SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04709  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009935
Annotation
glutathione_S-transferase_theta_1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.944 Mitochondrial   Reliability : 1.873
 

Sequence

CDS
ATGGTTTTAAAACTATATTATGATTTAATGTCGCAACCTTCGCGAGTACTCTACATATTATTAAAAACTATGAAATATGATTTCGAGCCGAAATATGTGAATTTACGAAAAGCGGAACACTATTCAGAGGATTTTACAAAAGTTAATAGAATGCAGCGAGTACCAGTTATAGATCACAATGGCTTCATTTTGACTGAAAGCATTGCAATACTGAAGTATTTATCTCGAGAGAATGTCATTGCTGAGAGTCTTTACTCTAAGGAATCCAAGCTTCAGGCCAGGATTGAAGAATTCCTTGAGTGGCAACATATAGGTCTTCGTTTGCACTGTGCCATGTATTTCAGAGTTGTGCATATGGACCCAATATTGACTGGAAGAAAATCAGACGAAAAAACTATACAGGGCTACAAGAGACGCATGATGATGGCCCTCGACGACTTCGACACTAAGTGGCTAGGCAGAGGAACTGCGTTTATTGTAGGCGAAACTCCTACTGTGGCGGATTTGGTCGCCGCCTGCGAATTGGAACAGCCAAGGATGGCCGGTTTTGAGCCCAAGGATCATTTCCCGAACATAGCGGCGTGGTGGCCGAAAGTGCGCGACCATTTTGCACCTCACTACGAAGACGCACACGTCATATTAAATAAAATTATCAATAAAATGGATCGTGCGGCTAATTCTAAACTTTAA
Protein
MVLKLYYDLMSQPSRVLYILLKTMKYDFEPKYVNLRKAEHYSEDFTKVNRMQRVPVIDHNGFILTESIAILKYLSRENVIAESLYSKESKLQARIEEFLEWQHIGLRLHCAMYFRVVHMDPILTGRKSDEKTIQGYKRRMMMALDDFDTKWLGRGTAFIVGETPTVADLVAACELEQPRMAGFEPKDHFPNIAAWWPKVRDHFAPHYEDAHVILNKIINKMDRAANSKL

Summary

Similarity
Belongs to the GST superfamily.
EMBL
EF506487    AB848737    ABS56975.1    BAO51944.1    BABH01039534    BABH01039535    + More
BABH01039536    ODYU01004207    SOQ43832.1    MH177609    AYM01181.1    KF482976    AIH07600.1    AK403198    BAM19624.1    KQ459784    KPJ19929.1    MG879013    AWX68893.1    GCVX01000109    JAI18121.1    KP938869    AKS40350.1    KX500036    ARM39006.1    KQ459595    KPI95695.1    AGBW02011413    OWR46701.1    KX229720    APW77581.1    KF929211    AHW45909.1    LJIG01022622    KRT79583.1    GL438491    EFN68893.1    GL764074    EFZ18617.1    GEZM01057456    GEZM01057453    JAV72327.1    LBMM01000666    KMQ97840.1    GFTR01003873    JAW12553.1    KQ435833    KOX71611.1    KQ982339    KYQ57318.1    KQ971357    EFA08560.1    KQ981625    KYN39085.1    GBGD01002742    JAC86147.1    KQ980107    KYN17653.1    KX609436    ARN17843.1    GFDG01000743    JAV18056.1    ADTU01015173    GBBI01001353    GEMB01001590    JAC17359.1    JAS01571.1    NNAY01001503    OXU23773.1    KQ977793    KYM99662.1    KQ415041    KOC58898.1    CH933810    KRF93897.1    KRF93898.1    GBGD01002766    JAC86123.1    GL447585    EFN86343.1    EDW06971.1    GAMD01002871    JAA98719.1    ACPB03021119    GAHY01001825    JAA75685.1    GDKW01002006    JAI54589.1    KR058858    ALG65075.1    KK852817    KDR15740.1    GECL01000112    JAP06012.1    GDIP01143813    GDIQ01053584    JAJ79589.1    JAN41153.1    KY773987    AVC68808.1    APCN01000984    KQ434782    KZC04623.1    KF680502    AHC08064.1    GDIP01135610    JAL68104.1    AF515526    AAAB01008847    AAM61893.1    EAA06860.1    AY070932    AAL48554.1    GDKW01002005    JAI54590.1    GGFM01004507    MBW25258.1    QCYY01002382    ROT70797.1    GU128145    ACY95465.1    GGFJ01009049    MBW58190.1    JN628445    AEY80033.1    AE014298    AAF50899.2    AHN59965.1    GAMC01015639    JAB90916.1    GALX01001357    JAB67109.1    GDIP01244867    JAI78534.1    KU522333    APX61052.1    GEDC01004276    JAS33022.1    BT032646    ACD81660.1    ACZ95341.1    GGFJ01009048    MBW58189.1    GGFK01008801    MBW42122.1    KQ976574    KYM80275.1    GAMC01015641    JAB90914.1    KQ763450    OAD55054.1    ADMH02000016    ETN68079.1    KZ288219    PBC32232.1    MF034834    AVT42200.1    AXCN02002441    GFDL01007498    JAV27547.1    KJ868751    AIL23552.1    UFQS01004021    UFQT01004021    SSX16105.1    SSX35434.1    CH940651    EDW65308.2    CH954180    EDV47544.1    CM000162    KRK07076.1   
Pfam
PF00043   GST_C        + More
PF02798   GST_N
PF13417   GST_N_3
PF14497   GST_C_3
Interpro
IPR040075   GST_N_Theta        + More
IPR036249   Thioredoxin-like_sf       
IPR040077   GST_C_Theta       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR004046   GST_C       
IPR010987   Glutathione-S-Trfase_C-like       
IPR040079   Glutathione_S-Trfase       
IPR004045   Glutathione_S-Trfase_N       
SUPFAM
SSF47616   SSF47616        + More
SSF52833   SSF52833       
PDB
2C3T     E-value=4.43929e-29,     Score=316

Ontologies

Topology

Length:
229
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01847
Exp number, first 60 AAs:
0.00142
Total prob of N-in:
0.03912
outside
1  -  229
 
 

Population Genetic Test Statistics

Pi
220.666216
Theta
186.791587
Tajima's D
0.608125
CLR
0.341363
CSRT
0.546822658867057
Interpretation
Uncertain
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