCCCACTCTACCCATATACCGCAACCCTACCCTGACAAACTCGAGGAAGCTCTTCTTCAACCCTCATCCAGCATCCCGCCCATGATGCGCCGCATTCCTCTTCCTCCACCGCGACGCATGAGCTCCACTGACAACTCGCCTGACGTCATAAAGCGTCCACGTCACGACAACAACAACACAGAATCCCCACAAATGCACGCCGCCGACTTCTCGACCAAGAACCACTCGATTCTGAACAGCAGGGGTCACGAGCAGGGGAACAACGGAAACGGCATCTCCAATAGCAGCTCGTCACCTTCCCCGAGGCTGATGGACGAAGTGAAAAACGAACCGGTCGACATGATATGCCCTTCCAACCCTGATATAGATCGCTGCACGGATGACACACCGCCGCATACTCATCACCGACCAATCGGAGGTCCACCGTCGCGCAGTAGCTCTGCTGATGCCGAAGACCGCACCCCTCCCCCGCAGCTGCCGCCCTCACCATTCATTCCGCCCCCCGACACGAAGCTCTTCAACCCGTCTAACTCCTACAACTTTACAATGGAGGCACTGGCTCAACACTCGACACTAGCCGGTCTGCAGAGTCCTCTCGCTTCGGACGGAATGGCGAGCACATCTCAAGTGGGTCCCCTGGGCGCGGGCCACCGGTGCGAGGTGTGCGGCAAGCTGCTGTCCACGCGGCTGACCCTCAAGCGCCACACGGAGCAGCAACACCTCCAGCCGCTGCACTCGGCGCGCTGCACGCTCTGCCACAAGGTCTTCCGCACGCTCAACTCGCTCAACAACCACAAGAGCATCTACCACCGTCGCCAGCGCAACCCGCCGCCCCTCTCCCAGCCGCAGAACCTCTCCACTGCGCCGGAGCCCAAACTCAACCCTCCCCACCACAACATCGACTTCTACAAATTCAAAGACCAATTCAATGTCTAA

Protein

MVDSQTQHFCLRWNNYQRSITSAFENLRDDEDFVDVTLACDGKSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAYTDLHALVEFIYHGEVNVHQHSLSSFLKTAEVLRVSGLTHNDAAQGPLLQTMRSSAAPSPHTPPHPAHSTHIPQPYPDKLEEALLQPSSSIPPMMRRIPLPPPRRMSSTDNSPDVIKRPRHDNNNTESPQMHAADFSTKNHSILNSRGHEQGNNGNGISNSSSSPSPRLMDEVKNEPVDMICPSNPDIDRCTDDTPPHTHHRPIGGPPSRSSSADAEDRTPPPQLPPSPFIPPPDTKLFNPSNSYNFTMEALAQHSTLAGLQSPLASDGMASTSQVGPLGAGHRCEVCGKLLSTRLTLKRHTEQQHLQPLHSARCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPEPKLNPPHHNIDFYKFKDQFNV

Uniprot

Q6I7P3   Q6I6N4   O96376   Q6I7P6   Q6I7P4   A0A2A4K1I9   + More
Q65YS6   Q65YS8   Q65YS5   Q65YS7   A0A0N9JMB8   A0A2H1WJP1   A0A194PR34   A0A212FHF8   A0A194RCW9   A0A2A4K1X3   A0A2H4H0V9   A0A3S2L4V6   A0A2A4K105   A0A2H4Z0B6   A0A0L7LT51  

Pubmed

15363856    10394907    15581808    15350615    9808776    26325588    + More
26354079    22118469    26227816   

EMBL

AB113088    BAD24049.1    AB166727    AB166730    AB181191    AB181198    + More
AB219449    BAD23980.1    BAD23982.1    BAD46734.1    BAD46741.1    BAF43563.1    AF032676    AAC78288.1    AB166725    AB113084    AB113085    AB181189    AB181196    BAD23978.1    BAD23983.1    BAD24046.1    BAD46732.1    BAD46739.1    BAF43564.1    AB166726    AB113086    AB113087    AB181190    AB181197    AB201230    BAD23979.1    BAD23981.1    BAD24048.1    BAD46733.1    BAD46740.1    BAF02266.1    BAF43562.1    NWSH01000260    PCG77929.1    AB181194    AB181201    BAD46737.1    BAD46744.1    AB181192    AB181199    BAD46735.1    BAD46742.1    AB181195    AB181202    BAD46738.1    BAD46745.1    AB181193    AB181200    BAD46736.1    BAD46743.1    KT363831    ALG36650.1    ODYU01009108    SOQ53291.1    KQ459595    KPI95772.1    AGBW02008504    OWR53165.1    KQ460367    KPJ15467.1    PCG77928.1    KY006937    ARG47534.1    RSAL01000151    RVE45764.1    PCG77927.1    MG231415    MG753773    AUF40285.1    AVP27100.1    JTDY01000143    KOB78622.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000053240    UP000283053    UP000037510    + More

PRIDE

Q6I7P3    Q6I6N4    Q6I7P6    Q6I7P4    Q65YS6    Q65YS8    + More
Q65YS5    Q65YS7   

Pfam

PF00651   BTB        + More
PF00096   zf-C2H2

Interpro

IPR013087   Znf_C2H2_type        + More
IPR000210   BTB/POZ_dom       
IPR036236   Znf_C2H2_sf       
IPR011333   SKP1/BTB/POZ_sf       

SUPFAM

SSF54695   SSF54695        + More
SSF57667   SSF57667       

ProteinModelPortal

Q6I7P3   Q6I6N4   O96376   Q6I7P6   Q6I7P4   A0A2A4K1I9   + More
Q65YS6   Q65YS8   Q65YS5   Q65YS7   A0A0N9JMB8   A0A2H1WJP1   A0A194PR34   A0A212FHF8   A0A194RCW9   A0A2A4K1X3   A0A2H4H0V9   A0A3S2L4V6   A0A2A4K105   A0A2H4Z0B6   A0A0L7LT51  

PDB

4HXI     E-value=1.38281e-06,     Score=125

KEGG

692523    K02174 broad-complex core protein | (RefSeq) Br-c, Br; broad-complex

PATHWAY

04214    Apoptosis - fly - Bombyx mori (domestic silkworm)
04320    Dorso-ventral axis formation - Bombyx mori (domestic silkworm)

GO

GO:0003676   GO:0005739   GO:0046872   GO:0005515   GO:0008168   GO:0005524   GO:0006000   GO:0006003   GO:0006032   GO:0016742   GO:0003824  

Length:

456

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00022

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00782

outside

1  -  456

 

 

Pi

19.189346

Theta

17.37161

Tajima's D

0.205255

CLR

0.469958

CSRT

0.432778361081946

Interpretation

Uncertain