Silkworm Genome Informatics Database

Gene

KWMTBOMO04694

Pre Gene Modal

BGIBMGA009819

Annotation

hypothetical_protein_KGM_22134_[Danaus_plexippus]

Location

Bomo_Chr8(+):12609649-12612544 View in EpiBrowser

Full name

Dynein regulatory complex protein 10

Alternative Name

IQ domain-containing protein D

Location in the cell

Cytoplasmic Reliability : 1.669 Nuclear Reliability : 1.323

CDS

ATGGTGCTTGCCTCACGAGCGCACGCCGTCAAGAACGATATGCTCAAAGAAGAAGAAAACGAATGCAAGGAGGCATACGAGAACTTGCTCCGGACTCACCTCGCCGATGAGAAGAATCAGAGGGCCCGAAGGTTCAAAGTCGAGACGCAGCTGTTGTCCTGGCTTCAGAAATACGATCTCGAGATGGGCGAGAAGCAAATCGAACTCGATGAGCTTACGGAGAAGTACGAAGACGAATTACAGAAATGTGAAGTTTTGGAGCAAAAACTAGCCGAACAAGACAAAGAGTACATTCCTCTGATGGCAGAGAGGGAAGAGGAATACCACAAGGAGATGACGGAGAAGATGAACAAGTTCATGCTGGAGCACGCGGCCAGGGTCATTCAGACCGCATGGAGAGACGTACTGGCTAATCGAGCCGAAAAGAAGAAGCATCAAAAGGGAAGAGCTAAGAAAGGCAAGAAGAAGACGTAA

Protein

MVLASRAHAVKNDMLKEEENECKEAYENLLRTHLADEKNQRARRFKVETQLLSWLQKYDLEMGEKQIELDELTEKYEDELQKCEVLEQKLAEQDKEYIPLMAEREEEYHKEMTEKMNKFMLEHAARVIQTAWRDVLANRAEKKKHQKGRAKKGKKKT

Description

Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes.

Subunit

Component of the nexin-dynein regulatory complex (N-DRC).

Similarity

Belongs to the DRC10 family.

Keywords

Alternative splicing Cell projection Cilium Coiled coil Complete proteome Cytoplasm Cytoskeleton Flagellum Reference proteome

Feature

chain Dynein regulatory complex protein 10
splice variant In isoform 2.

Uniprot

H9JJW8 A0A3S2LP70 A0A212FA91 A0A2A4IV73 A0A2H1V0I2 A0A194PQU5 + More
A0A194QSW2 A0A0L7LU75 D6WYK9 A0A1S3H6Y0 F6P8U0 A0A0L0S7Q4 Q503L3 Q9D3V1-2 W4Y9B7

Pubmed

19121390 22118469 26354079 26227816 18362917 19820115 + More
23594743 16141072 15489334

EMBL

BABH01040642 RSAL01000041 RVE50930.1 AGBW02009506 OWR50654.1 NWSH01007111 + More
NWSH01001798 PCG63082.1 PCG70110.1 ODYU01000121 SOQ34355.1 KQ459595 KPI95682.1 KQ461154 KPJ08608.1 JTDY01000075 KOB79010.1 KQ971362 EFA07861.2 BX640521 BX640539 GG745333 KNE58394.1 BC095280 AAH95280.1 AK017032 AK076996 BC100441 BC125429 AAGJ04004614

Proteomes

UP000005204 UP000283053 UP000007151 UP000218220 UP000053268 UP000053240 + More
UP000037510 UP000007266 UP000085678 UP000000437 UP000054350 UP000000589 UP000007110

PRIDE

H9JJW8 Q9D3V1

Pfam

PF00612 IQ

Interpro

IPR000048 IQ_motif_EF-hand-BS

ProteinModelPortal

H9JJW8 A0A3S2LP70 A0A212FA91 A0A2A4IV73 A0A2H1V0I2 A0A194PQU5 + More
A0A194QSW2 A0A0L7LU75 D6WYK9 A0A1S3H6Y0 F6P8U0 A0A0L0S7Q4 Q503L3 Q9D3V1-2 W4Y9B7

KEGG

101745821 no KO assigned | (RefSeq) IQ domain-containing protein D-like

GO

GO:0031514 GO:0005856 GO:0005737

Subcellular location

Length:

157

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00057

Exp number, first 60 AAs:

0

Total prob of N-in:

0.32751

outside

1 - 157

Pi

26.319337

Theta

33.472888

Tajima's D

-1.003929

CLR

0.335496

CSRT

0.138843057847108

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics