Gene

KWMTBOMO04665

Annotation

PREDICTED:_ribonuclease_P_protein_subunit_p20_[Plutella_xylostella]

Location

Bomo_Chr8(+):11828389-11829454      View in EpiBrowser

Full name

Ribonuclease P protein subunit p20      

Location in the cell

Nuclear   Reliability : 3.161

CDS

ATGGCAGATGTGATGGCAGATCCTAACAGTCTACAGAAGAAAGAAGAAACGAAGAAAAAGCAAAAACGCTATCCTAATAAGAATTATGCTCTTAAAAAGCGTTTACCACCTAGGCCAGTAAATGGAGACAATGTGTTGTTTATTACGAAGAAGACGAACTTTAAAGCACAACTAGATAAATGTTGCGATTTACTAACAAGAGGAGAAAAGGAGATAATACTTCATGGTCTAGGCGCGGCAATACAGAGATGCTGTAATTTGGCACTTCAGCTGGAAATTCTATTTTCAGGCACCTGTCAAATCGAAGTAAACACTGGATCTGTAGACCTAGTTGATGATCTAGAGCCACTGACTGATGAACTAGATTTTGGCTCACAAATACGACATTCATCATCCATCCACATAAGAATATTTAGGACAGCAATGCTCGGATCTAATCAAAACTAG

Protein

MADVMADPNSLQKKEETKKKQKRYPNKNYALKKRLPPRPVNGDNVLFITKKTNFKAQLDKCCDLLTRGEKEIILHGLGAAIQRCCNLALQLEILFSGTCQIEVNTGSVDLVDDLEPLTDELDFGSQIRHSSSIHIRIFRTAMLGSNQN

Description

Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.

Catalytic Activity

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

Similarity

Belongs to the histone-like Alba family.

Uniprot

A0A2H1VEU6   A0A194PWY6   A0A194QST6   A0A3S2M433   A0A212ENB4   A0A0L7L7S4   + More
A0A2J7RR70   A0A067REH4   A0A2P8YL92   A0A1B6DTY7   A0A310SNB8   W4Z503   A0A0L7RDD3   A0A1L8DY29   A0A1L8DXM7   A0A1E1WW98   A0A0C9SAF5   G3MMV8   A0A154P9V6   G3MMV6   A0A1Y1L374   A0A224YY29  

EC Number

3.1.26.5

Pubmed

26354079    22118469    26227816    24845553    29403074    28503490    + More
26131772    22216098    28004739    28797301   

EMBL

ODYU01002156    SOQ39291.1    KQ459595    KPI95650.1    KQ461154    KPJ08578.1    + More
RSAL01000041    RVE50903.1    AGBW02013681    OWR42973.1    JTDY01002376    KOB71547.1    NEVH01000611    PNF43332.1    KK852521    KDR22132.1    PYGN01000515    PSN45008.1    GEDC01024065    GEDC01008156    JAS13233.1    JAS29142.1    KQ760869    OAD58751.1    AAGJ04104902    AAGJ04104903    KQ414614    KOC68843.1    GFDF01002919    JAV11165.1    GFDF01002920    JAV11164.1    GFAC01007888    JAT91300.1    GBZX01002623    JAG90117.1    JO843209    AEO34826.1    KQ434856    KZC08716.1    JO843207    AEO34824.1    GEZM01066159    JAV68122.1    GFPF01011361    MAA22507.1   

Proteomes

UP000053268    UP000053240    UP000283053    UP000007151    UP000037510    UP000235965    + More
UP000027135    UP000245037    UP000007110    UP000053825    UP000076502   

Pfam

PF12328   Rpp20        + More
PF01918   Alba

Interpro

IPR036882   Alba-like_dom_sf        + More
IPR014612   Pop7/Rpp20       
IPR002775   DNA/RNA-bd_Alba-like       
IPR020241   RNase_P/MRP_POP7       

SUPFAM

SSF82704   SSF82704       

Gene 3D

3.30.110.20    

ProteinModelPortal

A0A2H1VEU6   A0A194PWY6   A0A194QST6   A0A3S2M433   A0A212ENB4   A0A0L7L7S4   + More
A0A2J7RR70   A0A067REH4   A0A2P8YL92   A0A1B6DTY7   A0A310SNB8   W4Z503   A0A0L7RDD3   A0A1L8DY29   A0A1L8DXM7   A0A1E1WW98   A0A0C9SAF5   G3MMV8   A0A154P9V6   G3MMV6   A0A1Y1L374   A0A224YY29  

PDB

6CWX     E-value=5.90368e-17,     Score=208

KEGG

NA   

GO

GO:0003676   GO:0004526   GO:0008033   GO:0005730   GO:0005634   GO:0009058   GO:0005089   GO:0035023   GO:0005515   GO:0016742   GO:0003824  

PANTHER

PTHR15314  

Subcellular location

  

Length:

148

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0042

Exp number, first 60 AAs:

0

Total prob of N-in:

0.15821

outside

1  -  148

 

 

Pi

176.289237

Theta

172.754147

Tajima's D

-0.324463

CLR

0.638983

CSRT

0.285185740712964

Interpretation

Uncertain