Silkworm Genome Informatics Database

Gene

KWMTBOMO04728

Pre Gene Modal

BGIBMGA009868

Annotation

PREDICTED:_troponin_C-like_[Amyelois_transitella]

Location

Bomo_Chr8(-):13495646-13496870 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.919

CDS

ATGGCGAGAAACCGTACCGGTAGTTTGAATGACCCCGATTATGACGCACTGGTGACTGGTGGTAGGACCTCTTTGCTGAGACGCGCTTTCAGCATGTTCGACTCTCAGAAGCAAGGGAAGATCGAGAAAGACAAAATCAGGACCATCCTCAATACTATGGTGCACAATTACGATGACCTAGAGCTCGATAGGATGCTGGACAGCGAAGATGCAGATGGTGAGTCTGACAGGAGACTTAGTGACGTAGCTTAA

Protein

MARNRTGSLNDPDYDALVTGGRTSLLRRAFSMFDSQKQGKIEKDKIRTILNTMVHNYDDLELDRMLDSEDADGESDRRLSDVA

Uniprot

A0A0M9ACI7 A0A0L7LMH8

Pubmed

26227816

EMBL

KQ435700 KOX80483.1 JTDY01000570 KOB76642.1

Proteomes

UP000053105 UP000037510

Pfam

PF13499 EF-hand_7

Interpro

IPR011992 EF-hand-dom_pair + More
IPR002048 EF_hand_dom

SUPFAM

SSF47473 SSF47473

CDD

cd00051 EFh

ProteinModelPortal

A0A0M9ACI7 A0A0L7LMH8

PDB

5UKG E-value=0.0172721, Score=82

KEGG

101746889 no KO assigned | (RefSeq) troponin C-like

GO

GO:0005509 GO:0016887 GO:0006355 GO:0006412 GO:0006511 GO:0016020 GO:0035023 GO:0005515 GO:0016742 GO:0003824

Length:

83

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00016

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.55181

inside

1 - 83

Pi

158.011648

Theta

117.798524

Tajima's D

1.023897

CLR

0

CSRT

0.665316734163292

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics