SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04674  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005289
Annotation
mobility_group_protein_1B_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 3.911
 

Sequence

CDS
ATGACGGACAAGCCGAAGCGTCCTATGTCCGCATACATGCTGTGGTTAAACAGCGCGAGGGAACAGATAAAATCTGAAAATCCTGGCTTAAGAGTAACCGAAATAGCCAAAAAAGGCGGTGAAATTTGGAAATCAATGAAAGACAAAACTGAATGGGAACAGAAAGCTGCCAAGGCCAAGGAGCAATATGCAAAAGACCTAGAATCTTACAATGCCAATGGCGGTGGTGGCGAAGGGGGCGAAAAGAAGGCTCAAAAACGAGGGAAAAAGGGCAAGAAAACTGCTGCTGCTAAATCCAAGAAAAAGAAGGAAGAGTCTGAGGAAGAGGAAGGTGAGGAGGAGGAAGAAGAAAGTGAATGA
Protein
MTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDKTEWEQKAAKAKEQYAKDLESYNANGGGGEGGEKKAQKRGKKGKKTAAAKSKKKKEESEEEEGEEEEEESE

Summary

Uniprot
ProteinModelPortal
PDB
1E7J     E-value=2.18525e-15,     Score=194

Ontologies

GO

Topology

Length:
119
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.36431
outside
1  -  119
 
 

Population Genetic Test Statistics

Pi
36.578947
Theta
70.430463
Tajima's D
-1.118846
CLR
553.634513
CSRT
0.112144392780361
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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