Gene
KWMTBOMO04797
Annotation
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
Location in the cell
Mitochondrial Reliability : 1.195 Nuclear Reliability : 1.238
Sequence
CDS
ATGGATTGCGTGAATTTTACGCATCCTACCCATGGGCGGTTCTGCTCTGCTGATCCTGACATCTATGCGGACCGTCTTAAAGACGTGGTGCTCCAGGGGATGGAATTGTTTATTCCCTCCTCTGAAGTGCCCGTTGGGGGTCGCAGCAGACCCTGGTATAACAATGCCAGCAGGGATGCTGCACACCTCAAGCGGTCCGCATACGTGGCATGGGATAATGCCAGGAGACGTCGGGATCCTAACATCTCAGGGGAAAGGCGGAAATATAACGCCGCTTCCAGGTCCTACAAGAAGGTAATTGCCAAGGCGAAGTCGGAGCACGTCGCTAGAGTTGGCGAGCGATTGAAGAGCTATCCCTCCGGGAGCCGTGCTTTTTGGTCGCTCGCCAAAGCTGCAGAAGGAAACTTCTGCAGGTCTAGTCTCCCACCACTGCGCAAGTCCGATGACAATCTGGCCCACAGCGTGAAAGAGAAGGCTGACCTTCTGGTCAAACTCTTCGCCTCGAACTCGACTGTGGACGACGGGGGTGCCACACCACCGAACATCCCCCGGGTTCCGTCTTCATGGAAGACCGCCCACGTCCACCCTATCCCCAAGAAGGGTGACCGGTCGGACCCATCGAGCTATAGGCCTATCGCGATAACTTCCTTGCTTTCCAAGGTGATGGAGCGAATTATAAATATACAACTCCTGAAGTATCTTGAAGATCGCCAGCTGATCAGTGACCGACAGTACGGTTTCCGTCACGGTCGCTCAGCTGGCGATCTTCTTGTATACCTTACTCACAGGTGGGCTGAAGCCTTGGAGAGCAAGGGCGAGGCTCTTGCTGTGAGCCTTGATATCGCGAAGGCCTTTGACAGGGTCTGGCATAGGGCACTTCTATCGAAGTTACCATCTTACGGAATCCCCGAGGGTCTCTGCAAGTGGATCGCTAGCTTTTTGGATGGGCGGAGCATCACGGTCGTTGTAGACGGTGACTGTTCTGATACCATGACCATTAACGCTGGCGTTCCACAAGGTTCGGTGCTCTCCCCCACGCTTTTCATCCTGTATATCAATGACATGCTGTCTATTGATGGCATGCATTGCTATGCAGATGATAGCACGGGGGATGCGCGATATATCGGCCATCAGAGTCTCTCTCGGAGCGTGGTGCAAGAGAGACGATCAAAACTTGTGTCTGAAGTGGAGAACTCTCTGGGGCGAGTCTCCGAATGGGGTGAATTGAACTTGGTTCAATTCAACCCGATAAAGACACAAGTTTGCGCGTTCACTGCGAAGAAGGACCCCTTTGTCATGGCGCCGCAATTCCAAGGAGTATCCCTGCAACCTTCCGAGAGTATCGGGATACTTGGGGTCGACATTTCGAGCGATGTCCAGTTTCGGAGTCATTTGGAAGGCAAAGCCAAGTTGGCGTCCAAAATGCTGGGAGTCCTCAACAGAGCGAACAGAGGAAGAGAAAGCGACTCAGTAGAGATTTCTTCAATAGGCAATGCATGGAAATGCATGGACGCCCAGTTTTCTATTGAAGCAACTAAAATCTTTAAAAAAGCAAAAGAATCACCTAAACGTAAACCTCTGAAACAGGCATGA
Protein
MDCVNFTHPTHGRFCSADPDIYADRLKDVVLQGMELFIPSSEVPVGGRSRPWYNNASRDAAHLKRSAYVAWDNARRRRDPNISGERRKYNAASRSYKKVIAKAKSEHVARVGERLKSYPSGSRAFWSLAKAAEGNFCRSSLPPLRKSDDNLAHSVKEKADLLVKLFASNSTVDDGGATPPNIPRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRVSEWGELNLVQFNPIKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRANRGRESDSVEISSIGNAWKCMDAQFSIEATKIFKKAKESPKRKPLKQA
Summary
Uniprot
Pubmed
EMBL
Proteomes
Interpro
IPR000477
RT_dom
+ More
IPR036691 Endo/exonu/phosph_ase_sf
IPR000832 GPCR_2_secretin-like
IPR005135 Endo/exonuclease/phosphatase
IPR017981 GPCR_2-like
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR000504 RRM_dom
IPR034653 SPF45_RRM
IPR003954 RRM_dom_euk
IPR000467 G_patch_dom
IPR040052 RBM17
IPR035979 RBD_domain_sf
IPR036691 Endo/exonu/phosph_ase_sf
IPR000832 GPCR_2_secretin-like
IPR005135 Endo/exonuclease/phosphatase
IPR017981 GPCR_2-like
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR000504 RRM_dom
IPR034653 SPF45_RRM
IPR003954 RRM_dom_euk
IPR000467 G_patch_dom
IPR040052 RBM17
IPR035979 RBD_domain_sf
Gene 3D
ProteinModelPortal
PDB
6AR3
E-value=7.16716e-06,
Score=120
Ontologies
PANTHER
Topology
Length:
530
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01994
Exp number, first 60 AAs:
0.00014
Total prob of N-in:
0.00265
outside
1 - 530
Population Genetic Test Statistics
Pi
18.011523
Theta
22.449632
Tajima's D
-0.770778
CLR
37.504415
CSRT
0.184290785460727
Interpretation
Uncertain
