Gene

KWMTBOMO04686

Pre Gene Modal

BGIBMGA014033

Annotation

PREDICTED:_mucin-1-like?_partial_[Bombyx_mori]

Location

Bomo_Chr8(-):12191405-12199018      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.791

CDS

ATGCGCTCACTTGCCGCTAGGTACAACGCGCAACCGAATAACGATTATTTTCATCGCATGAATGGCTACGGAGCGGAGGCCCGGGCTGCGACGCCGGCGCAAGCGGACACAATCGACGCGCCCCTCGGAGGCCTGTTCGCAAAATTGGCCAAACAACAGGGAGGTCCTCCAAGACTACCAGCATTTCCAGTCATGTTCGACATGAGCTCCACAAAGACTTTATTAGCGATCTCGCGGATCAGTCGAAGCGGGAGGTCGCGTCGCAAACGCACAGGAGCGACCGGATCGACCGCGGAGCACAGTCCTCTGGACCTCTCCGCAGCTGGTGAGAGTGCCGCGAAAAGGGCTCGACTCTCGGCCAGCCCCAGCGCCAGGAGTGACAGCGACGACCGGGATAGAGTCTCCACTGATGGTCGTAGCGAGCCCCGGGGGGAGTGTCTGTGCGCGGAAGCTAGAGCGCGTCTTTCGGCTTGGTCCGTCGATGACGTCTGCGATTTCGTCAATTCTATCGATATCTGCGCCGAATACGCATCGTGA

Protein

MRSLAARYNAQPNNDYFHRMNGYGAEARAATPAQADTIDAPLGGLFAKLAKQQGGPPRLPAFPVMFDMSSTKTLLAISRISRSGRSRRKRTGATGSTAEHSPLDLSAAGESAAKRARLSASPSARSDSDDRDRVSTDGRSEPRGECLCAEARARLSAWSVDDVCDFVNSIDICAEYAS

Uniprot

A0A3S2NWT1   A0A2H1WES2   A0A194PQT6   A0A212FBL8   A0A194QYE3   A0A0J7NWL7   + More
A0A158NFK9   A0A026WS61   A0A3L8DEQ9   A0A139WCH3   A0A0T6BGF8   A0A0L7R7D3   E2AS63   A0A195D894   A0A2A3EKB0   A0A088AEN5   A0A151X579   A0A151J702   F4X0E4   A0A151K242   A0A0N0BDS8   A0A154PQI4   A0A2J7R1D9   A0A1W4WTR1   A0A1W4WUR6   A0A1Y1KHN5  

Pubmed

26354079    22118469    21347285    24508170    30249741    18362917    + More
19820115    20798317    21719571    28004739   

EMBL

RSAL01000041    RVE50922.1    ODYU01008188    SOQ51578.1    KQ459595    KPI95672.1    + More
AGBW02009298    OWR51129.1    KQ461154    KPJ08596.1    LBMM01001157    KMQ96810.1    ADTU01014602    ADTU01014603    ADTU01014604    ADTU01014605    ADTU01014606    ADTU01014607    ADTU01014608    ADTU01014609    ADTU01014610    ADTU01014611    KK107119    EZA58793.1    QOIP01000009    RLU18776.1    KQ971363    KYB25668.1    LJIG01000606    KRT86334.1    KQ414640    KOC66792.1    GL442229    EFN63693.1    KQ976750    KYN08664.1    KZ288230    PBC31626.1    KQ982536    KYQ55439.1    KQ979748    KYN19335.1    GL888497    EGI60102.1    KQ981163    KYN45401.1    KQ435855    KOX70622.1    KQ435039    KZC14161.1    NEVH01008208    PNF34646.1    GEZM01083877    JAV60963.1   

Proteomes

UP000283053    UP000053268    UP000007151    UP000053240    UP000036403    UP000005205    + More
UP000053097    UP000279307    UP000007266    UP000053825    UP000000311    UP000078542    UP000242457    UP000005203    UP000075809    UP000078492    UP000007755    UP000078541    UP000053105    UP000076502    UP000235965    UP000192223   

Pfam

PF00536   SAM_1

Interpro

IPR013761   SAM/pointed_sf        + More
IPR001660   SAM       

SUPFAM

SSF47769   SSF47769       

Gene 3D

1.10.150.50    

ProteinModelPortal

A0A3S2NWT1   A0A2H1WES2   A0A194PQT6   A0A212FBL8   A0A194QYE3   A0A0J7NWL7   + More
A0A158NFK9   A0A026WS61   A0A3L8DEQ9   A0A139WCH3   A0A0T6BGF8   A0A0L7R7D3   E2AS63   A0A195D894   A0A2A3EKB0   A0A088AEN5   A0A151X579   A0A151J702   F4X0E4   A0A151K242   A0A0N0BDS8   A0A154PQI4   A0A2J7R1D9   A0A1W4WTR1   A0A1W4WUR6   A0A1Y1KHN5  

KEGG

105841829    no KO assigned | (RefSeq) mucin-1-like

GO

Length:

178

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.08431

Exp number, first 60 AAs:

0.00604

Total prob of N-in:

0.27802

outside

1  -  178

 

 

Pi

228.89151

Theta

196.381037

Tajima's D

0.797043

CLR

0.161138

CSRT

0.610119494025299

Interpretation

Uncertain