SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04786
Pre Gene Modal
BGIBMGA008564
Annotation
PREDICTED:_SPRY_domain-containing_SOCS_box_protein_3_[Bombyx_mori]
Full name
Annexin      
Location in the cell
Extracellular   Reliability : 1.922
 

Sequence

CDS
ATGATCAGCTCGACCGCGGCCCAGTCGAGCATGAAGCTGATCTACGCAGCGTCGTGGCAGGCCTCGCTGCTCGTCGACTCGGCCAAGATCCTGGCCGCCTCCGTCAAGAACAGGAGCCTGATGCGCCCGAAACTGCCGCCTGGTCTCTGGCAGACCCTGAGGAGACAATTCTGGCTGACCCTGCCTACTGAAGGTTGTTTCGTTGATGACACCGATGTTGATATAGAACTGGAAGCAGCAAAGGCGATGCCCCTATCATCCGGCATGAAGAGAAAGCACTGGCTGAAGCCGAGCTCAACCTGCCTGTTCCTTCAGAAGAACACAGACAGCAGATGA
Protein
MISSTAAQSSMKLIYAASWQASLLVDSAKILAASVKNRSLMRPKLPPGLWQTLRRQFWLTLPTEGCFVDDTDVDIELEAAKAMPLSSGMKRKHWLKPSSTCLFLQKNTDSR

Summary

Similarity
Belongs to the annexin family.
Pfam
PF00622   SPRY        + More
PF00191   Annexin
Interpro
IPR013320   ConA-like_dom_sf        + More
IPR001870   B30.2/SPRY       
IPR035754   SPRY_SPSB3       
IPR003877   SPRY_dom       
IPR037104   Annexin_sf       
IPR001464   Annexin       
IPR018252   Annexin_repeat_CS       
IPR018502   Annexin_repeat       
SUPFAM
SSF49899   SSF49899       
Gene 3D

Ontologies

Topology

Length:
111
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.76329
Exp number, first 60 AAs:
4.76329
Total prob of N-in:
0.39574
outside
1  -  111
 
 

Population Genetic Test Statistics

Pi
16.04963
Theta
19.80625
Tajima's D
-0.554922
CLR
0.396833
CSRT
0.232488375581221
Interpretation
Uncertain
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