Gene

KWMTBOMO04653

Pre Gene Modal

BGIBMGA005512

Annotation

PREDICTED:_sec1_family_domain-containing_protein_2-like_[Amyelois_transitella]

Location

Bomo_Chr8(+):11489501-11497135      View in EpiBrowser

Full name

Sec1 family domain-containing protein 2      

Alternative Name

Neuronal Sec1
Syntaxin-binding protein 1-like 1

Location in the cell

Cytoplasmic   Reliability : 1.163 Nuclear   Reliability : 1.792

CDS

ATGTCCGATTCATCTGTAAAAGAATTCTGTAAGACTTGGTGGGCCGAAGTTTACAACAGAATTATTGGTGCTGTTGTCTTCTTGGATGATGCTAGTTCCGAATGTCTTCATTGGGATGGGGGCCTTTTCAACCTGCTCGAAGGAGGTGCTGTTGCAGTTAAAAGTTTATCTCCATTTGAGTGTGCGACAAAAGATCAAAGGAAAGGAGTATTCATAACCCAGACTACTTCCACACAACTACGTACAATACAAGACATTATCAAACACAGTGATTTCTCACATTGTACACTGATATCATGTGTCAGTTTGGATGTTGTATACTTGGAGCTCCATGAAGGTAAAGATGTGAGTGATGTCATCACTGCTGGAAGAGGGCCTGCGGAGGCTACTAAGATGCTGGAGGATATGATGGTTCAGTGGATCGGAAGAAGTCCATGTGCCGTCCAAGTAGTGCACATACCGATCTTCACAATTTCTCCAACAAATGTAGTATTTCTGACTCCACCATTTCATGCCATGTTCCCTCTCTATGATGGTAGACTGACACCGGAGACAACTTCAGTAGATCTATATACTTTAAAGAGTGAGGAAAGATCTCAGATAAGAAGATTAGCCAGTTGTCTTAATAGCATGTTTGAATCAATGAACTTAAAAGAGGATGTCTATTACATGGGAACCTATAGCTCTTTATTAGCTGGTGTACTAGAAAATTCACCTGTTTGTCTGTCAAGAAGAAAGAATTGCACGAATCCTGCGTCATTAATAATAGTGGACCGAACCTTAGATCTCTGCAGTGTGACAAGTCATTCTATGGAATCTGTTCTGGACAAAGTGTTGGCAGTTTTACCAAAGTTCCCAGGGCATTCGAATGAAGTTGCCGTTGATATGTCTCCGCTTTGTGAAGCTAATGTAATCACCCATCCAGATGACCTACAACTAAGCCCGGGCTGTCTCTACCACGCGAACGATGATATATGCACACAAACCTTTGAACACATGCTAAACAAGTCTCAAAAGGAAGTGATGTTTGATTTATACAATAAATTGTCAAAGTTGGACGTACAGCGGTCACCGAGTCCCAAGACTCTGCTCAGGGTTACTCCACAGAGCGTCGACAAGATCGTTACGGCGGCTAAAGGGAATTATGACGTAATAAGCAATCATCTAGGCATACTACAGCTGGCATTAGCCGTCGTACAAACGTTGAAGTCGCCGAGACGAGCTCAATTGGAACTCCTGGCGAGCTTAGAGAAACAGGTCCTTCAGAATTTGGGTGCCAGCCGAGACTCCACTAGTGTTTTGCAACAGATGAGTACATTAATAAAATCCCGTAAAGAACGCAATTTGCCTTTGGATAATCTGCTCGCGTTAATCATTCACATATACTCTCTCGGCGGTACTGAAGTCACATTCTCAAAAACTCATGAACAGGATCTAATTGAGGCTCTCAGTGTTGCCATGTTCGAAGATCACAAAAGCTTATTTCCTCAAGTTGAAGGGCATATAGTAACACCGGAGGAATGTGATGAGATTTCTCAAAAAACATTGAAGCGACTAAAGGAAATAGCATTGATGAGGAAAAATTTGCAGAAATACAACTCGTTAATAAAGACAAGCGAGACAGGAATCGGGCACGAATACCGCGGCCTGTTACTGCAGCTAGTCGATGACCTCGTGGACACGGATAGACCAGAACTAACAGACCTGCGACACAGAAATGAGGGTATCAAAGATTTGCTGAGAAGCGGCTTGAACATCTTGACAAGCAAGAAATCTCGCACTTTGAAACATCCACTCGAGAGTCCCACTGTGATTTTGTTTGTGATTGGAGGCGTGACCGCTGAGGAATGCAAGCGTCTGCACCGCAGCGTCATCACGAGCGGCGTCGACAACGCCGTGCTCATCGGGGCCACTAAGTTCGTAACGCCGGTCGAAGCTATGAAAGATGTTTTGCTTTTATAG

Protein

MSDSSVKEFCKTWWAEVYNRIIGAVVFLDDASSECLHWDGGLFNLLEGGAVAVKSLSPFECATKDQRKGVFITQTTSTQLRTIQDIIKHSDFSHCTLISCVSLDVVYLELHEGKDVSDVITAGRGPAEATKMLEDMMVQWIGRSPCAVQVVHIPIFTISPTNVVFLTPPFHAMFPLYDGRLTPETTSVDLYTLKSEERSQIRRLASCLNSMFESMNLKEDVYYMGTYSSLLAGVLENSPVCLSRRKNCTNPASLIIVDRTLDLCSVTSHSMESVLDKVLAVLPKFPGHSNEVAVDMSPLCEANVITHPDDLQLSPGCLYHANDDICTQTFEHMLNKSQKEVMFDLYNKLSKLDVQRSPSPKTLLRVTPQSVDKIVTAAKGNYDVISNHLGILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLPLDNLLALIIHIYSLGGTEVTFSKTHEQDLIEALSVAMFEDHKSLFPQVEGHIVTPEECDEISQKTLKRLKEIALMRKNLQKYNSLIKTSETGIGHEYRGLLLQLVDDLVDTDRPELTDLRHRNEGIKDLLRSGLNILTSKKSRTLKHPLESPTVILFVIGGVTAEECKRLHRSVITSGVDNAVLIGATKFVTPVEAMKDVLLL

Description

May be involved in protein transport.

Similarity

Belongs to the STXBP/unc-18/SEC1 family.

Keywords

Alternative splicing   Complete proteome   Protein transport   Reference proteome   Transport  

Feature

chain  Sec1 family domain-containing protein 2
splice variant  In isoform 4.

Uniprot

H9J7M0   A0A2A4J3N2   A0A194PQP6   A0A194QTC7   A0A212FL99   A0A2H1V2I0   + More
A0A0L7L2T5   A0A2J7RM52   A0A067R6N7   A0A2J7RM27   A0A0V0G6H3   A0A069DZE7   A0A023F969   A0A0P4VMU9   R4G813   T1J9Z1   H3AEC3   A0A3L8DDA9   A0A026WRT2   A0A151JMS8   F4WKT2   A0A151PAK4   E2AJ45   A0A158P3Z1   A0A151X0H9   A0A195CN69   E2BUX0   A0A151JVL9   A0A1S3JPG4   A0A0L8GSS7   I3J4K3   A0A1S3J8I2   A0A1S3J913   A0A3B4FW51   A0A3P8Q314   A0A232FD87   K9IMB6   E9J1R1   A0A2G8JSZ3   A0A3P9CZC2   A0A3B3CB14   F1RBN1   A0A384A0G9   A0A3S2PZ18   K7IMU8   A0A2Y9DXK4   A0A1S3PA72   A0A210R165   A0JN38   Q5U2R9   A0A384A0I3   A0A2C9KS83   A0A1L8HTQ6   A0A2Y9MLY1   A0A3Q3G8Z2   H2UMU3   W4Y112   A0A1A7WXU0   A0A3Q3M4J4   A0A310SP04   A0A340X3K5   V3Z5D0   A0A1U7QTX2   A0A1S3KIM4   A0A154PNC5   A0A195BKZ3   W5N9U0   G1SDX5   A0A1A8FF21   A0A341BL70   A0A0P5S609   A0A1A8IE02   A0A0P5QIG0   A0A0P5S4C2   A0A2Y9MCU1   W5QBH7   A0A2I4CS52   A0A2U3VMP3   A0A1S3EK51   A0A0J7KKB0   A0A0N7ZIZ4   Q8BTY8   A0A0P6HN87   A0A1A8PV10   L7MI57   A0A384CXX1   A0A3Q1HYH5   A0A2Y9JL20   A0A3Q0G381   Q3UPD0   A0A2Y9MGA5   A0A0P4VYK3   A0A2Y9I062   A0A2U3XSL0   A0A224Z8D1   A0A286XJX5   A0A0P5SNS9   A0A3B3RH14   A0A1A8QV22   A0A3Q7WI06  

Pubmed

19121390    26354079    22118469    26227816    24845553    26334808    + More
25474469    27129103    9215903    30249741    24508170    21719571    22293439    20798317    21347285    25186727    26383154    28648823    21282665    29023486    29451363    23594743    20075255    28812685    19393038    15489334    15057822    15562597    27762356    21551351    23254933    21993624    20809919    16141072    21183079    25576852    10349636    11042159    11076861    11217851    12466851    16141073    28797301    29240929   

EMBL

BABH01014021    NWSH01003215    PCG66757.1    KQ459595    KPI95637.1    KQ461154    + More
KPJ08564.1    AGBW02007817    OWR54512.1    ODYU01000166    SOQ34474.1    JTDY01003415    KOB69594.1    NEVH01002577    PNF41889.1    KK852705    KDR18013.1    PNF41887.1    GECL01002502    JAP03622.1    GBGD01000770    JAC88119.1    GBBI01001259    JAC17453.1    GDKW01000706    JAI55889.1    GAHY01001772    JAA75738.1    JH431980    AFYH01128740    AFYH01128741    AFYH01128742    AFYH01128743    AFYH01128744    AFYH01128745    AFYH01128746    AFYH01128747    AFYH01128748    AFYH01128749    QOIP01000009    RLU18374.1    KK107119    EZA58732.1    KQ978949    KYN27363.1    GL888206    EGI65174.1    AKHW03000533    KYO46000.1    GL439967    EFN66485.1    ADTU01008623    KQ982612    KYQ53880.1    KQ977513    KYN02158.1    GL450772    EFN80507.1    KQ981701    KYN37504.1    KQ420672    KOF79650.1    AERX01004391    AERX01004392    AERX01004393    AERX01004394    AERX01004395    AERX01004396    NNAY01000428    OXU28463.1    GABZ01004797    JAA48728.1    GL767674    EFZ13181.1    MRZV01001308    PIK38839.1    BX511028    CABZ01039446    CABZ01039447    CABZ01039448    CABZ01079987    CU693368    LO018613    CM012440    RVE73817.1    NEDP02000942    OWF54641.1    BC126501    AAI26502.1    AABR07014890    AABR07014891    AABR07072395    AABR07072396    AC099101    AC114452    AC128952    BC085889    AAH85889.1    CM004466    OCT99496.1    AAGJ04127454    HADW01009118    HADX01011269    SBP10518.1    KQ761783    OAD57062.1    KB203219    ESO85938.1    KQ434998    KZC13343.1    KQ976453    KYM85352.1    AHAT01002256    AHAT01002257    AHAT01002258    AHAT01002259    AHAT01002260    AHAT01002261    AHAT01002262    HAEB01011100    HAEC01002655    SBQ57627.1    GDIQ01109036    JAL42690.1    HAED01008927    HAEE01017079    SBQ95139.1    GDIQ01120133    JAL31593.1    GDIQ01092590    JAL59136.1    AMGL01098545    AMGL01098546    AMGL01098547    AMGL01098548    AMGL01098549    AMGL01098550    AMGL01098551    AMGL01098552    AMGL01098553    AMGL01098554    LBMM01006176    KMQ90853.1    GDIP01240785    JAI82616.1    AK036637    AK044408    AK047026    AK047738    AK050673    AK054548    AK088353    AK089011    AK140246    BC042528    GDIQ01024653    JAN70084.1    HAEF01015428    HAEG01009570    SBR84852.1    GACK01001532    JAA63502.1    AK143615    BAE25466.1    GDRN01087114    JAI61076.1    GFPF01011604    MAA22750.1    AAKN02028258    AAKN02028259    AAKN02028260    AAKN02028261    AAKN02028262    AAKN02028263    GDIQ01101593    JAL50133.1    HAEH01013324    HAEI01016237    SBR97108.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000235965    UP000027135    UP000008672    UP000279307    UP000053097    UP000078492    UP000007755    UP000050525    UP000000311    UP000005205    UP000075809    UP000078542    UP000008237    UP000078541    UP000085678    UP000053454    UP000005207    UP000261460    UP000265100    UP000215335    UP000230750    UP000265160    UP000261560    UP000000437    UP000261681    UP000002358    UP000248480    UP000087266    UP000242188    UP000009136    UP000002494    UP000076420    UP000186698    UP000248483    UP000261660    UP000005226    UP000007110    UP000261640    UP000265300    UP000030746    UP000189706    UP000076502    UP000078540    UP000018468    UP000001811    UP000252040    UP000002356    UP000192220    UP000245340    UP000081671    UP000036403    UP000000589    UP000261680    UP000257200    UP000248482    UP000189705    UP000248481    UP000245341    UP000005447    UP000261540    UP000286642   

PRIDE

H9J7M0    Q8BTY8   

Pfam

PF00995   Sec1

Interpro

IPR027482   Sec-1-like_dom2        + More
IPR001619   Sec1-like       
IPR036045   Sec1-like_sf       

SUPFAM

SSF56815   SSF56815       

Gene 3D

3.40.50.1910    

ProteinModelPortal

H9J7M0   A0A2A4J3N2   A0A194PQP6   A0A194QTC7   A0A212FL99   A0A2H1V2I0   + More
A0A0L7L2T5   A0A2J7RM52   A0A067R6N7   A0A2J7RM27   A0A0V0G6H3   A0A069DZE7   A0A023F969   A0A0P4VMU9   R4G813   T1J9Z1   H3AEC3   A0A3L8DDA9   A0A026WRT2   A0A151JMS8   F4WKT2   A0A151PAK4   E2AJ45   A0A158P3Z1   A0A151X0H9   A0A195CN69   E2BUX0   A0A151JVL9   A0A1S3JPG4   A0A0L8GSS7   I3J4K3   A0A1S3J8I2   A0A1S3J913   A0A3B4FW51   A0A3P8Q314   A0A232FD87   K9IMB6   E9J1R1   A0A2G8JSZ3   A0A3P9CZC2   A0A3B3CB14   F1RBN1   A0A384A0G9   A0A3S2PZ18   K7IMU8   A0A2Y9DXK4   A0A1S3PA72   A0A210R165   A0JN38   Q5U2R9   A0A384A0I3   A0A2C9KS83   A0A1L8HTQ6   A0A2Y9MLY1   A0A3Q3G8Z2   H2UMU3   W4Y112   A0A1A7WXU0   A0A3Q3M4J4   A0A310SP04   A0A340X3K5   V3Z5D0   A0A1U7QTX2   A0A1S3KIM4   A0A154PNC5   A0A195BKZ3   W5N9U0   G1SDX5   A0A1A8FF21   A0A341BL70   A0A0P5S609   A0A1A8IE02   A0A0P5QIG0   A0A0P5S4C2   A0A2Y9MCU1   W5QBH7   A0A2I4CS52   A0A2U3VMP3   A0A1S3EK51   A0A0J7KKB0   A0A0N7ZIZ4   Q8BTY8   A0A0P6HN87   A0A1A8PV10   L7MI57   A0A384CXX1   A0A3Q1HYH5   A0A2Y9JL20   A0A3Q0G381   Q3UPD0   A0A2Y9MGA5   A0A0P4VYK3   A0A2Y9I062   A0A2U3XSL0   A0A224Z8D1   A0A286XJX5   A0A0P5SNS9   A0A3B3RH14   A0A1A8QV22   A0A3Q7WI06  

KEGG

101737837    no KO assigned | (RefSeq) sec1 family domain-containing protein 2-like

GO

GO:0006904   GO:0015031   GO:0016192   GO:0005751   GO:0006914   GO:0009058   GO:0005089   GO:0035023   GO:0005515   GO:0016742   GO:0003824  

PANTHER

PTHR11679  

Length:

653

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.889300000000001

Exp number, first 60 AAs:

0.01209

Total prob of N-in:

0.03858

outside

1  -  653

 

 

Pi

220.357943

Theta

164.509203

Tajima's D

1.377622

CLR

0.272198

CSRT

0.754562271886406

Interpretation

Uncertain