SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04701
Annotation
PREDICTED:_probable_G-protein_coupled_receptor_Mth-like_2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.123
 

Sequence

CDS
ATGTTCTCAACGAGACCCGAAGGCAAATCAAACGTTGTAATTTGCGTGAAAACTGACACAAATGAGGAGAACGATCGTTTAATGAAGTTCTATGGCAACGGTTACAAGAACGGAACGGCCGCCACAAATACCACGCTTAAGAATTTCCAACTGGTGCACAGCAAGACTTACCTAGACAGAAACTGTTACCATCATCAGTGGCATCCTAGGTCTCTGAAACATTACAATTTAGAGAACGGTAAGCTCGCCAAAGAAGCCCTATTCGAATTTTCCGATAAAAGATGGCAGGAGTACGAAATGTTGACATTCTGTTATGACATTATAAAAAAGAATGGATTGAGTCCGGTATATTTTGTTCGTGGTGATATATCGAATGCTGAACTCACATCATTACAGGTTATATTGCAAACAATAGCACACGCAACAAGCTGCGTATTTCTTTTGTTAGGTATCATAATTAATTTCTTAATTGGTAAATACAAGATTAACAAAGATAAAGCTTTCATGGCGCAGATGATAAGCCTCTTCATAATGTATTTGATTCAACTAATCAGCACATTGACAAAGTATTGCAGTTGGTTAGGTACTGTCAAATACTTCGTAATATTGAGCAACATATTCTGGATAAACGTCGGGTCATATCATATTTGGCAAAAATTCAGGTATTTACCCTATTTCATTTTGAAAATATACCCAGAAGCGTAG
Protein
MFSTRPEGKSNVVICVKTDTNEENDRLMKFYGNGYKNGTAATNTTLKNFQLVHSKTYLDRNCYHHQWHPRSLKHYNLENGKLAKEALFEFSDKRWQEYEMLTFCYDIIKKNGLSPVYFVRGDISNAELTSLQVILQTIAHATSCVFLLLGIIINFLIGKYKINKDKAFMAQMISLFIMYLIQLISTLTKYCSWLGTVKYFVILSNIFWINVGSYHIWQKFRYLPYFILKIYPEA

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
234
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
61.80996
Exp number, first 60 AAs:
0.00162
Total prob of N-in:
0.22816
outside
1  -  137
TMhelix
138  -  160
inside
161  -  166
TMhelix
167  -  184
outside
185  -  198
TMhelix
199  -  217
inside
218  -  234
 
 

Population Genetic Test Statistics

Pi
225.235506
Theta
171.683158
Tajima's D
1.074488
CLR
0.020089
CSRT
0.68381580920954
Interpretation
Uncertain
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