Gene

KWMTBOMO04766

Pre Gene Modal

BGIBMGA009887

Annotation

PREDICTED:_leucine-rich_repeat_G_protein-coupled_receptor_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr8(+):14459844-14467650      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.491

CDS

ATGAGTTCATTGAACTACAACCTGATCGAGGAAGTTCCGAAGCATGCCTTCAAAAACGCGCAAATTTCAAAACTGAGCTTCAAAGGGAACACTAAGCTGAAACGCTTGGATGAGCATGCGTTTGCGGGAAATTTACTATTACGACAGCTAGATTTAAGTAACACAGCCATTACCTCGCTACCCACTAAAGGACTTGAGAAACTGCAAATACTCAGAATTGAAAGGACTCCATCATTGAAATACATACCATCGATTTACGAATTTCAGCAACTGGAGAAAGCGTACCTGACCCATCACTTCCACTGCTGCGCGTTCAAGTTCCCGGAGATACACAATCCCGCCAGACACAAATTATACGAGACACAGATGGCGATGATGATGCAGAGATGTGCCAGTATACAAAAGTCGCAGGCTCGGAAGCGAAGGTCCTTGGAGCCGATCCGACCCGTCACGGACGGAGCGCAGACTGTCACTGCATTAGAAGATGATGATGCATCTACAATGACTGCGAGCGAAGAATATGAAAACTTCGAAGAGTACTTCTCGGACTCTGGCAGTTTCGAAGATGACGATCAAGGAGAATTCCACGACATTGTCAATGACACTGTCGTGTCGATATCTGCTGACTGTGGCAATTTCAACACAAGAAACCGGAACGTGGAATGCACTCCAGCATCCGACGCCCTGAACCCGTGCGAGGACGTGATGGGCTGGTCGTGGCTGCGGGCGAGCGTGTGGGTGGTGGTGGCGGCCGCGGTGGTGGGGAACGTGGCCGTGCTCCTCGTGCTCCTCACCAACCACACGGAGCTCACCGTCCCGCGGTTCCTCATGTGCAACCTCGCCTTCTCCGATCTCTGCACGGGACTGTACCTCCTCATGCTGGCCGTCGTCGACTTGAGGTCCTACGGGGAGTTCTTCAACTACGCCTACAACTGGCAGTACGGCGTCGGCTGCAAGATAGCCGGTTTCTTGTCAGTTTTCTCCGGGCAACTCTCGGTCATCACCTTGACGATTGTCACGCTGGAAAGGTGGTTCGCGATCACGTACGCCATTTATTTGGAAAGAAGGATTTCTTTGTCGACAGCAGCGAAAATTATGCTCGGAGGGTGGCTGTTCTCTTCGTTGATGGCGGGGCTGCCGTTACTCGGAGTCTCTGACTATTCATCGACTTCGATTTGTTTGCCGGTCGAGAGTAAAGACATAGGGGACGTGATTTATCAAGGGTCTTTGTTCCTGACCAACGCGTTGGCGTGGGTCACGATTGTCGTGTGCTACGTCCAGATCTACCGATCGTTGGGCGGTGGGGGGGAGAATTATGGGGGGAGGCGAGCCGCCGCGGCTGCTGAGCGGCGGATAGCCAACAAAATGGCTCTGCTCATAGGCACAGATTTGCTTTGCTGGGCGCCCGTCGCCTTCTTCGGGGTCACAGCCCTGGCGGGAGTGCCACTGGTCGACGTCAGTCACGGGAAAGTTTTACTAGTGTTCTTTTACCCGTTGAACGCTTGCGCCAATCCGTTCTTGTACGCGATCCTGACAAAGCAGTACCGGCGGGACTTCATAACGCTGGTAGCGAGGACGGGTCAATGTAACTGGTTGGTCGAGAAGTACAAGCTATCGACGACCCCCCCTCCGACCGCGCACACCAACCCCTCGACGCCGGCACAGCTGATGCCCCTGGTAGACCAGAAGAATCATTCGCAAGTCAGTAAAGAGTTTAGCGATTTTAAAGCGTAA

Protein

MSSLNYNLIEEVPKHAFKNAQISKLSFKGNTKLKRLDEHAFAGNLLLRQLDLSNTAITSLPTKGLEKLQILRIERTPSLKYIPSIYEFQQLEKAYLTHHFHCCAFKFPEIHNPARHKLYETQMAMMMQRCASIQKSQARKRRSLEPIRPVTDGAQTVTALEDDDASTMTASEEYENFEEYFSDSGSFEDDDQGEFHDIVNDTVVSISADCGNFNTRNRNVECTPASDALNPCEDVMGWSWLRASVWVVVAAAVVGNVAVLLVLLTNHTELTVPRFLMCNLAFSDLCTGLYLLMLAVVDLRSYGEFFNYAYNWQYGVGCKIAGFLSVFSGQLSVITLTIVTLERWFAITYAIYLERRISLSTAAKIMLGGWLFSSLMAGLPLLGVSDYSSTSICLPVESKDIGDVIYQGSLFLTNALAWVTIVVCYVQIYRSLGGGGENYGGRRAAAAAERRIANKMALLIGTDLLCWAPVAFFGVTALAGVPLVDVSHGKVLLVFFYPLNACANPFLYAILTKQYRRDFITLVARTGQCNWLVEKYKLSTTPPPTAHTNPSTPAQLMPLVDQKNHSQVSKEFSDFKA

Uniprot

Q86S10   B6VCU5   A0A2H1WJT0   A0A0N1PER8   A0A212F6E5   A0A0L7LJZ7   + More
A0A2A4JJ49   A0A0S1YDB2   A0A194PX70   H9JK36   A0A1J1HGD8   A0A2P8XE68   A0A067QID7   A0A182YF55   A0A182M4B0   A0A084VTJ9   A0A182L7T4   A0A182I861   Q7PSL6   A0A182XFE1   A0A182VX05   A0A182RSK6   Q17CY4   A0A182P438   W8PGR8   A0A182TIN3   A0A2J7QDG0   A0A139WFY6   D6WU57   A0A067QJD2   A0A182NG31   A0A182J075   A0A182FA27   N1NVE8   A0A2U9PFW7   A0A336M4P4   A0A1W4V5Q2   A0A1B6LGF2   E0VUL7   X1WK10   B4QV48   Q9VEG4   B3MTN6   Q94979   B3P0G8   A0A1B6M0P2   B4IBD8   A0A2S2PQ43   A0A2H8TYZ0   B0WKK1   B4PKI1   A0A2S2QQ37   Q8SX01   B4NFK8   U3U984   A0A336M7W2   B4JUG0   A0A1B6E925   A0A3B0K2J6   B5DV37   B5DW24   B4KDQ2   B4GMH9   A0A1A9WBU3   A0A1B0B1Q2   A0A0Q9WBH2   B4M5G8   A0A1W4W6I0   A0A2U9PG29   T1HT73   A0A1A9XYP8   A0A0R3NK35   A0A1B6FIP4   A0A1B6H2E8   A0A1B6LJ02   A0A1B6MF70   A0A1B6KV52   A0A2R7WBA7   D6WSS0   A0A0M4EIV1   A0A1B0A9S3   A0A182K8C9   A0A0K8UNB6   W5JNP0   A0A0K8VSY6   U3UA09   A0A0P6IQ05   E9HAA1   A0A0K8UBQ4   A0A034WB40   V3ZKN4   W8C5K0   A0A139WFA3   J9JW42   K1QUZ3   A0A2T7NZD4   A0A0P5NUL5   A0A2P8YYD8   A0A210PHD1  

Pubmed

26354079    22118469    26227816    19121390    29403074    24845553    + More
25244985    24438588    20966253    12364791    14747013    17210077    17510324    24466069    30735632    18362917    19820115    18054377    18025266    18316733    20068045    21843505    23604020    20566863    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    8995395    17550304    23932938    15632085    20920257    23761445    21292972    25348373    23254933    24495485    22992520    28812685   

EMBL

AF177772    AAO32632.1    FJ374692    ACJ06652.1    ODYU01009094    SOQ53267.1    + More
KQ461192    KPJ07033.1    AGBW02010040    OWR49311.1    JTDY01000855    KOB75664.1    NWSH01001389    PCG71443.1    KT031048    ALM88346.1    KQ459595    KPI95740.1    BABH01026621    CVRI01000002    CRK86947.1    PYGN01002550    PSN30300.1    KK853560    KDR06730.1    AXCM01005948    AXCM01005949    ATLV01016358    KE525079    KFB41293.1    APCN01002644    AAAB01008817    EAA05376.3    CH477302    EAT44221.2    KF711859    MH810191    AHL28506.1    QBC65456.1    NEVH01015824    PNF26617.1    KQ971352    KYB26717.1    EFA07460.2    KK853291    KDR08863.1    BK006111    DAA64492.1    MG550226    AWT50660.1    UFQS01000524    UFQT01000524    SSX04597.1    SSX24960.1    GEBQ01017184    JAT22793.1    DS235787    EEB17073.1    ABLF02040478    ABLF02040497    ABLF02040505    ABLF02040514    ABLF02050364    ABLF02058296    CM000364    EDX12531.1    AE014297    BT128700    AAF55460.2    AAN13752.1    AEF33881.1    CH902623    EDV30167.2    U47005    AH003653    AAB07030.1    AAB07999.1    CH954181    EDV48683.1    GEBQ01010468    JAT29509.1    CH480827    EDW44696.1    GGMR01018799    MBY31418.1    GFXV01007662    MBW19467.1    DS231973    EDS29895.1    CM000160    EDW95820.1    KRK02742.1    GGMS01010693    MBY79896.1    AY094926    AAM11279.1    CH964251    EDW83075.2    AB817332    BAO01099.1    SSX04596.1    SSX24959.1    CH916374    EDV91130.1    GEDC01002903    JAS34395.1    OUUW01000014    SPP88454.1    CH675291    EDY71770.2    CM000070    EDY68492.2    CH933806    EDW13886.1    CH479185    EDW38053.1    JXJN01007259    JXJN01007260    JXJN01007261    CH940652    KRF79137.1    EDW59879.2    MG550225    AWT50659.1    ACPB03006071    KRT01116.1    GECZ01019712    JAS50057.1    GECZ01000916    JAS68853.1    GEBQ01016403    JAT23574.1    GEBQ01005404    JAT34573.1    GEBQ01024664    JAT15313.1    KK854555    PTY16819.1    BK006108    DAA64489.1    CP012526    ALC46684.1    GDHF01024316    JAI27998.1    ADMH02000985    ETN64510.1    GDHF01010356    JAI41958.1    AB817331    BAO01098.1    GDIQ01001775    JAN92962.1    GL732611    EFX71271.1    GDHF01028308    JAI24006.1    GAKP01006186    JAC52766.1    KB203827    ESO82975.1    GAMC01004829    JAC01727.1    KYB26612.1    ABLF02030597    ABLF02030601    ABLF02030605    JH816438    EKC35054.1    PZQS01000008    PVD26535.1    GDIQ01137509    JAL14217.1    PYGN01000287    PSN49269.1    NEDP02076698    OWF35904.1   

Proteomes

UP000053240    UP000007151    UP000037510    UP000218220    UP000053268    UP000005204    + More
UP000183832    UP000245037    UP000027135    UP000076408    UP000075883    UP000030765    UP000075882    UP000075840    UP000007062    UP000076407    UP000075920    UP000075900    UP000008820    UP000075885    UP000075902    UP000235965    UP000007266    UP000075884    UP000075880    UP000069272    UP000192221    UP000009046    UP000007819    UP000000304    UP000000803    UP000007801    UP000008711    UP000001292    UP000002320    UP000002282    UP000007798    UP000001070    UP000268350    UP000001819    UP000009192    UP000008744    UP000091820    UP000092460    UP000008792    UP000192223    UP000015103    UP000092443    UP000092553    UP000092445    UP000075881    UP000000673    UP000000305    UP000030746    UP000005408    UP000245119    UP000242188   

PRIDE

Q86S10    H9JK36    Q94979    Q8SX01   

Pfam

PF13855   LRR_8        + More
PF00001   7tm_1
PF13306   LRR_5
PF01363   FYVE

Interpro

IPR001611   Leu-rich_rpt        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR002131   Gphrmn_rcpt_fam       
IPR032675   LRR_dom_sf       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR026906   LRR_5       
IPR000306   Znf_FYVE       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR017455   Znf_FYVE-rel       

SUPFAM

SSF57903   SSF57903       

Gene 3D

3.80.10.10     3.30.40.10    

ProteinModelPortal

Q86S10   B6VCU5   A0A2H1WJT0   A0A0N1PER8   A0A212F6E5   A0A0L7LJZ7   + More
A0A2A4JJ49   A0A0S1YDB2   A0A194PX70   H9JK36   A0A1J1HGD8   A0A2P8XE68   A0A067QID7   A0A182YF55   A0A182M4B0   A0A084VTJ9   A0A182L7T4   A0A182I861   Q7PSL6   A0A182XFE1   A0A182VX05   A0A182RSK6   Q17CY4   A0A182P438   W8PGR8   A0A182TIN3   A0A2J7QDG0   A0A139WFY6   D6WU57   A0A067QJD2   A0A182NG31   A0A182J075   A0A182FA27   N1NVE8   A0A2U9PFW7   A0A336M4P4   A0A1W4V5Q2   A0A1B6LGF2   E0VUL7   X1WK10   B4QV48   Q9VEG4   B3MTN6   Q94979   B3P0G8   A0A1B6M0P2   B4IBD8   A0A2S2PQ43   A0A2H8TYZ0   B0WKK1   B4PKI1   A0A2S2QQ37   Q8SX01   B4NFK8   U3U984   A0A336M7W2   B4JUG0   A0A1B6E925   A0A3B0K2J6   B5DV37   B5DW24   B4KDQ2   B4GMH9   A0A1A9WBU3   A0A1B0B1Q2   A0A0Q9WBH2   B4M5G8   A0A1W4W6I0   A0A2U9PG29   T1HT73   A0A1A9XYP8   A0A0R3NK35   A0A1B6FIP4   A0A1B6H2E8   A0A1B6LJ02   A0A1B6MF70   A0A1B6KV52   A0A2R7WBA7   D6WSS0   A0A0M4EIV1   A0A1B0A9S3   A0A182K8C9   A0A0K8UNB6   W5JNP0   A0A0K8VSY6   U3UA09   A0A0P6IQ05   E9HAA1   A0A0K8UBQ4   A0A034WB40   V3ZKN4   W8C5K0   A0A139WFA3   J9JW42   K1QUZ3   A0A2T7NZD4   A0A0P5NUL5   A0A2P8YYD8   A0A210PHD1  

PDB

4AY9     E-value=9.22521e-18,     Score=223

KEGG

692585    K04249 thyrotropin receptor | (RefSeq) Lgr; leucine-rich repeat G protein-coupled receptor

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0016500   GO:0016021   GO:0004930   GO:0007189   GO:0005887   GO:0009755   GO:0008528   GO:0007190   GO:0042562   GO:0008188   GO:0019933   GO:0007186   GO:0007218   GO:0004963   GO:0046872   GO:0005515   GO:0016020   GO:0035023   GO:0016742   GO:0003824  

Length:

577

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

153.49735

Exp number, first 60 AAs:

0.00035

Total prob of N-in:

0.01329

outside

1  -  243

TMhelix

244  -  263

inside

264  -  274

TMhelix

275  -  297

outside

298  -  330

TMhelix

331  -  353

inside

354  -  364

TMhelix

365  -  384

outside

385  -  403

TMhelix

404  -  426

inside

427  -  456

TMhelix

457  -  479

outside

480  -  488

TMhelix

489  -  511

inside

512  -  577

 

 

Pi

21.440348

Theta

21.708528

Tajima's D

-0.310383

CLR

1.517553

CSRT

0.287135643217839

Interpretation

Uncertain