SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04684
Pre Gene Modal
BGIBMGA005524
Annotation
PREDICTED:_UNC93-like_protein_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 4.952
 

Sequence

CDS
ATGCCGGAAGAAACAATAACTTTTAGTTCAAATGAGAAATGGCGTATAAACCGGAACGTATTCGTTCTTGGTTTCGCTTTCATGATCCACTTCACGGCCTTCCACGGGACCGCCAACCTCCAGAGCTCCGTGAACAGCGACGACGGAGCCGGCACCTTCACCCTGGCCGCCATTTACTTCTCCCTGATCCTCTCGAATATATTATTACCCGCTGTTGTCATTAAGTGGCTTGGTTGCAAATGGACAGTGTCAATGTCCTTCATCACGTATATGCCGTTCATAGCAGCGCAGTTTTATCCGAAGTTGTATACACTGATACCAGCCGGCATGATGGTCGGCTTTGGTGGCGGACCACTCTGGTGCGCTAAATGCACTTATCTTTCTGTGATATCCGAACCGTATTCTAAATTATCAGGAATTCCAGCTGAAGTTTTGGTGGTGAGGTTCTTCGGGCTGTTCTTCATGTTCTACCAGATGGCGCAAATATGGGGAAATCTTATATCTTCTGCGATTTTATCGTCATCTCTAGGAGAGGCGCCGTTTTTGAACGAAACTATTCCGTCTACTGCGATGACGCTGATCACTAACGCCTCCGAAATACCGCCTCTTGACTTTAGAGCCACATGCGGAGCTAACTTCTGCAGCAGCAGTGCTTCACACGGTAACAGTAACCTCAAGCCACCTTCCACTGCGAAGATTAACTTGATAGCCGGCGTGTACCTCGCGTGCATGGCCATTGCTGTTCTTCTGGTTGCTGTAGGGGTCGACGCACTAACCAGGTACACATCAGGTCGTACTCCCGCAAGTCGCGGTAAGTCCGGTCTCCAACTCCTGGCGGTAACGCTGCGTCAGCTCAGGCACAAGTACCAGCTTCTGTTGCTGCCCGTCATAGGCTACATCGGCGCCGAACAAGCTTTCATGGCTGCGGACTTTACACAGGCTTACGTGGGCTGTGCCTACGGTATTAGTAACATTGGATTCGTGATGATCTGCTTCGGAGCTTGGAATGCAATAGCCGCGCCCTTAGCCGGAGCACTCGTCAAGACGACAGGCCGGTATCCGGTCATGGTCACTGCTCTGGTTTTAAATCTGTGTACCTTAACCGTACTGCTGCTCTGGAGACCGAACCCTGATCAGTGGCTGGTGTTCTACGGCCTCGCTGCCGTGTGGGGAGCCGCTGATGCTGTTTGGCTCGTGCAAGTTAACGCTCTATCCGGCATCCTATTTCCCGGTCACGAGGAAGCTGCCTATTCTAACTTCAGATTGTGGGAAGCGACCGGCAGTGTTCTGGCTTACGGCAGCGCTCCGTACCTTTGTGTTAGAACCAGATTGCAAATATTGCTCGGTCTATTAATAGTCGGCTTCACTGGCTACACGATCATTGAGCTAATGGAGTATAGAGTGAAGAGGGCGCACCACCCCGAGAGGAATTTCGAACTGGTCGATAAAAAAGAAGATCTGGGACCATTTTAA
Protein
MPEETITFSSNEKWRINRNVFVLGFAFMIHFTAFHGTANLQSSVNSDDGAGTFTLAAIYFSLILSNILLPAVVIKWLGCKWTVSMSFITYMPFIAAQFYPKLYTLIPAGMMVGFGGGPLWCAKCTYLSVISEPYSKLSGIPAEVLVVRFFGLFFMFYQMAQIWGNLISSAILSSSLGEAPFLNETIPSTAMTLITNASEIPPLDFRATCGANFCSSSASHGNSNLKPPSTAKINLIAGVYLACMAIAVLLVAVGVDALTRYTSGRTPASRGKSGLQLLAVTLRQLRHKYQLLLLPVIGYIGAEQAFMAADFTQAYVGCAYGISNIGFVMICFGAWNAIAAPLAGALVKTTGRYPVMVTALVLNLCTLTVLLLWRPNPDQWLVFYGLAAVWGAADAVWLVQVNALSGILFPGHEEAAYSNFRLWEATGSVLAYGSAPYLCVRTRLQILLGLLIVGFTGYTIIELMEYRVKRAHHPERNFELVDKKEDLGPF

Summary

EMBL
BABH01014093    NWSH01004487    PCG65051.1    ODYU01001025    SOQ36666.1    KQ459595    + More
KPI95670.1    RSAL01000041    RVE50921.1    AGBW02009298    OWR51126.1    KQ461154    KPJ08594.1    GFDF01011145    JAV02939.1    KK107695    EZA48042.1    KQ980765    KYN13376.1    KQ981744    KYN36192.1    GBYB01000688    GBYB01000689    GBYB01000690    JAG70455.1    JAG70456.1    JAG70457.1    BT128169    AEE63130.1    JTDY01000027    KOB79338.1    GEZM01010690    JAV93907.1    GEZM01010691    JAV93904.1    APGK01058995    APGK01058996    APGK01058997    APGK01058998    KB741292    ENN70372.1    KQ976641    KYM78798.1    ADTU01021539    KQ976749    KYN08786.1    KQ435105    KZC14684.1    KZ288230    PBC31651.1    GL451914    EFN78270.1    KQ982691    KYQ52224.1    KQ435855    KOX70659.1    KQ414661    KOC65552.1    NNAY01003515    OXU19293.1    GL888705    EGI58365.1    DS231856    EDS38486.1    GFDL01006106    JAV28939.1    JXUM01002850    KQ560146    KXJ84175.1    CH477292    EAT44533.1    ADMH02000327    ETN66941.1    KB632235    ERL90433.1    AXCN02001033    KK852890    KDR14271.1    APCN01003297    CH902619    EDV35674.1    KPU75780.1    NWSH01005059    PCG64473.1    ODYU01002414    SOQ39862.1    CM002911    KMY92252.1    KMY92253.1    AXCM01002861    KMY92254.1    CM000157    EDW89338.1    CH954177    EDV59529.2    NEVH01000606    PNF43431.1    AE013599    AY058326    AAF59099.4    AAL13555.1    ATLV01013334    KE524853    KFB37687.1    ACL83072.1    CH963849    EDW74227.1    GDHF01015996    JAI36318.1    CH916367    EDW00806.1    CH480816    EDW46928.1    AGBW02013359    OWR43531.1    GAMC01019594    JAB86961.1    GAKP01013697    JAC45255.1    GBXI01016298    GBXI01007032    GBXI01004348    JAC97993.1    JAD07260.1    JAD09944.1    OUUW01000001    SPP73705.1    PYGN01000167    PSN52296.1    CH933808    EDW10136.1    CH940648    EDW60839.1    JRES01000171    KNC33669.1    CM000071    KRT01637.1    KRT01636.1    AAAB01008986    EAA00363.3    CH479181    EDW31615.1    EAL24869.3    KPJ08593.1    CP012524    ALC40915.1    JXUM01049812    KQ561622    KXJ77978.1    JXUM01003156    KQ560154    KXJ84146.1    ADMH02000612    ETN65624.1    ATLV01015142    KE525003    KFB40120.1    KZ288296    PBC28930.1    KK852575    KDR21025.1    CH964291    EDW86510.1    QOIP01000009    RLU19038.1   
Pfam
PF05978   UNC-93        + More
PF07690   MFS_1
Interpro
IPR020846   MFS_dom        + More
IPR010291   Ion_channel_UNC-93       
IPR036259   MFS_trans_sf       
IPR011701   MFS       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
490
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
216.034
Exp number, first 60 AAs:
28.5398
Total prob of N-in:
0.99924
POSSIBLE N-term signal
sequence
inside
1  -  19
TMhelix
20  -  37
outside
38  -  51
TMhelix
52  -  74
inside
75  -  80
TMhelix
81  -  99
outside
100  -  108
TMhelix
109  -  131
inside
132  -  143
TMhelix
144  -  163
outside
164  -  232
TMhelix
233  -  255
inside
256  -  315
TMhelix
316  -  338
outside
339  -  352
TMhelix
353  -  373
inside
374  -  379
TMhelix
380  -  399
outside
400  -  443
TMhelix
444  -  461
inside
462  -  490
 
 

Population Genetic Test Statistics

Pi
31.520115
Theta
172.532468
Tajima's D
2.552705
CLR
0.930868
CSRT
0.949302534873256
Interpretation
Uncertain
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