SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04650  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005301
Annotation
PREDICTED:_uncharacterized_protein_LOC778506_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.368 Nuclear   Reliability : 1.802
 

Sequence

CDS
ATGAAGGTCTTACTATTGTGCATAGCCTTCGCGGCTGTGAGTTTGGCGATGCCAGTGGCGGAGGAAAAGGACGTAGTTCCCGCTCAACCAATTCTAGAAGTCGCGCCCAAAATTGATGACTCGGTTAAACCTACCGAAGTAGCTGCTGCCACTGAAGAGAAGAAAGCCGAACCTGCTCCAGTTAGTAACGACGAGGTACCCGCTATACCAGAGGCCAAAAAGGACGATATAGCCCCAGAAGACTCCGATATCGCGAAACCGGAAACCGTTCCTGAAGTGAAAACCGAAGAAAAAGTCCCGGAAGCAAAATCATCCGAGATTCCCGATGCTGAAGCAAAATCTGCTGATATTAAAGTGGAAGAACCAGCTGCTCAGCCTGAAGATTCAAAAACTGAAGTACAAGCTACCGTCGCTGAAATTTCAAAAGAAGAAAAACCTAGTGCTACTGATGCAGAAGGTTCTGCCGACTCAGCTGCCATCATTCCCAACATGGTGAAGAAGATCGACTTGGCTCCTACTGTAGAAAGCGATGCTGCTGCAATTCCTGAAATTAAGACTCCTGAAGCAGCCGATGCTCCTAAGTTAGCAGACAATCCTGTAGATGAGGACAAGCCTGCTGACATTTCACCTGATGCGCCGAAAGCTGAAGCTAAGTCGGCTGATGACTCTGCGACTACAGCTAAAGATGACATTCCAGTAGCACCCGAAACTAGCGACGACAAAAACAAAGAAACAAAAACCAAGGACAAAGACTCGTCTAGTTCCTCAGAAAGTTCGCAATCATCTGACGAATCCAAATCTGAAGAAAACAAATCTTAG
Protein
MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAATEEKKAEPAPVSNDEVPAIPEAKKDDIAPEDSDIAKPETVPEVKTEEKVPEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATTAKDDIPVAPETSDDKNKETKTKDKDSSSSSESSQSSDESKSEENKS

Summary

ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.997041
 
 
Length:
272
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.5352
Exp number, first 60 AAs:
0.5352
Total prob of N-in:
0.03713
outside
1  -  272
 
 

Population Genetic Test Statistics

Pi
206.991801
Theta
180.214193
Tajima's D
0.674871
CLR
0.756907
CSRT
0.566471676416179
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
29197581 TEVQATVAEISK 100.00 8e-17
29197581 SADIKVEEPAAQPEDSK 100.00 2e-11
25860555 SSQSNSNSSNNSKSSSQSSSSNNSSGSKGSGSEESSNGGSGSGR 96.43 3e-10
27102218 IDIAPTVESDAAAIPEIK 96.43 3e-10
29197581 KIDIAPTVESDAAAIPEIK 96.43 3e-10
29197581 IDIAPTVESDAAAIPEIK 96.30 2e-09
24093152 EEIYSEAIGHCSSAIEIR 100.00 4e-09
29197581 DVVPAQPIIEVAPK 100.00 4e-09
24093152 VEEPAAQPEDSK 100.00 2e-08
29197581 VEEPAAQPEDSK 100.00 2e-08
28467696 MPSVGIVNQWYER 95.24 2e-06
29197581 SADDSATTAKDDIPVAPETSDDKNK 100.00 4e-04
28556443 VEEPAAQPEDSK 100.00 0.019
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