Gene

KWMTBOMO04722  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009929

Annotation

PREDICTED:_atrophin-1-like_[Bombyx_mori]

Location

Bomo_Chr8(-):13198339-13205569      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.354

CDS

ATGACGGCTTGGGGTACAACGGGCCAAAGGAAACGCATGAAAATACCCAGTGTCAAGTTGACGAAAAAATTTACTACCAAAGACAACAGACCTTTAATATACGAAACTGAGGATTTTTTCAAAAAACTCGAGAATCAACTTAAAGCTTTGAACTTAGGCAAGCCTCCGAAGACCAAGAAAAATGACATTCCATCGTCACAGCGTTCGAAGAATGACAGAGAAGTAAACGCTGGCAGTGAAACTCTTCGCGACGATGTAGATGATGAAGGTGGTGGAGAACAAAAAAGACGCGGCAAACGTCGTCGCAAAGGACGTCCAGGAGGCAGCGACCGCCTGACTTCGGCGGGATTGGCAGCTCAAACACAGCAAGACCCTGAAACACAAATCGCCGGAATAGGAACTGACTCACAGAACCCTAGTTCCCGAGGCTCCGTTGCTTCGACAGCCGATGATGATATCATTGTACCGCCGGTTGTCAAGACCAGTATAGCGAAGAAGACCGACTCATTTCTCGATGACGATATATTGAAATACCTGCACAGAGAAGTCGATGAAGAAGCAATCGAAATTGAATTTGATGTAAAGAGACGTTACGTCCTTGAAGAAGCTCTGCGTACGCGTCCCGATCGGCCTCAAGGTCAAGAGATGCAGGCTTTACTTCGGGAACTGAAGGTACCAGCTGTAAGTCTCGGGGACTGGCTACACATACCAAGAGTGTTCTCGAGACAGAACGCACAGTTTTCATTGCCGATAGATTCGAATGAACTTGAGGTTTTAACTCCAATGAACTACGCAGCGAGATTCGTATCTTTGAAAAAGTCAAAGCAATTATTGTACCTGACCGTGTTGAGGAAATTTCGTCCGAACGGCTATAGGATGCCTATAAAGGATATAGAAGATGGTCTTATCTTAATGATGGGTGGTATTATGACACTAAGTCAAGTCAACCACTTCAAAGAAATCATGAGCTGGACGTATTATGAGGAAGAAGAGAGTATACCGGACGAAATTAAGTTGACCTTACTGAACACCGGATACAGGAAGAACTCTGTTTCTGAGGGAGGAGATTCAGAAGAGCCTGAAGGACACACAGTTAAATTTAGAACTTGGTGTGGTCTGTGCGCGATTTGTGAACGCATGTACGGACGATTTCCGCTTCGAGAGAAAGATCCCCCAGACGGGATTGAATTAAGTGATTTTAGCATGATAGAAGTTAAACTAGCTACACTTAAAGTAAACAGTGGGTTGAGAGAAATTTTAAATACAATAAAAGAACGATAA

Protein

MTAWGTTGQRKRMKIPSVKLTKKFTTKDNRPLIYETEDFFKKLENQLKALNLGKPPKTKKNDIPSSQRSKNDREVNAGSETLRDDVDDEGGGEQKRRGKRRRKGRPGGSDRLTSAGLAAQTQQDPETQIAGIGTDSQNPSSRGSVASTADDDIIVPPVVKTSIAKKTDSFLDDDILKYLHREVDEEAIEIEFDVKRRYVLEEALRTRPDRPQGQEMQALLRELKVPAVSLGDWLHIPRVFSRQNAQFSLPIDSNELEVLTPMNYAARFVSLKKSKQLLYLTVLRKFRPNGYRMPIKDIEDGLILMMGGIMTLSQVNHFKEIMSWTYYEEEESIPDEIKLTLLNTGYRKNSVSEGGDSEEPEGHTVKFRTWCGLCAICERMYGRFPLREKDPPDGIELSDFSMIEVKLATLKVNSGLREILNTIKER

Uniprot

H9JK78   A0A2H1VPW1   A0A2A4JB63   A0A3S2NRA0   A0A194PQW4   A0A0N1PHK7   + More
D6WXC6   A0A1B6G704   N6SYI2   E0V9K6   A0A2J7PU60   A0A2J7PU52   A0A2P8Z4Q3   A0A0C9RZU0   A0A067RH25   A0A0C9R853   A0A2A3EMF3   F4X6U9   A0A088A4W9   A0A087ZR69   A0A195CI52   A0A151XC43   A0A2S2NQJ6   A0A3Q0JKQ4   A0A195E7P4   E1ZYY2   K7IV40   A0A158NGC8   J9JYT2   A0A0M8ZXJ4   A0A154NZT6   A0A1B0CHW1   A0A182GXZ8   D1MLM5   A0A182HD51   A0A310SCK3   A0A1S4FQA8   A0A2P8Z0N2   A0A182JPR6   A0A084W4F2   Q16T82   A0A182W265   B0X4P1   A0A182M4X5   A0A182N9Q6   A0A182PK99   A0A0L7QJS2   A0A336LZR8   A0A182RMR2   A0A182QF22   A0A182IRK7   A0A1W4VN97   Q7PV52   W5JR65   A0A182FU91   A0A182UYA0   A0A1S4H925   A0A182XFR0   B3NDK3   A0A182HHS8   A0A182KLM5   A0A182TW65   B3MAC5   A0A0M5IZ21   A0A0M4EIU9   A0A182SVD6   A0A0L0CAP5   B4JZZ7   B4MX69   A0A182YBQ9   B4L0I4   Q2M1D8   B4GU95   A0A1I8M4I6   A0A3B0K6H6   Q9VUR8   A0A1I8Q2R4   B4QL46   B4HIH4   B4LII6   B4PCJ4   B4PCH6  

Pubmed

19121390    26354079    18362917    19820115    23537049    20566863    + More
29403074    24845553    21719571    20798317    20075255    21347285    26483478    20920202    24438588    17510324    12364791    20920257    23761445    17994087    20966253    26108605    25244985    15632085    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    17550304   

EMBL

BABH01039550    BABH01039551    BABH01039552    ODYU01003732    SOQ42883.1    NWSH01002166    + More
PCG69006.1    RSAL01000127    RVE46540.1    KQ459595    KPI95702.1    KQ459784    KPJ19937.1    KQ971361    EFA08824.1    GECZ01011559    JAS58210.1    APGK01052113    KB741209    ENN72844.1    DS234994    EEB10062.1    NEVH01021208    PNF19870.1    PNF19867.1    PYGN01000196    PSN51473.1    GBYB01013656    JAG83423.1    KK852473    KDR23116.1    GBYB01009062    JAG78829.1    KZ288219    PBC32221.1    GL888818    EGI57881.1    KQ977754    KYN00107.1    KQ982314    KYQ57925.1    GGMR01006836    MBY19455.1    KQ979568    KYN20867.1    GL435242    EFN73672.1    AAZX01011129    ADTU01014817    ABLF02026693    KQ435833    KOX71623.1    KQ434782    KZC04508.1    AJWK01012770    AJWK01012771    AJWK01012772    JXUM01096545    KQ564272    KXJ72495.1    GU196316    ACZ26276.1    JXUM01033969    JXUM01033970    KQ561007    KXJ80060.1    KQ763450    OAD55044.1    PYGN01000253    PSN50040.1    ATLV01020330    KE525298    KFB45096.1    CH477658    EAT37672.1    DS232349    EDS40458.1    AXCM01001492    KQ415047    KOC58853.1    UFQT01000062    SSX19198.1    AXCN02001803    AAAB01008986    EAA00446.5    ADMH02000726    ETN65239.1    CH954178    EDV52136.2    APCN01002438    CH902618    EDV40176.2    CP012525    ALC44736.1    ALC44740.1    JRES01000760    KNC28524.1    CH916383    EDV98679.1    CH963876    EDW76902.1    CH933809    EDW19153.1    CH379069    EAL30636.2    CH479191    EDW26178.1    OUUW01000027    SPP89735.1    AE014296    AAF49607.2    CM000363    CM002912    EDX10571.1    KMY99791.1    CH480815    EDW41604.1    CH940647    EDW70773.2    CM000159    EDW94904.1    EDW94886.2   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000053240    UP000007266    + More
UP000019118    UP000009046    UP000235965    UP000245037    UP000027135    UP000242457    UP000007755    UP000005203    UP000078542    UP000075809    UP000079169    UP000078492    UP000000311    UP000002358    UP000005205    UP000007819    UP000053105    UP000076502    UP000092461    UP000069940    UP000249989    UP000075881    UP000030765    UP000008820    UP000075920    UP000002320    UP000075883    UP000075884    UP000075885    UP000053825    UP000075900    UP000075886    UP000075880    UP000192221    UP000007062    UP000000673    UP000069272    UP000075903    UP000076407    UP000008711    UP000075840    UP000075882    UP000075902    UP000007801    UP000092553    UP000075901    UP000037069    UP000001070    UP000007798    UP000076408    UP000009192    UP000001819    UP000008744    UP000095301    UP000268350    UP000000803    UP000095300    UP000000304    UP000001292    UP000008792    UP000002282   

PRIDE

H9JK78    Q9VUR8   

Pfam

PF03154   Atrophin-1        + More
PF16134   THOC2_N
PF11262   Tho2
PF11732   Thoc2
PF07817   GLE1
PF02114   Phosducin
PF00069   Pkinase
PF08926   DUF1908

Interpro

IPR002951   Atrophin-like        + More
IPR017884   SANT_dom       
IPR009057   Homeobox-like_sf       
IPR001005   SANT/Myb       
IPR000949   ELM2_dom       
IPR040007   Tho2       
IPR021418   THO_THOC2_C       
IPR032302   THOC2_N       
IPR021726   THO_THOC2_N       
IPR012476   GLE1       
IPR038506   GLE1-like_sf       
IPR001200   Phosducin       
IPR036249   Thioredoxin-like_sf       
IPR023196   Phosducin_N_dom_sf       
IPR024253   Phosducin_thioredoxin-like_dom       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR023142   MAST_pre-PK_dom_sf       
IPR015022   MA_Ser/Thr_Kinase_dom       
IPR000719   Prot_kinase_dom       

SUPFAM

SSF46689   SSF46689        + More
SSF52833   SSF52833       
SSF56112   SSF56112       
SSF140482   SSF140482       

Gene 3D

1.25.40.510     1.10.168.10     1.20.1480.20    

CDD

cd02987  Phd_like_Phd

ProteinModelPortal

H9JK78   A0A2H1VPW1   A0A2A4JB63   A0A3S2NRA0   A0A194PQW4   A0A0N1PHK7   + More
D6WXC6   A0A1B6G704   N6SYI2   E0V9K6   A0A2J7PU60   A0A2J7PU52   A0A2P8Z4Q3   A0A0C9RZU0   A0A067RH25   A0A0C9R853   A0A2A3EMF3   F4X6U9   A0A088A4W9   A0A087ZR69   A0A195CI52   A0A151XC43   A0A2S2NQJ6   A0A3Q0JKQ4   A0A195E7P4   E1ZYY2   K7IV40   A0A158NGC8   J9JYT2   A0A0M8ZXJ4   A0A154NZT6   A0A1B0CHW1   A0A182GXZ8   D1MLM5   A0A182HD51   A0A310SCK3   A0A1S4FQA8   A0A2P8Z0N2   A0A182JPR6   A0A084W4F2   Q16T82   A0A182W265   B0X4P1   A0A182M4X5   A0A182N9Q6   A0A182PK99   A0A0L7QJS2   A0A336LZR8   A0A182RMR2   A0A182QF22   A0A182IRK7   A0A1W4VN97   Q7PV52   W5JR65   A0A182FU91   A0A182UYA0   A0A1S4H925   A0A182XFR0   B3NDK3   A0A182HHS8   A0A182KLM5   A0A182TW65   B3MAC5   A0A0M5IZ21   A0A0M4EIU9   A0A182SVD6   A0A0L0CAP5   B4JZZ7   B4MX69   A0A182YBQ9   B4L0I4   Q2M1D8   B4GU95   A0A1I8M4I6   A0A3B0K6H6   Q9VUR8   A0A1I8Q2R4   B4QL46   B4HIH4   B4LII6   B4PCJ4   B4PCH6  

KEGG

101736618    K05628 arginine-glutamic acid dipeptide repeats protein | (RefSeq) atrophin-1-like

GO

GO:0005634   GO:0003677   GO:0006406   GO:0000347   GO:0006397   GO:0016021   GO:0005643   GO:0016973   GO:0000287   GO:0004674   GO:0005524  

PANTHER

PTHR21597  

Subcellular location

Nucleus  

Length:

426

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0887

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02404

outside

1  -  426

 

 

Pi

275.058106

Theta

201.907452

Tajima's D

0.985161

CLR

0

CSRT

0.660516974151292

Interpretation

Uncertain