Silkworm Genome Informatics Database

Gene

KWMTBOMO04676 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005521

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]

Location

Bomo_Chr8(+):11954019-11998761 View in EpiBrowser

Location in the cell

Cytoskeletal Reliability : 1.419 Nuclear Reliability : 1.463

CDS

ATGGCGAATCCGAACGATAAACGCTTCTTCCAGCTGACACTAGCCATTCAGAAGGCGATCAACACCAACGAGACACCGGTCAAAGAGAAACATGTCCGAAGCACGATCATCGGTACATTCAGGGAACAAAGCGCCATCACCTATTGGATGGTCGCCGTCCGACTTCCGATCCAGGATAATCGGATCGTGGCTTGGAAGTTCTGTCACGTGACCCATAAACTGCTGCGCGAGGGTCACCCGGCGTGCCTTGACGATTCGCAGAGGCACATCTCCATGATCGAAAACCTCGGCAAGCTCTGGGTGCATCTTCGTGAAGGCTACGGCAAGCTGGTGCATCTGTACTGCAACTTGCTGGTATGCAAATTGAAGTTCCACGCGAGAAATCCTCGTTTCCCAGGGAACATGCAGCTTACGGCCGACGAACTGGACGCGATCGCTGAGAACGACGTCAACAACTATTTCCAGTTATGCGTAGAGTTGTTCGACTACATGGACGAAATTCTAAATTTACAAGCAGCAGTGTTCGACAGCCTGGGCAACGCTCGGGCCAACTCGATGACGGCGAGCGGCCAGTGCCGGCTGGCGGCGCTCATCCCGTGCGCGCAGGACGCGTCGCAGCTGTACGACTGCAACGTGCGCCTGCTGTTCCGGCTGCACGCCGCGCTGCCCGCCGACACGCTGCTCGGACACCGCGAGAGATTCAGACAGCAGTTCAAGAAACTGAGCACGTTCTACAAGCACGCGAGTAGTCTCCAGTATTACAGGAATTTGCTGACTCTGCCGGTGTTGCCATCTAATCCACCTAATTTTCTACTCCAGAGCGAGTTCGGCACGTACGTGACGCCGGTGGTGTCGGTGCCGGAGCCGCCGCCGGACGAGCCGGACGCGGTCGGCGCGCTCGTCGACACGTCCGACGCACTCAGCCAGTCCACATCGGATCAGTTCGAGGAGTTTGAGAGTCGTCCGTCGGCGTCCCCGCAGCCCGACCCCGTCGTGGAGCGGGACCGGCTCATCGACCATCTGCAGAACGAACTTAAAAGGATGAGGACCGAAGTATCACAATTGGTGCAAGAAAGGAATTCAATGCTCGGCTCGATGAGGGAGCATTGTATACGTTTAGAAACTCAACTGCAGACCGCTAAAGCTGAGTTGGAAGATGAGAAACAGAGGGCCGTGGCTTTGTCTGCTGAGACCCCAGAAATTAAACAGAAACTGGTTCAAACAGAGGAGATGGCTAAAACGATCGACGAAAAGTTCCAGAAACTTAAAGGGGCGTACACACAACTACGGGAAGAACACATCGTTCTGATTAGAAAAAAAGCCGAGGTAGACAAAATGGCCGCCAATTTACGCGCCACAGCCGCTCAGCATGAAACCGCCAAAATGTCGTTACAGCAACAACTCAACGACAGAATGAAAGATGTTGAATTACTACAACAAAGTGCTTCGTCGAGTGAAGAGATTGAAGTGTACAAATCAGAAATAGCAAACCTTCGTAGCGAATTAGAACAATCTAGAGAAAAAGAGAATGAATTCCAAATCTTAAAAGCTTCCATGGAAGCTCTAGAGATTGAACATAAAACTGTTAAAACTGAACAAGAAGACAAAATCCTGACGATATCGAATGAACTCAAAGAATCTAAAGAAATTTTAGAAAAAGTAATGCAAGAAAAAATTGATAAAGATACTGAATTAATTAGAGTTAAAGAAGAATTGTTAGGATTGAGAGAAAAGAGTGGAGATGAGTATAAAAAGGTAGTTGAAGAAAAAGAGGAAGCTCTTAAAAAAATCATCGAACTATCAGAAACTCATGCAAAGGAAAAAGAGGAATTAATTTTTTCGAACGCTGAATTTGTTAATCAATTACAAATGGATTTGGATAAATTGAAACAAAATTTAGCGGATGTTGAATCGAATTATTCTTTAAAATTTGAAATCCTTAATGAAGAAATGGTGAAAAAGAATTCAGAGTTTGAAAAAATTCTCAACGAGAAAGATTGTGATTTAAAAGAAGCTCTACAAAAACTTGAAGCGATAGAGAATGATTATGAAACCGTTAAAAAAATTTACAAAGAACAAGAACAAGAGAAGCAGGAACAAATAAATAAATTGTCTTTGGAAATAGAGAATTGCAAAAGAAATAATGAAATCGTTCAAGAAGTAAATAATGAGAAATTAGAACTTGCTAATCGGATATCGGATTTAGAATGTTTAGGTGAAAAAAATAACAATAAAATTGGAGAATTAAACGAAATAATACAAGAACAAAAGGAGCTAGTAGAAAGGGAGAAACAGCAGAATGAATCACTGTCGATAAGAATCAAAGAACTTGAATCAGAAAGAGAGGAACACAGTAAGAATATTGATGAATTAAATGAACAACTAAAAGATGCCTTAAGTCGGTCAGAAAAATTGAAGTTCGATTATGAAGATCAATTGAAAAGTACTAATTACAATGTAACGTTATTAAATGATAAACTTCAGAACGTAACTGGTTGCAAAGACGATTTGATAGATAGCTTGAAAAGCATGATTACCGAAAAAGATAAACAGGTTATAAACTTAAATTGTGAAGTAACCAAACTAACAGAAAATGTCACCAGACTAACTGAAGAACTAACCGAAACTCATGCTGAATTGGAGATAGGCAAGAACGAATTCTTTACTTTAAGAGAAGAATTCGAAAATATCATGGATCGCAATGAAAAAGATTTGGCCTTAAAAGATCAAGAGCTTGCCAACCTCCGGGATGAGATCAACAAAATAACCAAAAAGACGGACAAACTTGAAAAAGAAAAAGTTGATTTACTTTCCGAATTGGATTTAGAGCGACAGACGTTTGAAAATAAAATAAAAGAACTTCATCTCGATAACCAAAGACTGCAAGCTGACTACGAAGCCATAGAGTCTGAAAAACAAAAGCTAAGCCATGAATTGACGTCACAGATTGAAAAGATCAATTCAGATTACGAAATGTTAATGAACACAAATACAAATGATAAGGTTGAATACACCGAACGTATTAGTGATTTACAATTATCAAATTCGTCAAAAGATGAAATCATTAATACATGCAAAGTTGACATTGAAAATTTGAAAGCGGAAATCGAAGAATTGAAACAAAATAATTTAAAAGAAAAGGACGATATCGAAGCGGTTCTGACTGAAAGAAATAAACAGAAACAGTTGTCGGAGGCTAGAATAGAGCACGTCGAACACATGCGACTGAACGCAGAGTGTGAATTACAGGATTTGTTACAAAACAATTCCGTACTAGAAGCGGACGTGGCGGCTTTGAAGCGGCAACTCGACGAGGCGCAAAGGGAACTAGAGAAACAGCGTCTCGAAGCGGTGACGTGTGTCGGGGAGGCCGCTTTGGCGCTGACGAACGAAGCGTTAGCGGCCCTCGAGCGGTCCGACGCGCAGGAGTCGACCCTGCTCGCCTCGCAACTGGCCGTCGAAGCTTTCGAACAACTCGACAAATGTTCCGAGATCAAGGGCAATGAGGAAGCTGTAATGAAATCCGCAATAAACGTGGCCCACAACACCGCGCAGCTCGTTGGCTACGTCACAGAGGCTTCCCATGTTTCCACCAGCTTGGAATTGACGGATAAACTACAGAACGAATGCCGCGCCATGCTGAGCTCGACGAGGGAGTGCCTGGAGGCGGTGCGGGGCGGGCGCGCGGCGGGCACGCGCTGCGGGGAGGCGCGCGCCCGCGTGCTCGGCGCCGCGCACGCCGCCGCCGCCGCACTGCGACCCGACGGCGCCGCGCGGACCGTCGACGACGAGCTCGACGACATGGACGCCGCCATAGAGCACGCCGCCTCGCAGATAGAGGAAATGTTAGCGGCCAGTAGAGCTGGCGACTCCGGGGTGAAGTTAGAAGTCAACGGTAAGATCCTGGACGCTTGCACCACCCTGATGGCCGCGGTGAAGGTTCTCGTCCAAGACGCCAGACAGCTGCAAAACGAACTCGGCGATCAGCACTCCCGGCAGAAGATGTACCGGAAGAACCCGCAGTGGTCCGAAGGATTGATATCCGCGGCGAAGGCCGTAGTCTTCGCTGCCAAGCTACTCGTATCGTCAGCGGACGAGGCGGTGGGCGGCAGCGGGCGCATGGAGGGCGTGTCGGCGGCGGCGCACGAGGTGGCGGGCAGCACCGCGCAGCTCGTGGCGGCCTCCCGCGCGCGCGCCCCCCCGCAGACCCCCGCCCTCACCCGCCTCACGCAGGCGTCGCGCGGGGTCGCCGCCGCCACCGGCGCGCTGGTGGGCGCCGTGCGGGCCGCCTCCGCGCGACTCAACGAACAGGAAGCTCTAGACACGTCGGCACTAACGCTGACGGCGACGCGTATCCTGGAGATGGAGAGCAAGGTGCGGTCGCTGGAGCTGGAGAGCGCGCTGGACGCGGAGCGGGCTCGCCTCGCCGCGCTGCGGAAGCGACACTACCTGCTCGCGCAACAAGAAGAGAATGGAAGCATAACCAACGGGAAGGAGTGA

Protein

MANPNDKRFFQLTLAIQKAINTNETPVKEKHVRSTIIGTFREQSAITYWMVAVRLPIQDNRIVAWKFCHVTHKLLREGHPACLDDSQRHISMIENLGKLWVHLREGYGKLVHLYCNLLVCKLKFHARNPRFPGNMQLTADELDAIAENDVNNYFQLCVELFDYMDEILNLQAAVFDSLGNARANSMTASGQCRLAALIPCAQDASQLYDCNVRLLFRLHAALPADTLLGHRERFRQQFKKLSTFYKHASSLQYYRNLLTLPVLPSNPPNFLLQSEFGTYVTPVVSVPEPPPDEPDAVGALVDTSDALSQSTSDQFEEFESRPSASPQPDPVVERDRLIDHLQNELKRMRTEVSQLVQERNSMLGSMREHCIRLETQLQTAKAELEDEKQRAVALSAETPEIKQKLVQTEEMAKTIDEKFQKLKGAYTQLREEHIVLIRKKAEVDKMAANLRATAAQHETAKMSLQQQLNDRMKDVELLQQSASSSEEIEVYKSEIANLRSELEQSREKENEFQILKASMEALEIEHKTVKTEQEDKILTISNELKESKEILEKVMQEKIDKDTELIRVKEELLGLREKSGDEYKKVVEEKEEALKKIIELSETHAKEKEELIFSNAEFVNQLQMDLDKLKQNLADVESNYSLKFEILNEEMVKKNSEFEKILNEKDCDLKEALQKLEAIENDYETVKKIYKEQEQEKQEQINKLSLEIENCKRNNEIVQEVNNEKLELANRISDLECLGEKNNNKIGELNEIIQEQKELVEREKQQNESLSIRIKELESEREEHSKNIDELNEQLKDALSRSEKLKFDYEDQLKSTNYNVTLLNDKLQNVTGCKDDLIDSLKSMITEKDKQVINLNCEVTKLTENVTRLTEELTETHAELEIGKNEFFTLREEFENIMDRNEKDLALKDQELANLRDEINKITKKTDKLEKEKVDLLSELDLERQTFENKIKELHLDNQRLQADYEAIESEKQKLSHELTSQIEKINSDYEMLMNTNTNDKVEYTERISDLQLSNSSKDEIINTCKVDIENLKAEIEELKQNNLKEKDDIEAVLTERNKQKQLSEARIEHVEHMRLNAECELQDLLQNNSVLEADVAALKRQLDEAQRELEKQRLEAVTCVGEAALALTNEALAALERSDAQESTLLASQLAVEAFEQLDKCSEIKGNEEAVMKSAINVAHNTAQLVGYVTEASHVSTSLELTDKLQNECRAMLSSTRECLEAVRGGRAAGTRCGEARARVLGAAHAAAAALRPDGAARTVDDELDDMDAAIEHAASQIEEMLAASRAGDSGVKLEVNGKILDACTTLMAAVKVLVQDARQLQNELGDQHSRQKMYRKNPQWSEGLISAAKAVVFAAKLLVSSADEAVGGSGRMEGVSAAAHEVAGSTAQLVAASRARAPPQTPALTRLTQASRGVAAATGALVGAVRAASARLNEQEALDTSALTLTATRILEMESKVRSLELESALDAERARLAALRKRHYLLAQQEENGSITNGKE

Uniprot

H9J7M9 A0A2H1VBJ7 A0A1E1WFK9 A0A1E1WGX6 A0A1E1W068

Pubmed

19121390

EMBL

BABH01014065 BABH01014066 BABH01014067 BABH01014068 BABH01014069 BABH01014070 + More
BABH01014071 ODYU01001666 SOQ38209.1 GDQN01005306 GDQN01003604 JAT85748.1 JAT87450.1 GDQN01004804 GDQN01003640 JAT86250.1 JAT87414.1 GDQN01011603 GDQN01010679 GDQN01005597 GDQN01000444 JAT79451.1 JAT80375.1 JAT85457.1 JAT90610.1

Proteomes

UP000005204

PRIDE

H9J7M9

Pfam

PF07651 ANTH + More
PF01608 I_LWEQ

Interpro

IPR035964   I/LWEQ_dom_sf        + More
IPR030224   Sla2_fam
IPR008942   ENTH_VHS
IPR002558   ILWEQ_dom
IPR013809   ENTH
IPR011417   ANTH_dom

SUPFAM

SSF109885 SSF109885 + More
SSF48464 SSF48464

Gene 3D

1.25.40.90

ProteinModelPortal

H9J7M9 A0A2H1VBJ7 A0A1E1WFK9 A0A1E1WGX6 A0A1E1W068

PDB

5OO7 E-value=1.69909e-24, Score=285

KEGG

101741177 K04559 huntingtin interacting protein 1 | (RefSeq) huntingtin-interacting protein 1

GO

GO:0005543 GO:0030276 GO:0003779 GO:0006897 GO:0030131 GO:0005622 GO:0009058 GO:0005089 GO:0035023 GO:0005515 GO:0016742 GO:0003824

PANTHER

PTHR10407

Length:

1499

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02733

Exp number, first 60 AAs:

0.00409

Total prob of N-in:

0.00027

outside

1 - 1499

Pi

237.453105

Theta

181.862614

Tajima's D

0.535819

CLR

0.359049

CSRT

0.528173591320434

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics