SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04725  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009946
Annotation
PREDICTED:_von_Willebrand_factor_A_domain-containing_protein_8_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.487 Mitochondrial   Reliability : 1.318 Nuclear   Reliability : 1.384
 

Sequence

CDS
ATGTATATCCCTGAGGTAACGGTTAGAAGAATTGATGTCTTGATGCGTATTTTAAGTCATCGTAAAGTGATTTTAACTGCGAATCCCGTCAGAGCGTATTCTAGTGACGATAAAGTGACTATAGGAGATGTGACCAAAGAGATTTCGCGTCCGAAAAAGGTCGAATACGTCCCCAGGAAGTATCTAACTATAGAAAATACGGAAATTAAATCATTATCACAAAGTACCTTGAGAAATTTAAGATGGATGATGCAAAAAGATTCTCTTGGACAAGATATGTTTCTCTTAGGAAGACCTGGACCGAGCAGGAGAAAAGTAGCATTACAATATTTAGAGTTGACTCAAAGAGAATTAGAATATGTGGCGCTATCAAGGGATACCACAGAGGCAGATCTCAAACAGAGAAGGGAGATACATAGTTCCACTGCCCAATATTTTGATCAGAGCGCAGTTAGAGCAGCGGTCGAAGGACGTGTACTCGTGTTGGAAGGCATTGAGAAGGCCGAAAGGAATGTCCTGCCAGTATTGAATAATCTTCTGGAAAACAGAGAGATGCATTTAGAAGACGGCAGATTTCTGGTACCTCCGACGAGATACGATAAACTTTTACAGGAGCATGGCCCTGAAGAAGTTGCTAGATGGCGCTTAGTACGCGTCGATGAGAACTTCAGAGTGATAGCCCTAGGACTCCCGGTGCCGCGGTACAGCGGGCAGCCCTTAGATCCTCCCTTACGTTCTAGATTCCAAGCCAGGGATGTTGCCACTATTGGATACGGGGAGCATTTAGCAGTGTTGAAAGAAGATGCCCCTAATGCTGACCAGACGAAACTGGAGCAGCTCATGTCAGCCGCGTACGCTCTCGTCAGTCCTGAGTTGCTGCAGATCAGCTTACCAGATTTTCCTGTGGATAGTCTTCATGTGGCGGCACTCATACTGGAAAGAAATCCGAAAATTCCTATACATAAACTCTTATATTTCCTTTACCCGTACAATACATTCCTGACGAGAGATCACGTGAAAAACGTCGAAGGGGTTCTTCAGAACTTGCAGATGGACACGAAGCCGATCTGCAAGACGACACTGGAGGGTGTCGAGTTCAAAGGATCTGAAGCTTTAGTGAATATGGATATGGACGGAGCTAAGGCGGAGTTTTGTGTGCCCCGGGGAAGACGGCAAACGGGACGGGAAAGGAAGGGGGTTGTTAAAACTGCATATCAAAGTCGGCTGCTGAATGAGCTGTTGATGACTCACAGCGTCGCTGACTTTTGCGTCATAGGTCCCAAAGGTTGCGGGAAAAGTCTTCTGGTATCCCAGTTAGCTTCATTACTGGGCTACACGATAGAACCGATAGTTCTGTACCAGGACATGACGGCCAGGGATCTGATTCAGCAGCGGACGACCCTGGACAGCGGCGACACGGTGTGGAGGAACTCGGCTTTAGTCGAAGCCGCCTTGAAAGGACATCTAGCGGTGCTCGACGGGTTGCACAGGATGCACGCCAGTACCTTGGCCGTGCTTCATAGACTGGTCCACGACCGCGAGCTGCAACTGCACGACGGGACCAGGCTGCTGCGTCACGACAGGTACGACGAGCTGGTCGCCGCGGGGCACACGGAGGAGCAGCTCGATAAAAACGGAGTCAAGAGGATCCACCCATCGTTTAGGATTGTTGCGTTAGCGGAACCACCGACTGTCGGTCGCGGTCAACACTGGCTGTCTCCGGAAATACTCAGCTTGTTCGTGTTCCACGAGATGAGGAACCTCAGTAAGGACGAGGAGATATTCATCATCAATACACTGTATGGCGACATATCACCGCCGCTGCAGACGATAATCGAATTAGCGGATGAACTTCGCAATTCCGACGATAACACTTTAAAGAGTTTATCTTCTTCGCTGTCCACTCGACAGCTGCTGAGGATAGCCAGTAGGATGTCTAAATATCCCACGGATTCGGCCTACGAGACGGTCCAGCGAACGTTCTTAGCCAAATTCCTGCCTAACTTAGCCAGGCGTGCTTTGGACAGCGTCAGCCAAAAGCTAGGCATCGAGCCGCCGAGAAAACTGGGCATTTTTGGTAGCAATCCCAACGAGACAACCGTGGCGTGTACAGTCAAGAACAACGTTCTTACCATCGGCAAAACCAGCACTGAGATATTCAAAACGGACGCTTTGACCAAAGTACCGGACATACTGTTCTACGACGTACCTCAACATATGCGCTTGTTGGAGTGGCTGCTACAGGACTTCCTGCTCGGCAACCATTTACTGCTAGTCGGCAATCAGGGAGTAGGAAAGAACAAGATCGCCGACAGACTCCTGCAGCTAATGAATCGGCCGCGCGAGTACATCCAGCTACACAGAGACACGACCGTGCAGTCCTTGACCGTACAGCCGACTGTGAGAGATGGTGTCGTTATATATGAAGATTCTCCATTAGTGAAAGCAGTTAAATTTGGTCACGTATTAGTGGTGGACGAAGCTGACAAGGCTCCTACTCATGTGACGTGTATTCTGAAGACCCTGGTTGAGAACGGAGAGATGGTCCTGAGTGATGGTCGAAGAATTGTCCCTAAGGATATGATGGAGAGCTCAGGTGGCGAATTGTCCAGCTTCATTCCCGTACACGATGACTTCAGGATGATCGTGTTGGCGAATCGACCTGGTTTCCCGTTTCTGGGCAACGATTTCTTCGCTTCTCTAGGTGATCTGTTCTCGTGTCACGCCGTCGACAATCCCTCGATCGATTCGGAGATGGAGCTTCTCCGCTCGTACGGACCAGACGTGCCTCGGGATGTCATGAAGAAGCTGGTGCAGGCCTTCGCTGTGCTGAGGGAGAAGGCTGATCAGGGACAGTTGACGTATCCTTATTCGACGAGGGAGCTGGTCAATATTGTCAAGCATTTGCAGAAATATCCAGACGAAGATCTGGCCACAGCGATTGGCAACGTGTTCGACTTCGACAGGTACAGCAAGGACGTGTCGGACACGTTGCTGGAAGTGCTCCACTCTAGCGGGCTGCCGACAGATGGCGTGCTCGAAGGTCGCTCGAAGGACCTCAAGAAGCTTCAGATGACCATAGAGAGGACCAGCGGCAAAGACGTGTCGTCGCCGAAGCACGGCAAAGAAGACCCGGACAACAAGCCGCACGTGGGCGGGAACACGTGGGCGGGCGGCACCGGGGGGCGCGACACCGCGGGGCTCGGGGGGAAGGGGGGACCCTACCGCCTGGACAAGGGACACGACGTGCACCAGTTGTCAGACGCCGAGAAGGCCGACGTGCCGGAGCACGTGCGGCGCGCCGCCCGCGAGATGAACAGGAAGGCGTTCGAAGAGAGGCTGAAGGAGATCAAGATGAGCGAGTACGACGCCAAGCTGTACGAGCAGTTCCACAGGGCCGTGCAGCCCCAGATAGGCGCGCTGCGTGGGGTCCTAGCAGAGCTACAAGCCAAGGCTAAAGAGAGGCAATGGAGCCGACACCAGACCAGCGGTGAACTCGACGACGGGAAAATAATTGAAGGTTTGACCGGAGAGAAGACGATATATCGACGCCGCACGGAGCAGCCGCCGCCAGAGGGCGCTCCGCCGGACAAACCGAAACGGCTCAGGCTAGTTCTAGACGTTTCCGGCAGTATGTACAGGTTTAATTCGTACGACGGTCGTCTGGAACGTTCCATGGAAGCCGTGGTGCTCCTCACCGAGGCGCTGCGGGGCTACGAGTCCAGGATCAAGTACGACATGTACGCGCACTCCGGGGAGGAGCACGCCCTCGAGCTGGTCAGGGCGGACCGGCCGCCGGAAAACGAAAAGCAGAGATTAGAGATAATAAGAACAATGCACGCGCACGCGCAGTTCTGTTGGTCCGGGGACAACACTCTGCCGGCGGCCCGGCACGCCATCTCCACGCTCGCCGAGGAAGACGCGGACGAGGCCATCGTTCTGATACTCTCCGACGCGAACCTGAGGAGGTACGGCATTCCCCCGGAGCGTTTGGGTGCCATTCTGACCGCGGAGCCCAAAGTTCAAGCGCACGTCATATTCATCGGCAGCTTGGGAGATGAAGCCAATTCACTGCTGAGGAGGCTGCCGGTGGGTCACGCGCACGTTTGCATGGACGTAGCGTCGTTGCCGCACATCATGCAGCAGATATTTGCGTCCTCGCTGCTGCAGACCTCATGA
Protein
MYIPEVTVRRIDVLMRILSHRKVILTANPVRAYSSDDKVTIGDVTKEISRPKKVEYVPRKYLTIENTEIKSLSQSTLRNLRWMMQKDSLGQDMFLLGRPGPSRRKVALQYLELTQRELEYVALSRDTTEADLKQRREIHSSTAQYFDQSAVRAAVEGRVLVLEGIEKAERNVLPVLNNLLENREMHLEDGRFLVPPTRYDKLLQEHGPEEVARWRLVRVDENFRVIALGLPVPRYSGQPLDPPLRSRFQARDVATIGYGEHLAVLKEDAPNADQTKLEQLMSAAYALVSPELLQISLPDFPVDSLHVAALILERNPKIPIHKLLYFLYPYNTFLTRDHVKNVEGVLQNLQMDTKPICKTTLEGVEFKGSEALVNMDMDGAKAEFCVPRGRRQTGRERKGVVKTAYQSRLLNELLMTHSVADFCVIGPKGCGKSLLVSQLASLLGYTIEPIVLYQDMTARDLIQQRTTLDSGDTVWRNSALVEAALKGHLAVLDGLHRMHASTLAVLHRLVHDRELQLHDGTRLLRHDRYDELVAAGHTEEQLDKNGVKRIHPSFRIVALAEPPTVGRGQHWLSPEILSLFVFHEMRNLSKDEEIFIINTLYGDISPPLQTIIELADELRNSDDNTLKSLSSSLSTRQLLRIASRMSKYPTDSAYETVQRTFLAKFLPNLARRALDSVSQKLGIEPPRKLGIFGSNPNETTVACTVKNNVLTIGKTSTEIFKTDALTKVPDILFYDVPQHMRLLEWLLQDFLLGNHLLLVGNQGVGKNKIADRLLQLMNRPREYIQLHRDTTVQSLTVQPTVRDGVVIYEDSPLVKAVKFGHVLVVDEADKAPTHVTCILKTLVENGEMVLSDGRRIVPKDMMESSGGELSSFIPVHDDFRMIVLANRPGFPFLGNDFFASLGDLFSCHAVDNPSIDSEMELLRSYGPDVPRDVMKKLVQAFAVLREKADQGQLTYPYSTRELVNIVKHLQKYPDEDLATAIGNVFDFDRYSKDVSDTLLEVLHSSGLPTDGVLEGRSKDLKKLQMTIERTSGKDVSSPKHGKEDPDNKPHVGGNTWAGGTGGRDTAGLGGKGGPYRLDKGHDVHQLSDAEKADVPEHVRRAAREMNRKAFEERLKEIKMSEYDAKLYEQFHRAVQPQIGALRGVLAELQAKAKERQWSRHQTSGELDDGKIIEGLTGEKTIYRRRTEQPPPEGAPPDKPKRLRLVLDVSGSMYRFNSYDGRLERSMEAVVLLTEALRGYESRIKYDMYAHSGEEHALELVRADRPPENEKQRLEIIRTMHAHAQFCWSGDNTLPAARHAISTLAEEDADEAIVLILSDANLRRYGIPPERLGAILTAEPKVQAHVIFIGSLGDEANSLLRRLPVGHAHVCMDVASLPHIMQQIFASSLLQTS

Summary

EMBL
NWSH01002242    PCG68848.1    AGBW02013650    OWR43040.1    BABH01039556    BABH01039557    + More
BABH01039558    RSAL01000127    RVE46538.1    KQ459595    KPI95707.1    ODYU01003733    SOQ42887.1    GFDF01009711    JAV04373.1    GFTR01008764    JAW07662.1    GBBI01002820    JAC15892.1    GBHO01007485    JAG36119.1    GANO01004254    JAB55617.1    GEZM01034596    GEZM01034595    JAV83706.1    CH477748    EAT36645.1    GFDL01011045    JAV24000.1    DS231864    EDS40232.1    UFQT01000116    SSX20309.1    UFQT01001084    SSX28819.1    JXUM01131222    JXUM01131223    KQ567682    KXJ69322.1    AXCN02001240    ATLV01017829    KE525195    KFB42502.1    AXCM01007249    JRES01000984    KNC26477.1    KA645076    AFP59705.1    CCAG010005465    JXJN01014565    APCN01001132    AAAB01008846    EAA06275.4    GGFK01001104    MBW34425.1    GGMS01005392    MBY74595.1    GGFK01001098    MBW34419.1    GBXI01014291    JAD00001.1    ADMH02001819    ETN61020.1    GDHF01032130    JAI20184.1    GDHF01031753    JAI20561.1    GGFM01007080    MBW27831.1    GGFJ01000466    MBW49607.1    ABLF02036528    GL732628    EFX69902.1    GEDC01031529    JAS05769.1    CH479194    EDW26961.1    AE014298    AAN09251.1    CVRI01000061    CRL04033.1    CH954180    EDV46258.1    CH379063    EAL32725.1    CM000162    EDX02843.2    AGB95224.1    CH480883    EDW54766.1    OUUW01000011    SPP86841.1    CH916370    EDW00287.1    CH964239    EDW81979.1    CH933813    EDW10970.1    CP012528    ALC48679.1    CH940677    KRF78220.1    KRF78221.1    LNIX01000073    OXA36791.1    GBGD01000220    JAC88669.1    GG694899    EFA13666.1    GFDF01010417    JAV03667.1    AJVK01003096    AJVK01003097    AJVK01003098    APGK01043774    KB741017    ENN75272.1    KRG07380.1    GECU01013118    JAS94588.1    KQ414606    KOC69518.1    KQ979074    KYN22993.1    KB631644    ERL84955.1    GL437072    EFN71148.1    ADTU01003242    KQ976692    KYM77750.1    QOIP01000001    RLU26772.1    GAKP01020193    JAC38759.1    GL888250    EGI63847.1    KQ982851    KYQ49885.1    DS235478    EEB16045.1    SPP86842.1   
Pfam
PF07728   AAA_5        + More
PF00092   VWA
Interpro
IPR036465   vWFA_dom_sf        + More
IPR027417   P-loop_NTPase       
IPR002035   VWF_A       
IPR011704   ATPase_dyneun-rel_AAA       
IPR039891   VWA8       
IPR003593   AAA+_ATPase       
IPR000048   IQ_motif_EF-hand-BS       
SUPFAM
SSF52540   SSF52540        + More
SSF53300   SSF53300       
Gene 3D
PDB
5C3C     E-value=2.89446e-09,     Score=153

Ontologies

Topology

Length:
1392
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00524
Exp number, first 60 AAs:
0.00043
Total prob of N-in:
0.00015
outside
1  -  1392
 
 

Population Genetic Test Statistics

Pi
258.026858
Theta
167.107403
Tajima's D
1.524484
CLR
0.390128
CSRT
0.790210489475526
Interpretation
Uncertain
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