Gene

KWMTBOMO04655

Pre Gene Modal

BGIBMGA005297

Annotation

PREDICTED:_beta-3_adrenergic_receptor-like_[Bombyx_mori]

Location

Bomo_Chr8(-):11608052-11611160      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.254

CDS

ATGATTTACGTCGCAGGTGGATGGGTAGCAACGGCAGCACTGCTGGCTCCATTGGCTGCCGCTCAGCCACCGTTAACCTATAGTTCTGGATTAGGAAGTTGCGCTCCAGACTGCGGGGCTGGGCCAGCAGGCCTCGGGTTTTGTCTTCTTTACGCATTGGTGACATTACTGATACCAGTTACTTTAGTGCTTATGTGCAGCTTGAAAATCCTTCGTATAGCGCGCTACCATCGACACAGGATCGCTGCGGCAATTTACGAAGTCACAATATCTGCGCAAGTGACGGTTACACATCAAAGGAATCCATTCTCACCTCCGCCACCACCACGTCACCGAGCATTATCCGCAGTGCTACAACCGCTCGGGTCACTGGCAATATTATATTTCCCTTATTATTGCATTTTAATATGGCCCGCTGTGTCTGCTCCGCCACAAATGCTGGCCGCACTATCGGCAACCCTACTGGCGGCTGCCCCTCCCGTTAACGGCATTTTGTACGGTATTCGAAGCAGAGCTCTCCGCGATTCTCTTCGAAATTACAGACGAAAGCGGATGACGAAAAGTGAAGTAACCCAAGAAATTCAGGCCCGAACCCCAAGTGCGTGTGGATCTCGAAGACCATCGCTATCAGCTGGCTCCGGCTGTATACGTCCACCGACAACAAGAAGGCTGTCTGATGCCGCGGCGATGGGATCTCGGGGTTCGGAGCGTCCGGCGCAACGTGCCGCTTCCTGTAACATGTTGCAAGATTCTCAAGAAGAAGAAATATCAAGACCTCGTACTTGTGCCATTCCGATAATTCGGGCGCCGCCGCACGTGGTGCTCGGTCGGGCTCTGGGCCTCGAAGAAGGTGGGACTAGAGACCGACGGAGACGTCAGTCGCCACGTATCACCGTCACTCGCGCTATGTCCGACGAGAGCGAGTCTCCCACTCGGCGTCCGCTGTGTCGGCAACAATCACGCTCCAGTGGCGCTCTTCTCGGTGGCTTAACATACTCTCCAGTCATCTCTGAAAACATGCAATCAGATCAATCGGCAGACGAGCAGCTCCTTCTCTCCTGGCCCAATAAAAACAACACGAAACAAGAGGCTTTATAA

Protein

MIYVAGGWVATAALLAPLAAAQPPLTYSSGLGSCAPDCGAGPAGLGFCLLYALVTLLIPVTLVLMCSLKILRIARYHRHRIAAAIYEVTISAQVTVTHQRNPFSPPPPPRHRALSAVLQPLGSLAILYFPYYCILIWPAVSAPPQMLAALSATLLAAAPPVNGILYGIRSRALRDSLRNYRRKRMTKSEVTQEIQARTPSACGSRRPSLSAGSGCIRPPTTRRLSDAAAMGSRGSERPAQRAASCNMLQDSQEEEISRPRTCAIPIIRAPPHVVLGRALGLEEGGTRDRRRRQSPRITVTRAMSDESESPTRRPLCRQQSRSSGALLGGLTYSPVISENMQSDQSADEQLLLSWPNKNNTKQEAL

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

H9J705   A0A2H1WLK2   A0A194PWY1   A0A194QTD2   A0A0L7KVK7   A0A3S2PGN6   + More
A0A212FDH5   D6WXU5   A0A1Y1NC97   A0A026X0Q0   A0A0L7QZ44   E2A4N1   A0A195C0C5   A0A151WG03   A0A195FXV3   A0A088AQ36   A0A151IVE1   F4X7W9   E2BFT5   A0A158NUF3   A0A195BSD9   A0A0M8ZUE3   A0A310SKW1   E9JAF7   K7JUD8   A0A1B0D504   T1I4K8   U4UHF4   N6U303   A0A182QE86   A7UUJ8   A0A182TPY8   A0A182HMQ3   A0A2P8ZCW8  

Pubmed

19121390    26354079    26227816    22118469    18362917    19820115    + More
28004739    24508170    30249741    20798317    21719571    21347285    21282665    20075255    23537049    12364791    29403074   

EMBL

BABH01014030    ODYU01009482    SOQ53955.1    KQ459595    KPI95645.1    KQ461154    + More
KPJ08569.1    JTDY01005160    KOB67307.1    RSAL01000041    RVE50896.1    AGBW02009036    OWR51809.1    KQ971362    EFA09261.2    GEZM01010750    JAV93856.1    KK107039    QOIP01000006    EZA61885.1    RLU21213.1    KQ414685    KOC63853.1    GL436710    EFN71633.1    KQ978501    KYM93598.1    KQ983203    KYQ46761.1    KQ981193    KYN45137.1    KQ980900    KYN11704.1    GL888900    EGI57455.1    GL448039    EFN85473.1    ADTU01026413    KQ976417    KYM89947.1    KQ435840    KOX71345.1    KQ760221    OAD61361.1    GL770322    EFZ10190.1    AJVK01025019    ACPB03014987    ACPB03014988    ACPB03014989    ACPB03014990    KB632356    ERL93404.1    APGK01041540    KB740994    ENN75950.1    AXCN02002173    AAAB01008963    EDO63626.2    APCN01004856    PYGN01000099    PSN54346.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000037510    UP000283053    UP000007151    + More
UP000007266    UP000053097    UP000279307    UP000053825    UP000000311    UP000078542    UP000075809    UP000078541    UP000005203    UP000078492    UP000007755    UP000008237    UP000005205    UP000078540    UP000053105    UP000002358    UP000092462    UP000015103    UP000030742    UP000019118    UP000075886    UP000007062    UP000075902    UP000075840    UP000245037   

PRIDE

H9J705   

Pfam

PF00001   7tm_1

Interpro

IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn       

ProteinModelPortal

H9J705   A0A2H1WLK2   A0A194PWY1   A0A194QTD2   A0A0L7KVK7   A0A3S2PGN6   + More
A0A212FDH5   D6WXU5   A0A1Y1NC97   A0A026X0Q0   A0A0L7QZ44   E2A4N1   A0A195C0C5   A0A151WG03   A0A195FXV3   A0A088AQ36   A0A151IVE1   F4X7W9   E2BFT5   A0A158NUF3   A0A195BSD9   A0A0M8ZUE3   A0A310SKW1   E9JAF7   K7JUD8   A0A1B0D504   T1I4K8   U4UHF4   N6U303   A0A182QE86   A7UUJ8   A0A182TPY8   A0A182HMQ3   A0A2P8ZCW8  

KEGG

101737969    no KO assigned | (RefSeq) beta-3 adrenergic receptor-like

GO

GO:0008502   GO:0016021   GO:0005887   GO:0007602   GO:0007186   GO:0008020   GO:0071482   GO:0004930   GO:0006749   GO:0005751   GO:0006914   GO:0009058   GO:0005089   GO:0035023   GO:0005515   GO:0016742   GO:0003824  

SignalP

Position:   1 - 21,         Likelihood:  0.596505

 

 

Length:

365

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

87.2576800000001

Exp number, first 60 AAs:

34.03074

Total prob of N-in:

0.96358

POSSIBLE N-term signal

sequence

inside

1  -  1

TMhelix

2  -  21

outside

22  -  48

TMhelix

49  -  71

inside

72  -  119

TMhelix

120  -  142

outside

143  -  145

TMhelix

146  -  168

inside

169  -  365

 

 

Pi

248.994999

Theta

207.204917

Tajima's D

0.610062

CLR

0.176107

CSRT

0.548922553872306

Interpretation

Uncertain