Silkworm Genome Informatics Database

Gene

KWMTBOMO04682

Annotation

PREDICTED:_uncharacterized_protein_LOC106142350_[Amyelois_transitella]

Location

Bomo_Chr8(+):12084209-12087167 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.06

CDS

ATGGGCGGTAGCCGTTCAAGACGTGTGCTGGGGAGTAGATCCTATAAAAATTATTCGGCTCAAATGTTAGACACCGCAGTGGATCTGGTAAGCCGCAAAATTATTTCATCTTTAGAGGCATCAAAGCAATTTCTAATTCCCAGAAGAACAATAGACAATAAAGTGAAAAAGAAACACCCAAAAAAGCCAGGAGCTCAGCAACGACTTACTGCTGCCGAAGAACTAGACATAATAAAAGTACTCACCGCGGCAGCAGATTTTGGGTCACCTGTATCGAGATTGGAACTTAGGCTCATCGTCCGCACATACTTGAACAAAAATAATAAGGGGCATTTGTTTAAACACAACCTTCCTGGAAAGTGGTGGGTTAAAAATTTTTTGAACCGCCATAAAGAAATGCTAACAGAAAGAGCCGTGCAAAACATTAAAAGAGTTCGCGCTTCTACTAATACTGATGACTTTGAAAATTATTTTGAAAATTTACGTAAATCTCTTGATAAAATACCGGCTAAAAACATTTTAAATTATGATGAGACTAATCTCTCGGATAATCCTGGTTCAACGAAATGTATTTTTAAACGTAAAGTAAAATATCCGGAACGTATAATGAATACTTCCAAAGGAAATATTTCTATAATGTTTGCTGCGACGGCGGATGGTACTCTGTTACCTACATATACCGTTTATAAGGCTGAGCATTTATGGACAACGTGGTGTGAAAATGGGCCTGGCAAAGCGCGATATAACAGGAGTAAATCTGGTTGGTTCGACTCGACAGTTTTCCAAGACTGGTTTAATTCAGTTATCATACCATGGGCAGACAAACTGGATGGTCCAAAGTTGATTATAGGCGACAATCTTTCAAGCCACCTTAATATTGATATAGTCAGTAAATGTGAAGAACGGAACATAAGATTTACTTTTTTACCACCAAACTCAACTCATATATCCCAACCACTGGATGTGGCATTTTTTGGTCCCTTAAAAAGAAAATGGCGCGATATTTTGACCCAATATAAAATACATAATCCAGCAGAACCTCAAATTAACAAAGCCCACTTCCCCATGTTGTTAAAATCTCTATTAGAGGCTATAGAAATAAATAGTAAAGCAAATATCTGCGCTGGATTTAAGGCAACAGGCATAGTGCCTTTTAATCCCCAAACAATATTACGAAAGATACCCGATTATGAAGAGCAAAACAATTATACAATCGATACCGCGCTCTTAGATTATTTGAAAGCCAATCGTACAGCGAACCCTCTACAAAAATTAAGAAACAAAAAATTAAATATTACTCCAGGTAAGTCTATTTCCTCTCAAGAAGTTCAGTTATTCATGACGAAAAAGAAATCTAAGTTATCTAGAGAAACAAATCGAAGTAACATTAACGAAGCTCAACAAACTTTTCTTGATCTAGAAACGAATCTTGATGCAGAGCCAGTGATCGATGAGCCTAATTCAAAAACCCGACCAAAGGTTACTATTCTTTCAGAAGTCAGATTTAGTCCATATAATTGCGCCTATGCAGATTTGACAAAGATGCTTCCACAGAATCTTAAAAAGGTAGATAAAAGCTACAACATATTCAAATCTGAAAGTAAGGAGAATCTGCCCGTAATTCAACCTGAAGAAGAATTTTTAGAGTACATAGATTACGAAAACCAAATGCCATCAACGTCTGCAGATAATAAAAGGTTGATACTTAAAAAACCGGAGTCATGTAATGCAAAAAAGAAGATAAAGAGAGACAATAGTGACGACAATAGCGAAAATAGTGACAGTTATTCCTTAAGAGATACTTCTGAAGATGAATGTTTTATACCATCGGAATCAGAGTCATGTGAAGATTTTGAAGAACAAAATGTACAAAATACAGTGAAAAAATGTGAAACTCTTCGGATTGATAGTTACGTTTTAGTTAAATTTTGTGGGCCAAAAACCAACAAATACTATGTTGGAAAAGTATTGGATATTATTGATGATTCTGGTATGTATGTTAAATTTATGAGGAACAGAAAGGAAGAATTTTATTGGCCACATATCGATGACATTAGTTATACAGTAAAAAGTGACATCGAAATTATCCTAGGAATCCCTCACGAGGGTCGAAGAGGTACTTTAAGATTTGACTGTATCGACTTTTCAAAGTATAATGTTCAATAA

Protein

MGGSRSRRVLGSRSYKNYSAQMLDTAVDLVSRKIISSLEASKQFLIPRRTIDNKVKKKHPKKPGAQQRLTAAEELDIIKVLTAAADFGSPVSRLELRLIVRTYLNKNNKGHLFKHNLPGKWWVKNFLNRHKEMLTERAVQNIKRVRASTNTDDFENYFENLRKSLDKIPAKNILNYDETNLSDNPGSTKCIFKRKVKYPERIMNTSKGNISIMFAATADGTLLPTYTVYKAEHLWTTWCENGPGKARYNRSKSGWFDSTVFQDWFNSVIIPWADKLDGPKLIIGDNLSSHLNIDIVSKCEERNIRFTFLPPNSTHISQPLDVAFFGPLKRKWRDILTQYKIHNPAEPQINKAHFPMLLKSLLEAIEINSKANICAGFKATGIVPFNPQTILRKIPDYEEQNNYTIDTALLDYLKANRTANPLQKLRNKKLNITPGKSISSQEVQLFMTKKKSKLSRETNRSNINEAQQTFLDLETNLDAEPVIDEPNSKTRPKVTILSEVRFSPYNCAYADLTKMLPQNLKKVDKSYNIFKSESKENLPVIQPEEEFLEYIDYENQMPSTSADNKRLILKKPESCNAKKKIKRDNSDDNSENSDSYSLRDTSEDECFIPSESESCEDFEEQNVQNTVKKCETLRIDSYVLVKFCGPKTNKYYVGKVLDIIDDSGMYVKFMRNRKEEFYWPHIDDISYTVKSDIEIILGIPHEGRRGTLRFDCIDFSKYNVQ

Uniprot

NA

ProteinModelPortal

NA

KEGG

101742898 K10589 ubiquitin-protein ligase E3 C [EC:2.3.2.26] | (RefSeq) ubiquitin-protein ligase E3C

GO

GO:0003676 GO:0006139 GO:0003677 GO:0006357 GO:0032784 GO:0005089 GO:0035023 GO:0005515 GO:0016742 GO:0003824

Length:

721

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0427500000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00229

outside

1 - 721

Pi

153.038053

Theta

172.810423

Tajima's D

-1.0973

CLR

3.421575

CSRT

0.117494125293735

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree