Gene

KWMTBOMO04770

Pre Gene Modal

BGIBMGA009850

Annotation

PREDICTED:_uncharacterized_protein_LOC101743016_[Bombyx_mori]

Location

Bomo_Chr8(-):14506245-14519023      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.826

CDS

ATGGCAAAGGAAATGATGATAGTATTTGTGTACGACACACAATGTTGTACAGCTGAAGAGGATGATCCCATAAATGCTGTGCTGTATTTCCACCCAGGATGGGTGTCTGACACTCAAAGACATGCTCTAGCAGGACAGGTGGTTGGAGCAGCTCATTGCGTCAAAACGTTGCTATCTCCGCCGGTTTCAATCACCCTGCAGAGCGGAAAGTTCATCATCAGAGAATACGGAAGATACGTATTGGCGATAGGCAGCGACCGAAACATCCCAGATTGGGTGTTGAAGAATCGCGCCAACCTCCTGACCTCAATGATCAAAGTGTACCACGGCGACCTGCAGTGCTTGGCCCAGCAAATGGAAGACCAGAAACGGCTCGCCGAGAAACTGTACCAAGTTTTTGAGACTTACCTACCGGTTCTTCAGTACGGGTGCCACATATTCCAGAGGGTTCCAATGCTTAGTCTCCCGAAGAGCGCCACGTCCACTTACATGGAGTCGATGCAGATACTGGAACATTGTCGCAAAAGTACCGGTGTACTCGGCGGCGTAATACTTTACAATAACAAGATCATAGCCACACAGCTGCCCCCGGGTCTGACGTCATACCTCACCGTGGTCGACCCCTACCGGATAAAGTCCCCAGCTGAGACTCTCGAAACCGAAGCTCCCCTGCCGCTGGGGGCTCAGCTCCTCGTTGTGTACGTCAGGAGGAAGCTGTACGACAACCTCAAGAGACAGACTGAGAAATTGCAAGAGTTTTATCAAAACGGAGAAGATATTATTGCCAGGTTCAAAAAGAATCAAGAGGCGGAACGAGAAAGGCAACGTGAGTTCCCCCAGACGGGAATGAAGAGAGACAAGTCGTTACTGTTCACGGCCGTCCCGGAGGAAGACCACACAATGATCTCTCCGCCGAATCGAGAAGAGATCCCCACCGCTGAGCACCGCAAGGCCAGCGTGCCCGACGTGGTCCCGTTCACGAACAAGCCCCGTCCCAGGCCCAACAAGCTCTCGCTGAGCTTCAAGACCCAGCAGTCACTGGACGAAGACGCCAAAGAGAACGATAAAGTTTTCACGGGACAAACCAGCGTGTGCTCCACGCCGATGCTGGAGTACAAGCGCCTCCACGGGAACATGCTCTCCATCTGCCAGAACCCGGACACGAACTACCAAGAGAAGCCGATCGAGCCGGACGTGTTGAAGAACATCGAGAACTGCACGAAGATCAACTTCGACAACGAGAAGCGCGACAACCAAATCGTTCTGGACATGAACTGCATCGCGGACCACTACATCAACAAGCCGCAGCCCATCCGCAAGCCGGCCAGCGTCACGGACATACAGAGCCTCCCCCAGAGAGCCGCGTCCAAGTTCAAGCTGACAAAGTCCCACAACCCCCCGGACGACGACACCCCGTCTCCGGACGTCGACTCGCTGAAGAGCCAGTGCACCATGACGATAACCGATCCGTCCTTCCCGGTGTTCAGGAACGACGGCGTCGCCATATCGGAGTCGCTCTTCAACCAGTACGTGGAACAGTATTATTCGAGAATGAAGCAGGACTCGAAGGAGCCGAACATGTTTTCGTTCAACACGAAGCTGTGCGAGCAAGACAGGTTCGACGACTTCGATTCGGAACTGCACAGGTCTCCGCAGAGGACGCCCAAGAAATTCGCTAAGGATCCCGCCAAATCACTCTCCACAGACCATTCCAGAAGGAAATCTCTCTCGCTGCCGCTGAAGTCTCTATCCGAAAGTTCGGACTCTCAAATCGGCTCTGACTCTGAAGCGACTAGTTTCAAGAAAAAACTCACCGGCGTCCAACTCACTCCCCTGATGGAGAAACTGAGTCATCTAGCATTCTCTGACAAGTCAAGCGGATACAGCAGCAGAGTCATGACGCCTTTAGAACTGAGAGAATTCTCCACTCCGGCCGCAGAGAGGCAGATCACGTTTTGTGATAGGCCAAAAACTCAACGCGTCGAGTGTGATAGCGACGAAGACGACGACCTGGACATTTTACCGGAGTACAGCTCGCATGCCGTTAAGTGCGCCCTGTTCGTTAGTGGACTGCAGAACATGGCGCTGCTGGCGTTACTGGACATTGAGGCCGCGAATGATGCCGATACTATCAATTCACTGTGGGAAACATCCCTGAACGCGTTGGGCCCTATCGAACAGAAGTGCATGGAACCACTCGGAGCGGGCGGCGAGACTTCAGACTACAGCTACCTGCTGTTAGATCCAGACTGGGGAACTGTCAATAAGGGAGGTCCCTGGGCAGCAACAGACATCGCCACTATGGGCCTCATACACAATGACTTCTCCGACGATCCTGAACTCTCCGAACTAATACTAAGGAGCGACGAGAGCGTGGTGGTGGGCGCCAGCAGCGGCGGCGCGGAGGTGTACTACTGCGAGCGGGGCCCGCGCGACGCCGGCCCGCCCCCGCCCTCCGACGCGCTGGCGGCCGCCCCGCTGCGGGCGCGGCGCCGCCTGCACCGGGACCACGCCACGCTGCTGCTCTAA

Protein

MAKEMMIVFVYDTQCCTAEEDDPINAVLYFHPGWVSDTQRHALAGQVVGAAHCVKTLLSPPVSITLQSGKFIIREYGRYVLAIGSDRNIPDWVLKNRANLLTSMIKVYHGDLQCLAQQMEDQKRLAEKLYQVFETYLPVLQYGCHIFQRVPMLSLPKSATSTYMESMQILEHCRKSTGVLGGVILYNNKIIATQLPPGLTSYLTVVDPYRIKSPAETLETEAPLPLGAQLLVVYVRRKLYDNLKRQTEKLQEFYQNGEDIIARFKKNQEAERERQREFPQTGMKRDKSLLFTAVPEEDHTMISPPNREEIPTAEHRKASVPDVVPFTNKPRPRPNKLSLSFKTQQSLDEDAKENDKVFTGQTSVCSTPMLEYKRLHGNMLSICQNPDTNYQEKPIEPDVLKNIENCTKINFDNEKRDNQIVLDMNCIADHYINKPQPIRKPASVTDIQSLPQRAASKFKLTKSHNPPDDDTPSPDVDSLKSQCTMTITDPSFPVFRNDGVAISESLFNQYVEQYYSRMKQDSKEPNMFSFNTKLCEQDRFDDFDSELHRSPQRTPKKFAKDPAKSLSTDHSRRKSLSLPLKSLSESSDSQIGSDSEATSFKKKLTGVQLTPLMEKLSHLAFSDKSSGYSSRVMTPLELREFSTPAAERQITFCDRPKTQRVECDSDEDDDLDILPEYSSHAVKCALFVSGLQNMALLALLDIEAANDADTINSLWETSLNALGPIEQKCMEPLGAGGETSDYSYLLLDPDWGTVNKGGPWAATDIATMGLIHNDFSDDPELSELILRSDESVVVGASSGGAEVYYCERGPRDAGPPPPSDALAAAPLRARRRLHRDHATLLL

Similarity

Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.

Uniprot

H9JJZ9   A0A2H1WTM8   A0A2A4ISF5   A0A3S2LI72   A0A194PX75   A0A0N1I4P2   + More
A0A212ER15   A0A2A4ITY8   A0A0L7LL31   A0A1Y1K6Y7   A0A0M8ZUG7   D7EJH5   A0A154PCZ0   A0A139W8C3   A0A0L7QZ17   F4WEM3   A0A158NF21   A0A0C9RFL7   A0A0C9RN59   A0A1I8MGY0   T1PJ06   A0A1I8MGY5   A0A1I8MGX7   A0A151WHU9   A0A1A9YCY9   A0A195E7Z8   A0A1A9VQB1   A0A195AUY4   A0A1B0FHV8   A0A1A9ZAH1   A0A195FL09   Q16R21   A0A1B0C1U0   A0A0Q5VKQ7   A0A1W4V0Q6   A0A195C456   Q8MT61   A1ZAX6   B3NML6   A0A0R1DS70   A0A1Q3G3P5   A0A1A9WC71   A0A1W4VD16   A0A0J9RFA2   A1ZAX8   A0A0P8XPK7   B4P556   B3MIE5   A0A0A1WJ60   B4QBC2   A0A0J9RFH7   A0A0K8UTM1   B4MRZ3   B4J6C4   A0A1B0D979   B4HMY9   A0A0K8WB22   A0A1I8Q8B8   A0A0K8UP90   A0A1I8Q8F1   A0A1I8Q8B4   A0A026WR63   A0A1B0GIU5   A0A0Q9WEH7   A0A1I8Q8B6   A0A0K8UPT4   B4LM62   A0A1J1I337   A0A0Q9XL59   A0A3B0JJ62   B4KNP5   A0A0M4EUA7   A0A0R3NNN9   Q28Z46   B4GIA6   A0A336M0T0   A0A1Y1JZG2   A0A182Q042   A0A182W3D5  

Pubmed

19121390    26354079    22118469    26227816    28004739    18362917    + More
19820115    21719571    21347285    25315136    17510324    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    22936249    25830018    24508170    15632085   

EMBL

BABH01026625    BABH01026626    ODYU01010969    SOQ56411.1    NWSH01008327    PCG62599.1    + More
RSAL01000005    RVE54380.1    KQ459595    KPI95745.1    KQ461192    KPJ07037.1    AGBW02013148    OWR43938.1    PCG62600.1    JTDY01000710    KOB76135.1    GEZM01096818    JAV54557.1    KQ435840    KOX71400.1    KQ973453    KXZ75527.1    KQ434874    KZC09693.1    KXZ75526.1    KQ414685    KOC63807.1    GL888103    EGI67386.1    ADTU01013709    GBYB01005761    JAG75528.1    GBYB01003711    GBYB01008516    JAG73478.1    JAG78283.1    KA647898    AFP62527.1    KQ983106    KYQ47413.1    KQ979479    KYN21328.1    KQ976736    KYM76053.1    CCAG010015795    KQ981490    KYN41355.1    CH477726    EAT36853.1    JXJN01024172    CH954179    KQS62038.1    KQ978287    KYM95642.1    AY118362    AAM48391.1    AE013599    BT050428    AAG22260.1    ACJ13135.1    EDV54955.1    CM000158    KRK00064.1    GFDL01000659    JAV34386.1    CM002911    KMY94652.1    AAF57814.1    CH902619    KPU76554.1    EDW91757.1    EDV36993.1    GBXI01015591    JAC98700.1    CM000362    EDX07546.1    KMY94650.1    KMY94651.1    GDHF01022270    JAI30044.1    CH963850    EDW74882.2    CH916367    EDW00897.1    AJVK01004272    CH480816    EDW48339.1    GDHF01003921    JAI48393.1    GDHF01023812    JAI28502.1    KK107119    EZA58525.1    AJWK01017657    CH940648    KRF79679.1    GDHF01023791    JAI28523.1    EDW60940.1    CVRI01000035    CRK92785.1    CH933808    KRG05031.1    OUUW01000001    SPP73266.1    EDW10030.1    CP012524    ALC40970.1    CM000071    KRT02532.1    EAL25769.2    CH479183    EDW36226.1    UFQT01000257    SSX22443.1    GEZM01096820    JAV54553.1    AXCN02000234   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    + More
UP000037510    UP000053105    UP000007266    UP000076502    UP000053825    UP000007755    UP000005205    UP000095301    UP000075809    UP000092443    UP000078492    UP000078200    UP000078540    UP000092444    UP000092445    UP000078541    UP000008820    UP000092460    UP000008711    UP000192221    UP000078542    UP000000803    UP000002282    UP000091820    UP000007801    UP000000304    UP000007798    UP000001070    UP000092462    UP000001292    UP000095300    UP000053097    UP000092461    UP000008792    UP000183832    UP000009192    UP000268350    UP000092553    UP000001819    UP000008744    UP000075886    UP000075920   

PRIDE

H9JJZ9    Q8MT61    A1ZAX6    A1ZAX8   

Pfam

PF00439   Bromodomain        + More
PF00628   PHD
PF15612   WHIM1
PF02791   DDT
PF15613   WSD
PF00398   RrnaAD

Interpro

IPR026091   HPS4        + More
IPR018501   DDT_dom       
IPR019787   Znf_PHD-finger       
IPR018359   Bromodomain_CS       
IPR036427   Bromodomain-like_sf       
IPR019786   Zinc_finger_PHD-type_CS       
IPR001487   Bromodomain       
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR028942   WHIM1_dom       
IPR038028   BPTF       
IPR011011   Znf_FYVE_PHD       
IPR028941   WHIM2_dom       
IPR032675   LRR_dom_sf       
IPR001611   Leu-rich_rpt       
IPR029063   SAM-dependent_MTases       
IPR001737   KsgA/Erm       
IPR020596   rRNA_Ade_Mease_Trfase_CS       
IPR011530   rRNA_adenine_dimethylase       
IPR020598   rRNA_Ade_methylase_Trfase_N       

SUPFAM

SSF47370   SSF47370        + More
SSF57903   SSF57903       
SSF53335   SSF53335       

Gene 3D

1.20.920.10     3.30.40.10     3.80.10.10    

ProteinModelPortal

H9JJZ9   A0A2H1WTM8   A0A2A4ISF5   A0A3S2LI72   A0A194PX75   A0A0N1I4P2   + More
A0A212ER15   A0A2A4ITY8   A0A0L7LL31   A0A1Y1K6Y7   A0A0M8ZUG7   D7EJH5   A0A154PCZ0   A0A139W8C3   A0A0L7QZ17   F4WEM3   A0A158NF21   A0A0C9RFL7   A0A0C9RN59   A0A1I8MGY0   T1PJ06   A0A1I8MGY5   A0A1I8MGX7   A0A151WHU9   A0A1A9YCY9   A0A195E7Z8   A0A1A9VQB1   A0A195AUY4   A0A1B0FHV8   A0A1A9ZAH1   A0A195FL09   Q16R21   A0A1B0C1U0   A0A0Q5VKQ7   A0A1W4V0Q6   A0A195C456   Q8MT61   A1ZAX6   B3NML6   A0A0R1DS70   A0A1Q3G3P5   A0A1A9WC71   A0A1W4VD16   A0A0J9RFA2   A1ZAX8   A0A0P8XPK7   B4P556   B3MIE5   A0A0A1WJ60   B4QBC2   A0A0J9RFH7   A0A0K8UTM1   B4MRZ3   B4J6C4   A0A1B0D979   B4HMY9   A0A0K8WB22   A0A1I8Q8B8   A0A0K8UP90   A0A1I8Q8F1   A0A1I8Q8B4   A0A026WR63   A0A1B0GIU5   A0A0Q9WEH7   A0A1I8Q8B6   A0A0K8UPT4   B4LM62   A0A1J1I337   A0A0Q9XL59   A0A3B0JJ62   B4KNP5   A0A0M4EUA7   A0A0R3NNN9   Q28Z46   B4GIA6   A0A336M0T0   A0A1Y1JZG2   A0A182Q042   A0A182W3D5  

KEGG

101743016    K20194 Hermansky-Pudlak syndrome 4 protein | (RefSeq) uncharacterized LOC101743016

GO

GO:0035064   GO:0016589   GO:0046872   GO:0016021   GO:0070923   GO:0031085   GO:0060967   GO:0035280   GO:0031902   GO:0005765   GO:0000179   GO:0003723  

PANTHER

PTHR14407   PTHR45975  

Length:

842

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02038

Exp number, first 60 AAs:

0.00627

Total prob of N-in:

0.00094

outside

1  -  842

 

 

Pi

27.304835

Theta

25.162762

Tajima's D

0.46902

CLR

0.668315

CSRT

0.506024698765062

Interpretation

Uncertain