Gene

KWMTBOMO04695

Pre Gene Modal

BGIBMGA009812

Annotation

PREDICTED:_differentially_expressed_in_FDCP_6-like_[Amyelois_transitella]

Location

Bomo_Chr8(-):12616678-12621898      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.611 Cytoskeletal   Reliability : 1.009 Nuclear   Reliability : 1.311

CDS

ATGCGTGAATACTGGTGCGTGCTTCAGCCCTGCGCCCTCACATACTACAAGAGCTCGTCGCAGAAGGAGCAATGCGGCAGGATCGTCATAGACGAGTACTGTTCGGTGGAAGCATCGGCAGGAGACGGGAAGATACAGCGCTTCCAACTCATCACACCTGATCGGACTTTTGAGTTCGGCACTCAGGATCATAAAAGTCGCCTCCAATGGATATCGTCGTTGCGTCAAGCGACCGCAGTCTCGGGTGGTGCTGAAGGCTATCAGCGCAGAGCGAGGGCTGGGAGAAGAGGAGCTGGGGCCAGGAGAGAGAAGGAAGCACGAGAAACGAAAGCCAGACTGCAGCATGAAGTTAGAGCCAGACTAGCAGCTGAAGCACAAGCACAGGAACTAGCAGAGCTATGTGAACAGGACAACAAGAAGCTAGAAGAACTGAGAAACGCACAAATCGAACTCGAGAAACTGTTGCAGGAGGAGACCCAGGCCAAACGAGACGAAGAGATTGTAAGGGCCCTACAAGCAAGAGTATTAGCCGAAGAATGGGAAAGGCGCGAAGAATTAGAACGTTTGCAAGAAGAACAAAACAGAATGCTGGAAGAAGAAAGAATGAAACGTAAACAATTCGAAATTTTACAGGCAGAGAAAGAAGCACAATATAAAGAAGCGGCACAGCGTTTGAAAGACCTTGAAGATGAGAAGCAGAGGCTGGACGCTGAACTGAAAGCGGCTCAGGAGAAGATATCGAAGACTGAACTAACGGCGCACGCGCTACATGTACAATTGAGGGATCTGAGTCCGGCGTTACGTAACGGGGAGAGAGCGAGACGGGCTGTGTCCTTCGTGCCGACCACGAAGAGCTCATCCGACACCCTCATCGACATCAAAGCCATCCGCCACTCGAAGGTGATCGATAACAATGAAAACGTTTGA

Protein

MREYWCVLQPCALTYYKSSSQKEQCGRIVIDEYCSVEASAGDGKIQRFQLITPDRTFEFGTQDHKSRLQWISSLRQATAVSGGAEGYQRRARAGRRGAGARREKEARETKARLQHEVRARLAAEAQAQELAELCEQDNKKLEELRNAQIELEKLLQEETQAKRDEEIVRALQARVLAEEWERREELERLQEEQNRMLEEERMKRKQFEILQAEKEAQYKEAAQRLKDLEDEKQRLDAELKAAQEKISKTELTAHALHVQLRDLSPALRNGERARRAVSFVPTTKSSSDTLIDIKAIRHSKVIDNNENV

Uniprot

H9JJW1   A0A2A4ITN1   A0A2A4JE48   A0A2H1V0S1   A0A212FA78   A0A2A4JEH6   + More
A0A194QTH0   A0A194PRV1   A0A1B0DP54   A0A1L8DV35   A0A1L8DV31   D6WYK8   A0A1Y1M8C8   A0A0C9PQL1   E2BKC9   K7IRU2   A0A151JQV3   E1ZZE2   E9ID97   A0A195BXH2   A0A026W3D5   A0A195CPX0   A0A3L8DBV7   A0A158NWP1   A0A195FPR1   A0A0J7KSS4   E0VU53   U4UTB7   A0A1B0CIX4   A0A0T6B4Y7   N6TDY9   A0A232FHF5   A0A1B6L3D9   A0A023F3R7   A0A224XP69   A0A0K2U676   A0A151WSS5   T1HMF8   A0A224Y904   V5HNP7   A0A131YXS5  

Pubmed

19121390    22118469    26354079    18362917    19820115    28004739    + More
20798317    20075255    21282665    24508170    30249741    21347285    20566863    23537049    28648823    25474469    28797301    25765539    26830274   

EMBL

BABH01040642    BABH01040643    BABH01040644    NWSH01007111    PCG63081.1    NWSH01001798    + More
PCG70109.1    ODYU01000121    SOQ34356.1    AGBW02009506    OWR50655.1    PCG70108.1    KQ461154    KPJ08609.1    KQ459595    KPI95683.1    AJVK01018087    AJVK01018088    GFDF01003805    JAV10279.1    GFDF01003804    JAV10280.1    KQ971362    EFA09002.1    GEZM01037769    JAV81944.1    GBYB01003513    JAG73280.1    GL448783    EFN83853.1    KQ978622    KYN29737.1    GL435343    EFN73434.1    GL762454    EFZ21431.1    KQ976401    KYM92648.1    KK107455    EZA50538.1    KQ977444    KYN02756.1    QOIP01000010    RLU17388.1    ADTU01028285    KQ981335    KYN42580.1    LBMM01003642    KMQ93284.1    DS235780    EEB16909.1    KB632356    ERL93421.1    AJWK01013857    LJIG01009750    KRT82456.1    APGK01041556    KB740994    ENN75968.1    NNAY01000187    OXU30174.1    GEBQ01021725    JAT18252.1    GBBI01002662    JAC16050.1    GFTR01006196    JAW10230.1    HACA01016056    CDW33417.1    KQ982769    KYQ50930.1    ACPB03023598    GFPF01000903    MAA12049.1    GANP01009085    JAB75383.1    GEDV01005826    JAP82731.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000092462    + More
UP000007266    UP000008237    UP000002358    UP000078492    UP000000311    UP000078540    UP000053097    UP000078542    UP000279307    UP000005205    UP000078541    UP000036403    UP000009046    UP000030742    UP000092461    UP000019118    UP000215335    UP000075809    UP000015103   

PRIDE

H9JJW1   

Pfam

PF00169   PH        + More
PF00160   Pro_isomerase
PF14772   NYD-SP28

Interpro

IPR001849   PH_domain        + More
IPR011993   PH-like_dom_sf       
IPR020892   Cyclophilin-type_PPIase_CS       
IPR029000   Cyclophilin-like_dom_sf       
IPR003613   Ubox_domain       
IPR002130   Cyclophilin-type_PPIase_dom       
IPR013083   Znf_RING/FYVE/PHD       
IPR039505   DRC1/2_N       

SUPFAM

SSF50891   SSF50891       

Gene 3D

2.30.29.30     2.40.100.10     3.30.40.10    

ProteinModelPortal

H9JJW1   A0A2A4ITN1   A0A2A4JE48   A0A2H1V0S1   A0A212FA78   A0A2A4JEH6   + More
A0A194QTH0   A0A194PRV1   A0A1B0DP54   A0A1L8DV35   A0A1L8DV31   D6WYK8   A0A1Y1M8C8   A0A0C9PQL1   E2BKC9   K7IRU2   A0A151JQV3   E1ZZE2   E9ID97   A0A195BXH2   A0A026W3D5   A0A195CPX0   A0A3L8DBV7   A0A158NWP1   A0A195FPR1   A0A0J7KSS4   E0VU53   U4UTB7   A0A1B0CIX4   A0A0T6B4Y7   N6TDY9   A0A232FHF5   A0A1B6L3D9   A0A023F3R7   A0A224XP69   A0A0K2U676   A0A151WSS5   T1HMF8   A0A224Y904   V5HNP7   A0A131YXS5  

PDB

2DN6     E-value=8.62294e-07,     Score=125

KEGG

101746524    no KO assigned | (RefSeq) switch-associated protein 70-like

GO

GO:0005634   GO:0005737   GO:0006457   GO:0003755   GO:0004842  

Length:

308

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00017

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02813

outside

1  -  308

 

 

Pi

37.280466

Theta

36.890634

Tajima's D

-0.648546

CLR

0.409487

CSRT

0.212439378031098

Interpretation

Uncertain