SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04755
Pre Gene Modal
BGIBMGA009858
Annotation
PREDICTED:_uncharacterized_protein_LOC101742722_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.298
 

Sequence

CDS
ATGAACGATATAAGTTTGAAAACAGTACCTCCGAAGGATCAAGCCGGTGTCGTGGAAACGCCGCCAACTGTGACCAGCGGAGAAAACGATGTGGATCCCTTAGTAATTAACGAAGTTTTGACGAATACAGAATCATTGAAAGAACAGGAAGGAGTCGAAGCGCCTCATTCTGAAGAAAAGGCGGGAATCTGTGATGAAAATGCCAAAGAAAAGATTGTAAACCCATTGGAGATTGAAGAGTGTGATAAAGCAGTTGTATTGCAGAATGAGGAACCTGATGAACAAATAAACGAAGAAACAAGTTTGTCATCTTTACCAGTAGAAGATCCTGTAGAGACTATAACAAAAAACCCTGAGCCAATAGCTGAGGATGTTTCTACAGTCAAGCCTGCAGTGACTGAAGAGCAAGAGAAAACTGTTGTCGTTGAACCAGAGCCTGTAGCACCTGCTGTTACTGTTCCGGTTGAAATAAAAGAGGAACCGATTATTGAGGAGCCGAAGTCTCAAGAACCGGAGCCTGATGTAGATATGACAGAGACTGCACCGATAGAGGAGAAAACTGAACACAAATTTGATTACAAGCCAAAAATTCAACCCCTCAACGGTGATATTAAGGAAGAGCAAGGCGTTAAACGTCGTTCAAGCGAAGAAGCCGAAAGCGAGTCCCCCCCTAAGAAGCTCTGTCAAGAAGTAGAGAAGACCTTCCCGCAACATGACACTATGATTAACGACTACATACAGACTGCGACAAAGAACAGCGTCGACGAAATACAGAGGCACACGGAGCAACTTCTCTCGGAGATACAGACGCTACGAGAACTAGCACAGAAGAAGGAACACGAGTGGAATAACATCTTACACCTGAAGAAGGTCAAGGAAGAGATCCTCCTGAGGCTGCTGAGGCGAAAACAGGTATTGTCCTTCGAGAAAGCGCCCGAGGTGAACGGCTCAGACAGGCCGGACCCCTTCGACTACCTGAACCATCCCAAGAACTTGGCGATTGACAAAAGCGACGAAATATCCGGCCTAGCCATAAAACCGCCCGGAGGAGTTAATCCTATGATGCAGGGCCCCGTGATGCCGGTGACGTCACACTTCAACCCCCTCACCGGCCTGCCCCCGCCGTACGACAAGGCCCACCTGCAATCGATGCCGAAGCCAGTATTCCCGCAGATGATGATGCCCGGGCCGTTACCGGGCTTCCCGAGGGACATGAACGGACAACTGCCCGGCTTCGGGCTGCCCATGGGCCGCCAGGGTCCCACCAAGGACGTGAAGTCGATAATCGCGGACTACCGGCAGCGGAACCCGGAGATCACGCCGCGGAGAGGACGCCGGATGAAGTCCATCCTGAACCCCAACATGATGAACGCGCCGAGACCCATCGCGCCGAAGATCGACAACATGAGCAACTTGAACAACCTGAATATGCTGTTTAACAACTTGGATATGGTGAGTTGCATTCAACATTCAACATTATTGCAAATTGTTATCTATATTAAAAGTAAAATAATATAA
Protein
MNDISLKTVPPKDQAGVVETPPTVTSGENDVDPLVINEVLTNTESLKEQEGVEAPHSEEKAGICDENAKEKIVNPLEIEECDKAVVLQNEEPDEQINEETSLSSLPVEDPVETITKNPEPIAEDVSTVKPAVTEEQEKTVVVEPEPVAPAVTVPVEIKEEPIIEEPKSQEPEPDVDMTETAPIEEKTEHKFDYKPKIQPLNGDIKEEQGVKRRSSEEAESESPPKKLCQEVEKTFPQHDTMINDYIQTATKNSVDEIQRHTEQLLSEIQTLRELAQKKEHEWNNILHLKKVKEEILLRLLRRKQVLSFEKAPEVNGSDRPDPFDYLNHPKNLAIDKSDEISGLAIKPPGGVNPMMQGPVMPVTSHFNPLTGLPPPYDKAHLQSMPKPVFPQMMMPGPLPGFPRDMNGQLPGFGLPMGRQGPTKDVKSIIADYRQRNPEITPRRGRRMKSILNPNMMNAPRPIAPKIDNMSNLNNLNMLFNNLDMVSCIQHSTLLQIVIYIKSKII

Summary

Pfam
PF01753   zf-MYND
Interpro
IPR002893   Znf_MYND        + More
IPR024119   TF_DEAF-1       

Ontologies

Topology

Length:
505
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.08679
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00247
outside
1  -  505
 
 

Population Genetic Test Statistics

Pi
21.66218
Theta
20.305885
Tajima's D
0.477155
CLR
0.211571
CSRT
0.51602419879006
Interpretation
Uncertain
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