Pre Gene Modal
BGIBMGA005287
Annotation
PREDICTED:_cold_shock_domain-containing_protein_CG9705_[Amyelois_transitella]
Full name
Cold shock domain-containing protein CG9705
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Conserved oligomeric Golgi complex subunit 6
Conserved oligomeric Golgi complex subunit 6
Alternative Name
Component of oligomeric Golgi complex 6
Transcription factor
Location in the cell
Cytoplasmic Reliability : 1.86 Nuclear Reliability : 1.854
Sequence
CDS
ATGTCCAACGATTACGGTTTTAATAGTGATGATTCCCCCAATAAAACAAACTCGCATTTGCAATTACCTAGTCCGATTATAACTCGGCGAAATCGAACAGCGTCGACATCAGAAAGGGCTTTAGGTAATCCATTGGAAACTGGTAAAATCAAGACGTTCTGCAGAGAGAAAGGTCACGGATTTGTGAAACCTGAAAAAGGGGGCGAAGATATATTTCTCCATATATCTGATATCGAAGGTGAATATGTACCCCTGCCTGGTGATGAAGTTATATATCGACTTTGCCCAATCCCACCTAAGTTCGAAAAATTTCAAGCTGTCCATGTGCGCATAATTCATCTCACTCCGGAGAAACACGTCAAGTGGGACGAACCACCTCTGTAA
Protein
MSNDYGFNSDDSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLETGKIKTFCREKGHGFVKPEKGGEDIFLHISDIEGEYVPLPGDEVIYRLCPIPPKFEKFQAVHVRIIHLTPEKHVKWDEPPL
Summary
Description
Required for normal Golgi function.
Subunit
Component of the conserved oligomeric Golgi complex.
Similarity
Belongs to the COG6 family.
Keywords
Complete proteome
Phosphoprotein
Reference proteome
Feature
chain Cold shock domain-containing protein CG9705
Uniprot
A0A2H1VBJ3
A0A194QTF2
I4DKY6
S4PTI9
A0A212EIM8
H9J6Z5
+ More
Q16WE8 A0A023EHF8 A0A1Q3EU87 A0A182PHL9 T1E2J0 Q7Q6W0 E0W0K3 A0A2M3ZK65 A0A2M4CSE7 B4HK65 B4QMY5 M9PFS8 Q9VVA0 B4ML69 A0A0K8V0P9 B4H4F1 Q29DT9 A0A1S3CXT5 A0A034W2Z2 A0A1S3CZ12 B3M4E1 A0A3B0K2K7 A0A1W4UUW8 A0A1B6MDX9 B4PKA0 B3NDH7 B4KXZ8 W8C822 A0A0A1X285 A0A1Y1LLR0 A0A0M4EMI5 B4LG56 A0A1A9W4Y8 A0A1L8DGA1 A0A0K8TKL2 A0A1L8DGC5 A0A1I8P7Z2 A0A2H8TEU0 T1PB57 A0A2R7X1U8 A0A1B6ENF6 A0A1L8EDG6 B4IXF9 A0A2J7R7H4 A0A224Y030 A0A0P4VWT4 A0A2S2PCL0 A0A2P8YH51 A0A2S2Q1I6 A0A1B6DF76 R4UWW1 A0A0N7Z8J9 A0A067RA16 A0A0L0C721 C4WTI2 T1JBT8 A0A1J1HQQ7 A0A0V0GDN8 V5IAC9 A0A1D2N1Q8 D7EJZ2 A0A0A9Z4Z8 A0A1B0CU27 A0A182LJ56 N6TYR4 A0A182XMX3 A0A182TTE6 A0A182JCU2 B0WNP0 A0A182HWS9 A0A2R5L054 A0A2T7PYM7 A0A2H8TM57 A0A226EU98 R7TZH2 A0A1I8I0C0 E9G2T2 Q6PHF1 A0A183S5F8 A0A1S3HBJ0 A0A2I4B8Z0 Q5XGN6 Q5DAJ0 A0A3B3TG41
Q16WE8 A0A023EHF8 A0A1Q3EU87 A0A182PHL9 T1E2J0 Q7Q6W0 E0W0K3 A0A2M3ZK65 A0A2M4CSE7 B4HK65 B4QMY5 M9PFS8 Q9VVA0 B4ML69 A0A0K8V0P9 B4H4F1 Q29DT9 A0A1S3CXT5 A0A034W2Z2 A0A1S3CZ12 B3M4E1 A0A3B0K2K7 A0A1W4UUW8 A0A1B6MDX9 B4PKA0 B3NDH7 B4KXZ8 W8C822 A0A0A1X285 A0A1Y1LLR0 A0A0M4EMI5 B4LG56 A0A1A9W4Y8 A0A1L8DGA1 A0A0K8TKL2 A0A1L8DGC5 A0A1I8P7Z2 A0A2H8TEU0 T1PB57 A0A2R7X1U8 A0A1B6ENF6 A0A1L8EDG6 B4IXF9 A0A2J7R7H4 A0A224Y030 A0A0P4VWT4 A0A2S2PCL0 A0A2P8YH51 A0A2S2Q1I6 A0A1B6DF76 R4UWW1 A0A0N7Z8J9 A0A067RA16 A0A0L0C721 C4WTI2 T1JBT8 A0A1J1HQQ7 A0A0V0GDN8 V5IAC9 A0A1D2N1Q8 D7EJZ2 A0A0A9Z4Z8 A0A1B0CU27 A0A182LJ56 N6TYR4 A0A182XMX3 A0A182TTE6 A0A182JCU2 B0WNP0 A0A182HWS9 A0A2R5L054 A0A2T7PYM7 A0A2H8TM57 A0A226EU98 R7TZH2 A0A1I8I0C0 E9G2T2 Q6PHF1 A0A183S5F8 A0A1S3HBJ0 A0A2I4B8Z0 Q5XGN6 Q5DAJ0 A0A3B3TG41
Pubmed
26354079
22651552
23622113
22118469
19121390
17510324
+ More
24945155 24330624 12364791 14747013 17210077 20566863 17994087 22936249 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 12537569 17372656 18327897 15632085 23185243 25348373 18057021 17550304 24495485 25830018 28004739 26369729 25315136 29403074 27129103 24845553 26108605 27289101 18362917 19820115 25401762 26823975 23537049 23254933 26392545 21292972 23594743 16617374 29240929
24945155 24330624 12364791 14747013 17210077 20566863 17994087 22936249 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 12537569 17372656 18327897 15632085 23185243 25348373 18057021 17550304 24495485 25830018 28004739 26369729 25315136 29403074 27129103 24845553 26108605 27289101 18362917 19820115 25401762 26823975 23537049 23254933 26392545 21292972 23594743 16617374 29240929
EMBL
ODYU01001666
SOQ38208.1
KQ461154
KPJ08589.1
AK401954
KQ459595
+ More
BAM18576.1 KPI95665.1 GAIX01011958 JAA80602.1 AGBW02014614 OWR41334.1 BABH01014073 BABH01014074 CH477568 EAT38914.1 GAPW01005278 JAC08320.1 GFDL01016229 JAV18816.1 GALA01000669 JAA94183.1 AAAB01008960 EAA11357.4 DS235860 EEB19159.1 GGFM01008087 MBW28838.1 GGFL01004094 MBW68272.1 CH480815 EDW41806.1 CM000363 CM002912 EDX10777.1 KMZ00106.1 AE014296 KX531695 AGB94665.1 ANY27505.1 AY060441 CH963847 EDW73127.1 GDHF01025544 GDHF01019830 JAI26770.1 JAI32484.1 CH479208 EDW31266.1 CH379070 EAL30325.1 KRT08827.1 KRT08828.1 GAKP01010814 GAKP01010813 GAKP01010812 JAC48138.1 CH902618 EDV40435.1 KPU78574.1 OUUW01000012 SPP87553.1 GEBQ01005839 JAT34138.1 CM000159 EDW94798.1 KRK02065.1 CH954178 EDV52039.1 KQS44087.1 CH933809 EDW18700.1 KRG06321.1 KRG06322.1 GAMC01003264 JAC03292.1 GBXI01009524 JAD04768.1 GEZM01054053 JAV73871.1 CP012525 ALC44910.1 CH940647 EDW69364.1 GFDF01008602 JAV05482.1 GDAI01002754 JAI14849.1 GFDF01008603 JAV05481.1 GFXV01000808 MBW12613.1 KA645929 AFP60558.1 KK856272 PTY25350.1 GECZ01030317 GECZ01005533 JAS39452.1 JAS64236.1 GFDG01002031 JAV16768.1 CH916366 EDV96396.1 NEVH01006732 PNF36781.1 GFTR01002166 JAW14260.1 GDRN01108151 JAI57307.1 GGMR01014505 MBY27124.1 PYGN01000599 PSN43571.1 GGMS01001809 MBY71012.1 GEDC01016910 GEDC01012947 JAS20388.1 JAS24351.1 KC740972 AGM32796.1 GDKW01003139 JAI53456.1 KK852824 KDR15429.1 JRES01000810 KNC28203.1 ABLF02019580 AK340624 BAH71202.1 JH432019 CVRI01000018 CRK90400.1 GECL01000096 JAP06028.1 GALX01001405 JAB67061.1 LJIJ01000295 ODM99170.1 DS497723 EFA12910.1 GBHO01005196 GBHO01005194 GBRD01016957 GDHC01019983 JAG38408.1 JAG38410.1 JAG48870.1 JAP98645.1 AJWK01028342 AJWK01028343 AJWK01028344 APGK01055664 KB741269 KB632330 ENN71427.1 ERL92601.1 DS232013 EDS31876.1 APCN01001535 IACF01007510 LAB73093.1 PZQS01000001 PVD38508.1 GFXV01003439 MBW15244.1 LNIX01000002 OXA60727.1 AMQN01011415 KB308870 ELT96305.1 NIVC01000741 PAA77428.1 GL732530 EFX86454.1 BX936335 CU464204 BC056576 AAH56576.1 BC084399 AAH84399.1 AY815434 FN320008 FN320009 FN320010 FN320011 FN320012 AAW27166.1 CAX75734.1
BAM18576.1 KPI95665.1 GAIX01011958 JAA80602.1 AGBW02014614 OWR41334.1 BABH01014073 BABH01014074 CH477568 EAT38914.1 GAPW01005278 JAC08320.1 GFDL01016229 JAV18816.1 GALA01000669 JAA94183.1 AAAB01008960 EAA11357.4 DS235860 EEB19159.1 GGFM01008087 MBW28838.1 GGFL01004094 MBW68272.1 CH480815 EDW41806.1 CM000363 CM002912 EDX10777.1 KMZ00106.1 AE014296 KX531695 AGB94665.1 ANY27505.1 AY060441 CH963847 EDW73127.1 GDHF01025544 GDHF01019830 JAI26770.1 JAI32484.1 CH479208 EDW31266.1 CH379070 EAL30325.1 KRT08827.1 KRT08828.1 GAKP01010814 GAKP01010813 GAKP01010812 JAC48138.1 CH902618 EDV40435.1 KPU78574.1 OUUW01000012 SPP87553.1 GEBQ01005839 JAT34138.1 CM000159 EDW94798.1 KRK02065.1 CH954178 EDV52039.1 KQS44087.1 CH933809 EDW18700.1 KRG06321.1 KRG06322.1 GAMC01003264 JAC03292.1 GBXI01009524 JAD04768.1 GEZM01054053 JAV73871.1 CP012525 ALC44910.1 CH940647 EDW69364.1 GFDF01008602 JAV05482.1 GDAI01002754 JAI14849.1 GFDF01008603 JAV05481.1 GFXV01000808 MBW12613.1 KA645929 AFP60558.1 KK856272 PTY25350.1 GECZ01030317 GECZ01005533 JAS39452.1 JAS64236.1 GFDG01002031 JAV16768.1 CH916366 EDV96396.1 NEVH01006732 PNF36781.1 GFTR01002166 JAW14260.1 GDRN01108151 JAI57307.1 GGMR01014505 MBY27124.1 PYGN01000599 PSN43571.1 GGMS01001809 MBY71012.1 GEDC01016910 GEDC01012947 JAS20388.1 JAS24351.1 KC740972 AGM32796.1 GDKW01003139 JAI53456.1 KK852824 KDR15429.1 JRES01000810 KNC28203.1 ABLF02019580 AK340624 BAH71202.1 JH432019 CVRI01000018 CRK90400.1 GECL01000096 JAP06028.1 GALX01001405 JAB67061.1 LJIJ01000295 ODM99170.1 DS497723 EFA12910.1 GBHO01005196 GBHO01005194 GBRD01016957 GDHC01019983 JAG38408.1 JAG38410.1 JAG48870.1 JAP98645.1 AJWK01028342 AJWK01028343 AJWK01028344 APGK01055664 KB741269 KB632330 ENN71427.1 ERL92601.1 DS232013 EDS31876.1 APCN01001535 IACF01007510 LAB73093.1 PZQS01000001 PVD38508.1 GFXV01003439 MBW15244.1 LNIX01000002 OXA60727.1 AMQN01011415 KB308870 ELT96305.1 NIVC01000741 PAA77428.1 GL732530 EFX86454.1 BX936335 CU464204 BC056576 AAH56576.1 BC084399 AAH84399.1 AY815434 FN320008 FN320009 FN320010 FN320011 FN320012 AAW27166.1 CAX75734.1
Proteomes
UP000053240
UP000053268
UP000007151
UP000005204
UP000008820
UP000075885
+ More
UP000007062 UP000009046 UP000001292 UP000000304 UP000000803 UP000007798 UP000008744 UP000001819 UP000079169 UP000007801 UP000268350 UP000192221 UP000002282 UP000008711 UP000009192 UP000092553 UP000008792 UP000091820 UP000095300 UP000095301 UP000001070 UP000235965 UP000245037 UP000027135 UP000037069 UP000007819 UP000183832 UP000094527 UP000007266 UP000092461 UP000019118 UP000030742 UP000076407 UP000075902 UP000075880 UP000002320 UP000075840 UP000245119 UP000198287 UP000014760 UP000095280 UP000215902 UP000000305 UP000000437 UP000050792 UP000085678 UP000192220 UP000261540
UP000007062 UP000009046 UP000001292 UP000000304 UP000000803 UP000007798 UP000008744 UP000001819 UP000079169 UP000007801 UP000268350 UP000192221 UP000002282 UP000008711 UP000009192 UP000092553 UP000008792 UP000091820 UP000095300 UP000095301 UP000001070 UP000235965 UP000245037 UP000027135 UP000037069 UP000007819 UP000183832 UP000094527 UP000007266 UP000092461 UP000019118 UP000030742 UP000076407 UP000075902 UP000075880 UP000002320 UP000075840 UP000245119 UP000198287 UP000014760 UP000095280 UP000215902 UP000000305 UP000000437 UP000050792 UP000085678 UP000192220 UP000261540
Interpro
IPR002059
CSP_DNA-bd
+ More
IPR011129 CSD
IPR012340 NA-bd_OB-fold
IPR008977 PHM/PNGase_F_dom_sf
IPR024548 Cu2_monoox_C
IPR028460 Tbh/DBH
IPR000323 Cu2_ascorb_mOase_N
IPR020611 Cu2_ascorb_mOase_CS-1
IPR014784 Cu2_ascorb_mOase-like_C
IPR005018 DOMON_domain
IPR036939 Cu2_ascorb_mOase_N_sf
IPR019844 CSD_1
IPR012156 Cold_shock_CspA
IPR010490 COG6
IPR003029 S1_domain
IPR011129 CSD
IPR012340 NA-bd_OB-fold
IPR008977 PHM/PNGase_F_dom_sf
IPR024548 Cu2_monoox_C
IPR028460 Tbh/DBH
IPR000323 Cu2_ascorb_mOase_N
IPR020611 Cu2_ascorb_mOase_CS-1
IPR014784 Cu2_ascorb_mOase-like_C
IPR005018 DOMON_domain
IPR036939 Cu2_ascorb_mOase_N_sf
IPR019844 CSD_1
IPR012156 Cold_shock_CspA
IPR010490 COG6
IPR003029 S1_domain
Gene 3D
CDD
ProteinModelPortal
A0A2H1VBJ3
A0A194QTF2
I4DKY6
S4PTI9
A0A212EIM8
H9J6Z5
+ More
Q16WE8 A0A023EHF8 A0A1Q3EU87 A0A182PHL9 T1E2J0 Q7Q6W0 E0W0K3 A0A2M3ZK65 A0A2M4CSE7 B4HK65 B4QMY5 M9PFS8 Q9VVA0 B4ML69 A0A0K8V0P9 B4H4F1 Q29DT9 A0A1S3CXT5 A0A034W2Z2 A0A1S3CZ12 B3M4E1 A0A3B0K2K7 A0A1W4UUW8 A0A1B6MDX9 B4PKA0 B3NDH7 B4KXZ8 W8C822 A0A0A1X285 A0A1Y1LLR0 A0A0M4EMI5 B4LG56 A0A1A9W4Y8 A0A1L8DGA1 A0A0K8TKL2 A0A1L8DGC5 A0A1I8P7Z2 A0A2H8TEU0 T1PB57 A0A2R7X1U8 A0A1B6ENF6 A0A1L8EDG6 B4IXF9 A0A2J7R7H4 A0A224Y030 A0A0P4VWT4 A0A2S2PCL0 A0A2P8YH51 A0A2S2Q1I6 A0A1B6DF76 R4UWW1 A0A0N7Z8J9 A0A067RA16 A0A0L0C721 C4WTI2 T1JBT8 A0A1J1HQQ7 A0A0V0GDN8 V5IAC9 A0A1D2N1Q8 D7EJZ2 A0A0A9Z4Z8 A0A1B0CU27 A0A182LJ56 N6TYR4 A0A182XMX3 A0A182TTE6 A0A182JCU2 B0WNP0 A0A182HWS9 A0A2R5L054 A0A2T7PYM7 A0A2H8TM57 A0A226EU98 R7TZH2 A0A1I8I0C0 E9G2T2 Q6PHF1 A0A183S5F8 A0A1S3HBJ0 A0A2I4B8Z0 Q5XGN6 Q5DAJ0 A0A3B3TG41
Q16WE8 A0A023EHF8 A0A1Q3EU87 A0A182PHL9 T1E2J0 Q7Q6W0 E0W0K3 A0A2M3ZK65 A0A2M4CSE7 B4HK65 B4QMY5 M9PFS8 Q9VVA0 B4ML69 A0A0K8V0P9 B4H4F1 Q29DT9 A0A1S3CXT5 A0A034W2Z2 A0A1S3CZ12 B3M4E1 A0A3B0K2K7 A0A1W4UUW8 A0A1B6MDX9 B4PKA0 B3NDH7 B4KXZ8 W8C822 A0A0A1X285 A0A1Y1LLR0 A0A0M4EMI5 B4LG56 A0A1A9W4Y8 A0A1L8DGA1 A0A0K8TKL2 A0A1L8DGC5 A0A1I8P7Z2 A0A2H8TEU0 T1PB57 A0A2R7X1U8 A0A1B6ENF6 A0A1L8EDG6 B4IXF9 A0A2J7R7H4 A0A224Y030 A0A0P4VWT4 A0A2S2PCL0 A0A2P8YH51 A0A2S2Q1I6 A0A1B6DF76 R4UWW1 A0A0N7Z8J9 A0A067RA16 A0A0L0C721 C4WTI2 T1JBT8 A0A1J1HQQ7 A0A0V0GDN8 V5IAC9 A0A1D2N1Q8 D7EJZ2 A0A0A9Z4Z8 A0A1B0CU27 A0A182LJ56 N6TYR4 A0A182XMX3 A0A182TTE6 A0A182JCU2 B0WNP0 A0A182HWS9 A0A2R5L054 A0A2T7PYM7 A0A2H8TM57 A0A226EU98 R7TZH2 A0A1I8I0C0 E9G2T2 Q6PHF1 A0A183S5F8 A0A1S3HBJ0 A0A2I4B8Z0 Q5XGN6 Q5DAJ0 A0A3B3TG41
PDB
3AQQ
E-value=1.97179e-28,
Score=306
Ontologies
GO
PANTHER
Topology
Subcellular location
Golgi apparatus membrane
Length:
127
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.17211
outside
1 - 127
Population Genetic Test Statistics
Pi
225.232551
Theta
179.270472
Tajima's D
0.555727
CLR
0
CSRT
0.529973501324934
Interpretation
Uncertain
