SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04683  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003345
Annotation
PREDICTED:_UNC93-like_protein_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.975
 

Sequence

CDS
ATGGCGGAAGAAGTAAACAGTAAGAGAGAGGTTCAGGTGCACGGAACTGGAAGAATAGTGAAGAATGTTCTGGTGATAAGTTTGGCGTTTATGACGCAATTCACTGCGTACAGCGGTGCGGCGAATCTGCAGAGCTCGATAAACGCTAGTGCTGGCCTCGGAACCGCCGCACTGGCCGCCGTGTACGCGGGACTCATCCTCTCAAACATATTCCTGCCTGTATTTGTCATCAAGTGGCTCGGTACGAAGTGGACAATATCCTTCTCGTTTCTCACGTATATGCCGTATATAGCGGCGCAGCTGTATCCCCGATTCTACACCATGATCCCGGCGGGACTGCTCGTGGGTCTAGGCGGCGGACCTTTATGGTGTGCCAAATGCACTTATTTATACGTCATGTCTGAAGCTCATAGTGCGATTTCGAAGATAACAGCCGAAGCGTTGCTCGTACGCTTCTTAGGAATATTCTTTATGATATTTCATACGAGCCAAATTTGGGGTAACCTCATATCGTCTCTAGGAATTTATCTAGCTTGTATGGCTGGAGCTGCTATTATAGTTGCCGTTGGAGTGGATCCGATGAAAAAGTTTGATACGAGAGGCAGCGGCTCTGGTACGGGTCTGTCTGGGTTGGCATTGTTGGCCGCAACTCTAAAGCTGCTAATCGAACCGAATCAAATCTTAATGATTCCAATAAACGTCTTCTTAGGATTCCAACAAGCGTTTTTTGGGGCGGACTTTACTGCGGCCTTCGTGTCTTGTGCCGTCGGCACGGGGTCCGTTGGTTTTGTTATGATGACTTATGGATTGGCTGATGCAATAGGCTGTATCGTAAATGGATATATAGCAAAGATAATCGATCGTCTGCCTTTAATATGTATAGCTACTATAATAAACATTGCTATTTTGACGACGCTATTGACGTGGCATCCTAATGGTGGACAAGCCTATGTGCTCTACATCATAATTGTTGTTTTGGGATTCAGCGATTCGATCTGGATCGTCCAGATTAATGCGTACTATAGCATTTTGTTTCCTGGAAGAGAAGAGGCAGCTTTCTCAAACTTCAGGCTATGGGAGTCGGTCGGTTATATTGTAGCTTACGTGATCTCTCCATACCTCAGAACCAGCGTTAAGACCTACCTTATGTTATCATTACTAGTTTTAGGATTATCATGTTATTTCACTGTGGAATATCGAGAAAGAAGGAAAAAGTCGAAGTTGAATACGCCTGATAGGTACTGTTTGGAGTACAAGGCAAATATTTGTCTAGCATCTTTAGGCAAATTTGAGGGTCTTTGTCACTTAAAGTTCGTGATATAA
Protein
MAEEVNSKREVQVHGTGRIVKNVLVISLAFMTQFTAYSGAANLQSSINASAGLGTAALAAVYAGLILSNIFLPVFVIKWLGTKWTISFSFLTYMPYIAAQLYPRFYTMIPAGLLVGLGGGPLWCAKCTYLYVMSEAHSAISKITAEALLVRFLGIFFMIFHTSQIWGNLISSLGIYLACMAGAAIIVAVGVDPMKKFDTRGSGSGTGLSGLALLAATLKLLIEPNQILMIPINVFLGFQQAFFGADFTAAFVSCAVGTGSVGFVMMTYGLADAIGCIVNGYIAKIIDRLPLICIATIINIAILTTLLTWHPNGGQAYVLYIIIVVLGFSDSIWIVQINAYYSILFPGREEAAFSNFRLWESVGYIVAYVISPYLRTSVKTYLMLSLLVLGLSCYFTVEYRERRKKSKLNTPDRYCLEYKANICLASLGKFEGLCHLKFVI

Summary

EMBL
ODYU01002414    SOQ39862.1    NWSH01005059    PCG64473.1    AGBW02013359    OWR43531.1    + More
KQ459595    KPI95670.1    NWSH01005369    PCG64267.1    KK852890    KDR14271.1    KQ982691    KYQ52224.1    KQ976749    KYN08786.1    AGBW02013486    OWR43353.1    KQ980765    KYN13376.1    KQ981744    KYN36192.1    ADTU01021539    GL888705    EGI58365.1    PYGN01000431    PSN46516.1    GDQN01004664    GDQN01000987    JAT86390.1    JAT90067.1    KQ976641    KYM78798.1    NEVH01000606    PNF43431.1    KK852575    KDR21025.1    NNAY01003515    OXU19293.1    PYGN01000167    PSN52296.1    KZ288296    PBC28930.1    GECZ01011381    JAS58388.1    CVRI01000048    CRK98846.1    GAKP01011269    JAC47683.1    GAKP01011270    JAC47682.1    JXUM01003156    KQ560154    KXJ84146.1    JXUM01049812    KQ561622    KXJ77978.1    GBYB01008918    JAG78685.1    GL451914    EFN78270.1    KQ971324    KYB28531.1    GAMC01020698    GAMC01020695    JAB85860.1    ADTU01014275    ADTU01014276    ADTU01014277    ADTU01014278    GEZM01007503    GEZM01007501    JAV95142.1    KQ977279    KYN03977.1    GEDC01020618    JAS16680.1    GBXI01002962    JAD11330.1    GDHF01017512    JAI34802.1    KQ981410    KYN41916.1    GBXI01017509    JAC96782.1    GEDC01006499    JAS30799.1    GEDC01025529    JAS11769.1    GEZM01007502    JAV95141.1    APGK01019729    APGK01019730    KB740120    ENN81323.1    CH477291    EAT44590.1    GL762047    EFZ22329.1    GEBQ01007982    JAT31995.1    DS231855    EDS38186.1    GFDL01004994    JAV30051.1    AY665388    AAT76555.1    KQ414661    KOC65552.1    ABLF02027629    ABLF02027631    NEVH01011192    PNF32038.1    KQ435855    KOX70659.1    AAAB01008986    EAA00363.3    AJWK01010483    AXCM01002861    JRES01000171    KNC33669.1    KA645473    AFP60102.1    AJVK01001114    LJIJ01000037    ODN04684.1    CH916371    EDV92146.1    ATLV01015142    KE525003    KFB40120.1    AJWK01026073    IACF01006490    LAB72073.1    JXJN01016363    LJIJ01000695    ODM95223.1    CCAG010001429    CCAG010001430    CCAG010001431    CCAG010001432    CCAG010001433    JXJN01008344    JXJN01008345    CCAG010014002    CCAG010014003    QCYY01002711    ROT68180.1    AXCM01000181    HACA01021880    CDW39241.1   
Pfam
PF05978   UNC-93        + More
PF07690   MFS_1
Interpro
IPR010291   Ion_channel_UNC-93        + More
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR011701   MFS       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
440
Number of predicted TMHs:
12
Exp number of AAs in TMHs:
249.27189
Exp number, first 60 AAs:
27.4453
Total prob of N-in:
0.98958
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  57
TMhelix
58  -  80
inside
81  -  100
TMhelix
101  -  123
outside
124  -  137
TMhelix
138  -  160
inside
161  -  166
TMhelix
167  -  189
outside
190  -  203
TMhelix
204  -  222
inside
223  -  228
TMhelix
229  -  251
outside
252  -  260
TMhelix
261  -  283
inside
284  -  289
TMhelix
290  -  309
outside
310  -  318
TMhelix
319  -  341
inside
342  -  352
TMhelix
353  -  370
outside
371  -  379
TMhelix
380  -  397
inside
398  -  440
 
 

Population Genetic Test Statistics

Pi
386.465265
Theta
186.525271
Tajima's D
3.519161
CLR
0.38946
CSRT
0.994000299985001
Interpretation
Uncertain
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