Gene

KWMTBOMO04789  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009841

Annotation

PREDICTED:_mitochondrial_matrix_protein_p33_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr8(-):15002031-15009656      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.099 Mitochondrial   Reliability : 1.114

CDS

ATGAGCGGCATAGTTAAAGCGACCCATAGAGTGCTGCAAACATGCGTTAAAACTGCGAACTTAAGCGGGTTGGTTAGTCGCACACAGACGGCTGTGAAACGCGACTTTACTAGGGGTATATGGCACATGAGCTGCTCTCGAAGGTTAGATGGGACCCTGGCTTCCACCAGCTTGCTACACAACCATTCCAATACTTGCAGCTGCGGCTGCGGGTTGAAGGCGCTTCACACGAAAGGTGAAAGAGAACTGGTAGAGTTCCTGACAGAAGAAATAGTTGCTGAACGCAAAGCACAGAAGGTCAAGTCTCTCCCTGCTGAAGTCGAAGGCTTTACTGTAAAGGGAGACGGTGCTGAAGTTGTTTTAACAAAGCAGCTTAAAGATGAAACAATTCGTGTCACATTCAACGTTAATCACACTGTGGACTCTGATGACTTTGAGGGTGATGTTCAGACTGAGAAGCAAGAGTTCTCTGAGATGCGTTCCAAACCTCAGTTTGAGGTTGACCTAGTCCGAGGAGACACCACCCTTGGTTTCACCTGCTCCTATCTTCAAGATCCACCTGCAGCTTCTGCTGATGAATATAACGATGTGTTCGGCATTGACGAAATAACCCTATATAAGGGTGAATGGAATGACAAAGTGTATGCAGTCGCTGGTGATGTGCTCGATGGGTATTTGTACGACCTACTCATGAACCTACTAGAAGAGAAGGGCATAAGCAATGAATTCGCGCAGAAGCTGTCGGACTTCAGTACTGCCTACGAGCACACGGCGTACATCAATCTTCTGGAGTCCATATCTAAATTCACCATCGGAAAATAA

Protein

MSGIVKATHRVLQTCVKTANLSGLVSRTQTAVKRDFTRGIWHMSCSRRLDGTLASTSLLHNHSNTCSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQDPPAASADEYNDVFGIDEITLYKGEWNDKVYAVAGDVLDGYLYDLLMNLLEEKGISNEFAQKLSDFSTAYEHTAYINLLESISKFTIGK

Uniprot

Q2F5P7   Q2F5P6   I4DJV4   A0A2A4JR39   I4DL90   A0A2H1VGS2   + More
A0A194PS24   A0A0N1INI2   A0A212EV63   A0A0L0BQZ8   A0A0L7KW28   Q1HR26   A0A1S4FSN6   A0A0A1XRS1   A0A1B0D3F2   A0A1I8PT11   A0A034VZ40   A0A034VY66   A0A0K8TLA8   W8BPE6   A0A0K8U796   A0A1I8M7C2   A0A1A9ZAH6   T1PHT9   A0A1L8EDH7   A0A1A9YCY2   D3TLR5   A0A1B0BRW2   A0A1B0FHU4   A0A336M6W5   A0A336KYK4   B4KMZ8   T1D6F6   B0WPP0   A0A1A9UI95   B4MRZ7   B4LNA3   A0A1L8E2Y3   A0A067R160   R4UJ61   A0A0M4EW56   B4J787   B4P559   A0A1W4VCH4   A0APE6   A0A2J7R7J6   Q7JXC4   A0A0J9RF97   V5I9V3   A0APE4   B3MIE9   B4HMY6   A0APF0   D1GYM5   A0A0T6AYW1   D1GYM7   D1GYM3   D1GZ05   J3JXM0   D1GZ36   A0A1B6LSE6   A0A0M8ZVE5   N6T931   A0A1B6GSV1   A0A1B6IDI3   A0A2P8XJP2   A0A182F837   B3NML3   A0A0L7R1I1   T1DQC4   A0A2M4AJD6   A0A182QRU6   A0A1J1IM29   A0A2M4BWY1   A0A154PHD6   A0A2M4AH41   A0A2M4AHM2   W5J7Q5   A0A182VXN5   A0A2M3Z7I2   A0A1J1IQC7   A0A2M3Z7M2   A0A3B0J1H1   A0A2M3Z7W7   A0A182MDF8   A0A182N6G3   A0A088A0G9   A0A1Y9HEQ7   Q28Z43   B4GIA9   B4QBB9   A0A084W5B7   A0A1B6CV40   A0A182PF22   A0A182YIF2   A0A182XH52   A0A182KES2   A0A182I8A0   A0A182KMR6   D2CFW8  

Pubmed

19121390    22651552    26354079    22118469    26108605    26227816    + More
17204158    17510324    25830018    25348373    26369729    24495485    25315136    20353571    17994087    24330624    24845553    17550304    16951084    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    19126864    26109357    26109356    22936249    18057021    22516182    23537049    29403074    20920257    23761445    15632085    24438588    25244985    20966253    18362917    19820115   

EMBL

DQ311376    ABD36320.1    BABH01026664    BABH01026665    BABH01026666    DQ311377    + More
ABD36321.1    AK401572    BAM18194.1    NWSH01000843    PCG73880.1    AK402058    BAM18680.1    ODYU01002484    SOQ40026.1    KQ459595    KPI95763.1    KQ461192    KPJ07056.1    AGBW02012233    OWR45382.1    JRES01001589    KNC21664.1    JTDY01005143    KOB67330.1    DQ440268    CH477726    ABF18301.1    EAT36844.1    GBXI01000692    JAD13600.1    AJVK01023516    GAKP01012144    JAC46808.1    GAKP01012147    JAC46805.1    GDAI01002499    JAI15104.1    GAMC01003530    JAC03026.1    GDHF01029861    GDHF01013076    GDHF01008224    GDHF01005213    GDHF01003433    JAI22453.1    JAI39238.1    JAI44090.1    JAI47101.1    JAI48881.1    KA647690    AFP62319.1    GFDG01002019    JAV16780.1    EZ422367    ADD18643.1    JXJN01019356    CCAG010015795    UFQT01000643    SSX26042.1    UFQS01001157    UFQT01001157    SSX09288.1    SSX29190.1    CH933808    EDW09920.1    GALA01000078    JAA94774.1    DS232027    EDS32443.1    CH963850    EDW74886.1    CH940648    EDW61055.1    GFDF01000981    JAV13103.1    KK853008    KDR12558.1    KC632270    AGM32084.1    CP012524    ALC41970.1    CH916367    EDW02105.1    CM000158    EDW91760.1    AM294534    CAL26517.1    NEVH01006732    PNF36786.1    AE013599    AY094810    AM294527    AM294528    AM294529    AM294530    AM294531    AM294533    AM294535    AM294536    AM294537    FM245592    FM245593    FM245594    FM245595    FM245596    FM245597    FM245598    FM245599    FM245600    FM245601    AAF57817.1    AAM11163.1    CAL26506.1    CAL26510.1    CAL26511.1    CAL26512.1    CAL26514.1    CAL26516.1    CAL26518.1    CAL26519.1    CAL26520.1    CAR93518.1    CAR93519.1    CAR93520.1    CAR93521.1    CAR93522.1    CAR93523.1    CAR93524.1    CAR93525.1    CAR93526.1    CAR93527.1    CM002911    KMY94647.1    GALX01002285    JAB66181.1    AM294532    CAL26515.1    FN546610    FN546611    FN546613    FN546615    FN546617    FN546619    FN546620    CH902619    CBE66909.1    CBE66910.1    CBE66912.1    CBE66914.1    CBE66916.1    CBE66918.1    CBE66919.1    EDV36997.1    CH480816    EDW48336.1    AM294538    CAL26521.1    FN546614    CBE66913.1    LJIG01022490    KRT80300.1    FN546616    FN546618    CBE66915.1    CBE66917.1    FN546612    CBE66911.1    FN546744    CBE67043.1    BT127989    KB632230    AEE62951.1    ERL90385.1    FN546775    CBE67074.1    GEBQ01013355    JAT26622.1    KQ435863    KOX70403.1    APGK01039323    KB740969    ENN76744.1    GECZ01004346    JAS65423.1    GECU01022734    JAS84972.1    PYGN01001907    PSN32221.1    CH954179    EDV54952.1    KQ414667    KOC64698.1    GAMD01002614    JAA98976.1    GGFK01007563    MBW40884.1    AXCN02000286    CVRI01000055    CRL01303.1    GGFJ01008449    MBW57590.1    KQ434905    KZC11217.1    GGFK01006782    MBW40103.1    GGFK01006787    MBW40108.1    ADMH02002112    ETN58839.1    GGFM01003735    MBW24486.1    CRL01302.1    GGFM01003761    MBW24512.1    OUUW01000001    SPP75054.1    GGFM01003872    MBW24623.1    AXCM01004698    CM000071    EAL25772.1    CH479183    EDW36229.1    CM000362    EDX07543.1    ATLV01020573    KE525303    KFB45411.1    GEDC01021070    GEDC01019942    JAS16228.1    JAS17356.1    APCN01002684    DS497670    EFA13033.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037069    + More
UP000037510    UP000008820    UP000092462    UP000095300    UP000095301    UP000092445    UP000092443    UP000092460    UP000092444    UP000009192    UP000002320    UP000078200    UP000007798    UP000008792    UP000027135    UP000092553    UP000001070    UP000002282    UP000192221    UP000235965    UP000000803    UP000007801    UP000001292    UP000030742    UP000053105    UP000019118    UP000245037    UP000069272    UP000008711    UP000053825    UP000075886    UP000183832    UP000076502    UP000000673    UP000075920    UP000268350    UP000075883    UP000075884    UP000005203    UP000075900    UP000001819    UP000008744    UP000000304    UP000030765    UP000075885    UP000076408    UP000076407    UP000075881    UP000075840    UP000075882    UP000007266   

PRIDE

Q2F5P7    Q2F5P6    A0APE6    Q7JXC4    A0APE4    A0A088A0G9    + More

Pfam

PF02330   MAM33        + More
PF00650   CRAL_TRIO
PF03567   Sulfotransfer_2

Interpro

IPR003428   MAM33        + More
IPR036561   MAM33_sf       
IPR005331   Sulfotransferase       
IPR027417   P-loop_NTPase       
IPR001251   CRAL-TRIO_dom       
IPR011074   CRAL/TRIO_N_dom       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR036865   CRAL-TRIO_dom_sf       
IPR007734   Heparan_SO4_2-O-STrfase       

SUPFAM

SSF54529   SSF54529        + More
SSF52087   SSF52087       
SSF46938   SSF46938       
SSF52540   SSF52540       

Gene 3D

3.10.280.10     3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

Q2F5P7   Q2F5P6   I4DJV4   A0A2A4JR39   I4DL90   A0A2H1VGS2   + More
A0A194PS24   A0A0N1INI2   A0A212EV63   A0A0L0BQZ8   A0A0L7KW28   Q1HR26   A0A1S4FSN6   A0A0A1XRS1   A0A1B0D3F2   A0A1I8PT11   A0A034VZ40   A0A034VY66   A0A0K8TLA8   W8BPE6   A0A0K8U796   A0A1I8M7C2   A0A1A9ZAH6   T1PHT9   A0A1L8EDH7   A0A1A9YCY2   D3TLR5   A0A1B0BRW2   A0A1B0FHU4   A0A336M6W5   A0A336KYK4   B4KMZ8   T1D6F6   B0WPP0   A0A1A9UI95   B4MRZ7   B4LNA3   A0A1L8E2Y3   A0A067R160   R4UJ61   A0A0M4EW56   B4J787   B4P559   A0A1W4VCH4   A0APE6   A0A2J7R7J6   Q7JXC4   A0A0J9RF97   V5I9V3   A0APE4   B3MIE9   B4HMY6   A0APF0   D1GYM5   A0A0T6AYW1   D1GYM7   D1GYM3   D1GZ05   J3JXM0   D1GZ36   A0A1B6LSE6   A0A0M8ZVE5   N6T931   A0A1B6GSV1   A0A1B6IDI3   A0A2P8XJP2   A0A182F837   B3NML3   A0A0L7R1I1   T1DQC4   A0A2M4AJD6   A0A182QRU6   A0A1J1IM29   A0A2M4BWY1   A0A154PHD6   A0A2M4AH41   A0A2M4AHM2   W5J7Q5   A0A182VXN5   A0A2M3Z7I2   A0A1J1IQC7   A0A2M3Z7M2   A0A3B0J1H1   A0A2M3Z7W7   A0A182MDF8   A0A182N6G3   A0A088A0G9   A0A1Y9HEQ7   Q28Z43   B4GIA9   B4QBB9   A0A084W5B7   A0A1B6CV40   A0A182PF22   A0A182YIF2   A0A182XH52   A0A182KES2   A0A182I8A0   A0A182KMR6   D2CFW8  

PDB

1P32     E-value=1.46977e-23,     Score=269

KEGG

692953    K15414 complement component 1 Q subcomponent-binding protein, mitochondrial | (RefSeq) mitochondrial

GO

GO:0005759   GO:0005634   GO:0042393   GO:0007274   GO:0006334   GO:0050848   GO:0035042   GO:0005739   GO:0035041   GO:0006338   GO:0016021   GO:0008146   GO:0070131   GO:0097177   GO:0008494   GO:0003729   GO:0005544   GO:0003873   GO:0005524   GO:0006000   GO:0006003   GO:0006032   GO:0005515   GO:0016742   GO:0003824  

PANTHER

PTHR10826   PTHR12129  

Length:

273

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00316

Exp number, first 60 AAs:

0.00079

Total prob of N-in:

0.09869

outside

1  -  273

 

 

Pi

22.60431

Theta

18.145384

Tajima's D

-1.140092

CLR

1.141082

CSRT

0.111344432778361

Interpretation

Uncertain