Gene

KWMTBOMO04699

Pre Gene Modal

BGIBMGA009811

Annotation

PREDICTED:_E3_ubiquitin-protein_ligase_RNF25_[Amyelois_transitella]

Location

Bomo_Chr8(-):12673005-12677583      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.073

CDS

ATGTCGTCCTCCGGCGATGAAAGAATCACGGACGAGGTGCAAGCATTAGAAGCAATTCTACTGAAAGATGTGGTAGTAAAACGCGTTGGAGATGTCCCAAAATACATAATTGAAACGATCATCCATCCGTTGACGGGGGATAATATCGATCAGCAATATGTATGTGTGACTCTGGAGGTGGGGTTGTCTTCTGGCTATCCAGACACCAGCCCAGAAGTAGCGCTCAAAAACCCTAGAGGTCTAGATGATATGATTTTAGACACTATCAACACACATATTCAAGACAAATTGAAAAATAATTTGGGACAACCAATAGTGTTTGAACTTATTGGAATTGTACGTGATCATCTGACTAAGAGCAATCTTCCTCGTGGCCAGTGTGTCATATGCCTATATGATTTTGTCGATGGTGATTTGTTTATAAAGACGCAATGCTATCATTACTTCCACAATCATTGCCTTGCAAACCATTTCATCGCTGGCAAGAAATATTATCACGAGGAACTTGAGAAACTACCTACTTGGCAACAGATGCAAGTGCCACCTTACCAGCAAACATGCCCGGTGTGTCGTTGCACGGTATCATGTGACGTGGACACTTTAAAGGAGGCTCCCCCACCAAAGAGCTCCCTGTCGGCACCACCGTTCCGCTTGACAGCTGAACTAAAAGAACTCCAAATGAAGATGGCCGAACTGTTAGCTGTGCAAGTTGCTAAGGGCGGGGTCGTCGGTATGGGCGACAATGGGCCCCCCCTGCTGACCATCACAACCACACCCACTACTGACAACGTAAATATATAA

Protein

MSSSGDERITDEVQALEAILLKDVVVKRVGDVPKYIIETIIHPLTGDNIDQQYVCVTLEVGLSSGYPDTSPEVALKNPRGLDDMILDTINTHIQDKLKNNLGQPIVFELIGIVRDHLTKSNLPRGQCVICLYDFVDGDLFIKTQCYHYFHNHCLANHFIAGKKYYHEELEKLPTWQQMQVPPYQQTCPVCRCTVSCDVDTLKEAPPPKSSLSAPPFRLTAELKELQMKMAELLAVQVAKGGVVGMGDNGPPLLTITTTPTTDNVNI

Uniprot

A0A3S2PGP9   A0A194QUF4   A0A194PX16   A0A2A4IUG3   A0A212FA89   A0A2H1V0J5   + More
E2BKN7   A0A2A3EHP2   V9IHQ8   A0A088ANP8   A0A3L8E001   A0A026X2H9   A0A0L7R149   A0A0J7KVX0   E2AFI1   A0A195CTI8   A0A151XG69   A0A310SXS8   A0A182JIR8   B0WTE6   A0A1I8MGJ8   A0A182GZS7   A0A1S4FTL6   Q0IEB3   A0A3B0J5R2   A0A182TRH5   A0A182UMM5   A0A182WZM3   B4N5W9   Q7Q096   A0A182HQ69   A0A182U045   A0A182QC07   A0A084WHJ1   A0A182Y1N9   A0A182MYN9   A0A182KSI0   A0A154PB13   B3MHF5   A0A067RR42   A0A182K3C1   J3JVA2   A0A232F5M5   A0A0L0BSR7   A0A1I8NX45   K7IV54   A0A1B0BLN5   B4GGS3   A0A1A9Y660   B5E0Y1   A0A1A9VXI0   A0A336KUQ1   A0A1W4V4A2   A0A1B0A7E3   A0A1B0FKY3   A0A0N0BEB7   A0A182LXV0   A0A182WG66   B4HQY2   W5JGG0   A0A182RTJ5   B4QEV3   A0A1A9W9U0   A8WHE3   A1Z9I6   A0A182FW62   D0IQC3   A0A151JPX0   A0A2M4AWX2   B3NRF9   A0A195BZ22   A0A0J9RD95   A0A195F0D9   E9IK81   B4P454   D7EJZ3   A0A2M4AWF3   A0A182P6I6   A0A2J7PU62   B4KTB2   A0A224XTY9   A0A0K8VBF5   A0A034WHM0   A0A0K8U6C7   A0A0A1WMP1   A0A0M3QUS6   A0A1B6CUG0   A0A2J7PU36   Q7K199   A0A0A9YWV5   B4LJF6   B4JW25   A0A1B6GI42   W8B4X8   A0A1B6IK36   A0A182SXY6   A0A2R7W482   A0A2P8YR14   A0A1B6LJV0  

Pubmed

26354079    22118469    20798317    30249741    24508170    25315136    + More
26483478    17510324    17994087    12364791    14747013    17210077    24438588    25244985    20966253    24845553    22516182    23537049    28648823    26108605    20075255    15632085    20920257    23761445    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21282665    17550304    18362917    19820115    25348373    25830018    25401762    26823975    24495485    29403074   

EMBL

RSAL01000041    RVE50932.1    KQ461154    KPJ08610.1    KQ459595    KPI95685.1    + More
NWSH01006493    PCG63395.1    AGBW02009506    OWR50656.1    ODYU01000121    SOQ34357.1    GL448819    EFN83735.1    KZ288254    PBC30792.1    JR048385    AEY60648.1    QOIP01000002    RLU25882.1    KK107026    EZA62201.1    KQ414668    KOC64573.1    LBMM01002582    KMQ94627.1    GL439108    EFN67874.1    KQ977304    KYN03807.1    KQ982174    KYQ59347.1    KQ759767    OAD62959.1    DS232085    EDS34384.1    JXUM01002155    JXUM01002156    JXUM01002157    CH477764    EAT36498.1    OUUW01000001    SPP75022.1    CH964154    EDW79758.1    AAAB01008986    EAA00366.4    APCN01003297    AXCN02001035    ATLV01023841    KE525347    KFB49685.1    KQ434850    KZC08574.1    CH902619    EDV37955.1    KK852473    KDR23110.1    APGK01055664    BT127169    KB741269    KB632330    AEE62131.1    ENN71428.1    ERL92600.1    NNAY01000950    OXU25763.1    JRES01001421    KNC23061.1    AAZX01007538    JXJN01014763    JXJN01016503    CH479183    EDW35693.1    CM000071    EDY69062.1    UFQS01000845    UFQT01000845    SSX07245.1    SSX27588.1    CCAG010009481    KQ435833    KOX71654.1    AXCM01001617    CH480816    EDW47779.1    ADMH02001285    ETN63176.1    CM000362    CM002911    EDX06980.1    KMY93588.1    BT031089    ABX00711.1    AE013599    AAF58321.2    AAZ52807.2    BT100161    ACY07066.1    KQ978744    KYN28698.1    GGFK01011975    MBW45296.1    CH954179    EDV56111.1    KQ976394    KYM93176.1    KMY93589.1    KQ981880    KYN33943.1    GL763924    EFZ19029.1    CM000158    EDW90564.2    KQ972213    EFA12922.2    GGFK01011802    MBW45123.1    NEVH01021208    PNF19856.1    CH933808    EDW10624.1    GFTR01004444    JAW11982.1    GDHF01016454    JAI35860.1    GAKP01005714    JAC53238.1    GDHF01030102    JAI22212.1    GBXI01014599    JAC99692.1    CP012524    ALC41179.1    GEDC01020435    JAS16863.1    PNF19855.1    AY069251    AAL39396.1    GBHO01034308    GBHO01006930    GBRD01009174    GDHC01004518    GDHC01000143    JAG09296.1    JAG36674.1    JAG56647.1    JAQ14111.1    JAQ18486.1    CH940648    EDW60536.1    CH916375    EDV98163.1    GECZ01007665    JAS62104.1    GAMC01014417    JAB92138.1    GECU01020438    JAS87268.1    KK854313    PTY14527.1    PYGN01000420    PSN46697.1    GEBQ01016012    JAT23965.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000218220    UP000007151    UP000008237    + More
UP000242457    UP000005203    UP000279307    UP000053097    UP000053825    UP000036403    UP000000311    UP000078542    UP000075809    UP000075880    UP000002320    UP000095301    UP000069940    UP000008820    UP000268350    UP000075902    UP000075903    UP000076407    UP000007798    UP000007062    UP000075840    UP000075886    UP000030765    UP000076408    UP000075884    UP000075882    UP000076502    UP000007801    UP000027135    UP000075881    UP000019118    UP000030742    UP000215335    UP000037069    UP000095300    UP000002358    UP000092460    UP000008744    UP000092443    UP000001819    UP000078200    UP000192221    UP000092445    UP000092444    UP000053105    UP000075883    UP000075920    UP000001292    UP000000673    UP000075900    UP000000304    UP000091820    UP000000803    UP000069272    UP000078492    UP000008711    UP000078540    UP000078541    UP000002282    UP000007266    UP000075885    UP000235965    UP000009192    UP000092553    UP000008792    UP000001070    UP000075901    UP000245037   

PRIDE

A1Z9I6    Q7K199   

Pfam

PF05773   RWD        + More
PF17123   zf-RING_11
PF13639   zf-RING_2

Interpro

IPR001841   Znf_RING        + More
IPR006575   RWD-domain       
IPR039133   RNF25       
IPR013083   Znf_RING/FYVE/PHD       
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR017981   GPCR_2-like       

SUPFAM

SSF54495   SSF54495       

Gene 3D

3.10.110.10     3.30.40.10    

ProteinModelPortal

A0A3S2PGP9   A0A194QUF4   A0A194PX16   A0A2A4IUG3   A0A212FA89   A0A2H1V0J5   + More
E2BKN7   A0A2A3EHP2   V9IHQ8   A0A088ANP8   A0A3L8E001   A0A026X2H9   A0A0L7R149   A0A0J7KVX0   E2AFI1   A0A195CTI8   A0A151XG69   A0A310SXS8   A0A182JIR8   B0WTE6   A0A1I8MGJ8   A0A182GZS7   A0A1S4FTL6   Q0IEB3   A0A3B0J5R2   A0A182TRH5   A0A182UMM5   A0A182WZM3   B4N5W9   Q7Q096   A0A182HQ69   A0A182U045   A0A182QC07   A0A084WHJ1   A0A182Y1N9   A0A182MYN9   A0A182KSI0   A0A154PB13   B3MHF5   A0A067RR42   A0A182K3C1   J3JVA2   A0A232F5M5   A0A0L0BSR7   A0A1I8NX45   K7IV54   A0A1B0BLN5   B4GGS3   A0A1A9Y660   B5E0Y1   A0A1A9VXI0   A0A336KUQ1   A0A1W4V4A2   A0A1B0A7E3   A0A1B0FKY3   A0A0N0BEB7   A0A182LXV0   A0A182WG66   B4HQY2   W5JGG0   A0A182RTJ5   B4QEV3   A0A1A9W9U0   A8WHE3   A1Z9I6   A0A182FW62   D0IQC3   A0A151JPX0   A0A2M4AWX2   B3NRF9   A0A195BZ22   A0A0J9RD95   A0A195F0D9   E9IK81   B4P454   D7EJZ3   A0A2M4AWF3   A0A182P6I6   A0A2J7PU62   B4KTB2   A0A224XTY9   A0A0K8VBF5   A0A034WHM0   A0A0K8U6C7   A0A0A1WMP1   A0A0M3QUS6   A0A1B6CUG0   A0A2J7PU36   Q7K199   A0A0A9YWV5   B4LJF6   B4JW25   A0A1B6GI42   W8B4X8   A0A1B6IK36   A0A182SXY6   A0A2R7W482   A0A2P8YR14   A0A1B6LJV0  

PDB

2DMF     E-value=8.81247e-16,     Score=202

KEGG

101745961    K10640 E3 ubiquitin-protein ligase RNF25 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RNF25

GO

GO:0061630   GO:0016874   GO:0004888   GO:0016021   GO:0007166   GO:0005634   GO:0016567   GO:0051092   GO:0008270   GO:0004842   GO:0005515   GO:0006260   GO:0006281   GO:0006310   GO:0017070   GO:0035023   GO:0016742   GO:0003824  

PANTHER

PTHR13198  

Length:

266

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00649

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04829

outside

1  -  266

 

 

Pi

181.219299

Theta

178.902528

Tajima's D

-0.429042

CLR

11.7967

CSRT

0.251287435628219

Interpretation

Uncertain