Silkworm Genome Informatics Database

Gene

KWMTBOMO04702

Annotation

PREDICTED:_G-protein_coupled_receptor_Mth2-like_[Amyelois_transitella]

Location

Bomo_Chr8(-):12702494-12730063 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.94

CDS

ATGTTGGTTAAAGTTTCGCTTCTATTTTCAATAACTTTGTCGTTTCGTTCAGTGGATTGTTTCGCTACCAAACTCAGTGAATTGGATATATGTAAAAATAAAATATGCATACCTAAATGCTGTGGTTTAGATAAATACGTGCACGGCAGAGATAGCAAGTGCGCCTACACCGATTTGAAGGATGCATTGAATTTTTCTAAAGTACCTGTCTACAAAGACGACTTAACAACGGTGGTAACAACGCTGACTGATCCGAGGTTCCATATGGTCGGGAATGTTTTCGAAGATGATGAATTCAAAAGTCTCGCCTACGACTTAAGTCGCACACGGATCTACAACTTTTTTTTATCTGAGACAGGTGTGCTCTACCTAGAGAAATCAAACTTTTACTTACGATGGACACCAAGGAACACTTCTAGATACTGCGTTGACTACAGAAAAGTGAAAAGCAAAAACGCCTCTGTGGCCTGGGAGGCACAATATCGTTTCTTTACTGTTATGGATCCTGTAGCTCAACCCGAAACCCAAACACTTTACAGAACTGCGCTGATGATTTCAAGTTTGTTTCTTTTAATTGTGCTTTTGGTCTACGCGATACTACCAGAGCTCAGGAACTTGGGTGGTTTGATTCTGATGGCATATGTAGGGAGTCTATTGTGCGCTTTCTTTTTGCTGTCTATCATACTGCTCGATATCAACTACAAAACAAACACTTGCATTGGAAGTACTATGGTGATATACTACAGTCTTATAGCAAGTTTTTGTTGGATGAACATCATGTCATACGACATTTGGTGGACATTTAGAGGATACGCTAAAGCAAGATCGATTCACCGTCGCGGTGAAATCTTCAAATTTCAAATGTACTGCTTGTATGGTTTTGGAGTACCTCTAGTCCTGACCATACTACTCGCTGTCATGCATTTCGTTGACTTTAGCGACCAGCCCTGGATAATCAAGCCACAGTTGGTACGCTACGGTTGCTTCATGGGAGGTCCCGAGAAAATGTTATACCTCTACGTACCGATGCTGATTCTAATCATGTGCAATTGGATGTTCTTCCTGATGACTGCTTTCAATGTGTGGCGGCTCAGTCGCGGTACGGCTGTCCTGGATTCGGCCGCTGCCGGAAACCCACACGCGCATCGCACTCAGAGACACAGGTTTATGGTGTATTTAAAGTTATCCATTGTGATGGGTATAAACTGGGTATTAGAAGTGGTTAGTTCTCAGCTCCCCGAGCTACAAATCTTCAAAGTTAGCGACCTATACAACGTCATGGTCGGCTTGTTCATATTCCTCATCTTCGTTTTCAAGAAGAAAATACTAAGGAAACTCATGAAAAAATTGCCGAACAAGAAGCGTTGGGCTCCGGCGTCGAAGAGCTACGAATCAGACAGCAGCACGTCAGACGGAAGCAGCCAAGAGACTTCCTTGCCTTTGGTTTGTTCAATCCCAAAGGGGCCTATCGAAAAGAGCACTTAA

Protein

MLVKVSLLFSITLSFRSVDCFATKLSELDICKNKICIPKCCGLDKYVHGRDSKCAYTDLKDALNFSKVPVYKDDLTTVVTTLTDPRFHMVGNVFEDDEFKSLAYDLSRTRIYNFFLSETGVLYLEKSNFYLRWTPRNTSRYCVDYRKVKSKNASVAWEAQYRFFTVMDPVAQPETQTLYRTALMISSLFLLIVLLVYAILPELRNLGGLILMAYVGSLLCAFFLLSIILLDINYKTNTCIGSTMVIYYSLIASFCWMNIMSYDIWWTFRGYAKARSIHRRGEIFKFQMYCLYGFGVPLVLTILLAVMHFVDFSDQPWIIKPQLVRYGCFMGGPEKMLYLYVPMLILIMCNWMFFLMTAFNVWRLSRGTAVLDSAAAGNPHAHRTQRHRFMVYLKLSIVMGINWVLEVVSSQLPELQIFKVSDLYNVMVGLFIFLIFVFKKKILRKLMKKLPNKKRWAPASKSYESDSSTSDGSSQETSLPLVCSIPKGPIEKST

Uniprot

A0A194PX16 A0A3S2M451 A0A1E1W882 A0A2A4J442 A0A1B6KQY4 A0A1B6JBW8 + More

Pubmed

26354079

EMBL

KQ459595 KPI95685.1 RSAL01000041 RVE50934.1 GDQN01007885 JAT83169.1 + More
NWSH01003352 PCG66496.1 GEBQ01026124 JAT13853.1 GECU01011109 GECU01002381 JAS96597.1 JAT05326.1

Proteomes

UP000053268 UP000283053 UP000218220

Pfam

PF05773   RWD        + More
PF14529   Exo_endo_phos_2
PF00002   7tm_2
PF00078   RVT_1
PF06652   Methuselah_N

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR017981   GPCR_2-like
IPR016135   UBQ-conjugating_enzyme/RWD
IPR001841   Znf_RING
IPR006575   RWD-domain
IPR000477   RT_dom
IPR036691   Endo/exonu/phosph_ase_sf
IPR000832   GPCR_2_secretin-like
IPR005135   Endo/exonuclease/phosphatase
IPR036272   Methuselah_N_sf
IPR010596   Methuselah_N_dom

SUPFAM

SSF54495   SSF54495        + More
SSF56219   SSF56219
SSF63877   SSF63877

Gene 3D

3.10.110.10 3.30.40.10 3.60.10.10

ProteinModelPortal

A0A194PX16 A0A3S2M451 A0A1E1W882 A0A2A4J442 A0A1B6KQY4 A0A1B6JBW8 + More

KEGG

101746663 no KO assigned | (RefSeq) probable G-protein coupled receptor Mth-like 6

GO

GO:0004888 GO:0016021 GO:0007166 GO:0004930 GO:0007186 GO:0016020 GO:0035023 GO:0005515 GO:0016742 GO:0003824

SignalP

Position: 1 - 20, Likelihood: 0.980322

Length:

494

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

151.02044

Exp number, first 60 AAs:

0.00487

Total prob of N-in:

0.00261

outside

1 - 177

TMhelix

178 - 200

inside

201 - 206

TMhelix

207 - 229

outside

230 - 243

TMhelix

244 - 266

inside

267 - 287

TMhelix

288 - 310

outside

311 - 339

TMhelix

340 - 362

inside

363 - 388

TMhelix

389 - 408

outside

409 - 422

TMhelix

423 - 438

inside

439 - 494

Pi

228.813987

Theta

156.018478

Tajima's D

1.536442

CLR

0.348086

CSRT

0.794410279486026

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics