SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04648  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005508
Annotation
PREDICTED:_bifunctional_coenzyme_A_synthase_isoform_X1_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.781 Mitochondrial   Reliability : 1.624
 

Sequence

CDS
ATGGCACATAATGGCCTCTTGTTTGTATCAAATGCTGCAAAAGCACACATTGCCTGTATGAAGGCAGCTAAGTATGTGCGGAATGTTATGTATGTGAAGATTAAAATAAATGCTGAGAATTCTTCACAAGTGATCGGTAGACAAATTGTAAACATTTATACAAAGGCTCAAACCAATATAGACATAAGGTTAATGGTGAAACCATATGAAAAAAGTAAGGATATTATCACACGTCAACCAATTGATTTGATTATGTATGACAGTGAATCAGCTAAAGAAGTCGAAGTTTTGAGAAAGTCAGTGAAGTCTCTGGACAGAGGATACAGATTGCAGAATATAGACACCAGTGACTCACCGATAGAGAATAATGTCAATGAAGAAGTAAAGGCGTATGAGTATGTTGCTCTGGGAGGGACATTTGACCGACTGCATAATGGACACAAGATATTGCTGTCACAAGCTGTGCTGCGCTCCACTAGGCATGTCACGGTGGGCGTCACTGATGTTAATATGATTCAGTCCAAGAAGCTATGGGAATTGATTGAACCAGTTGAAAAAAGGATTGAAACTGTTCTACAATTTCTAAACGATATAAATCCAGACTTGGAATACAATGTTTTTCCGCTGAAAGATCTTTATGGACCTACAAAAGATGATCCCAAATTTCAGTTAATAGTTGTTAGCGAAGAGACCGTCCGAGGTGCAGTGAAAATCAATGAAAAACGTCAAGAGAAAAACTTAAAAAAATTAGACACGTACGTCATAGAATTGGCGCAGGACTCGCATCCGAGAAGACATCACGAGGAAGAAGACAAAGTCAGCTCGAGTAATCAGAGAATGAGATTGTTGGGTACTCTACTCAGACCTCCCAGGCCCAATCCAAATATACCGGATTGGCCGTACGTGATCGGTTTGGCGGGCGGCATCGCCAGCGGCAAGAGTAATATTGCGGAAAAACTCAAATCAAAAGGTGCGGCGATAATAAACTGTGATATAATAGCCCACGAGCTCTACAGGCCGGGGTTGCCGCTCAACACGACTATAGCGCAAAGCTTCGGTGACCACGTCATCACATCCGACGGCGAAGTGGACAGGAGGAAGCTGGGTCAGATTGTTTTTAGTGATAAGAGTCAGCTACAAAAGTTGAATGAACTAGTATGGCCGGCAGTAATCGAAGAGACGCAGAGGAGAGTCGTGGCTCTCGGCAAACAAGGATATAAGGTGGTGGTGATGGAAGCGGCTGTGATGGTGCGAGCTAAGTGGTACGAAAGATGTCATCAGCTATGGGCGGTGATCATACCGCCGGATGAGGCCATAAAAAGGCTGCAAAAACGCAATGGACTGACCGAAGAAGAAGCGAGACAGCGTATAGAGGCCCAACCCTCGAATTCGGAACAAGTGGCTCACGCCAATATAGTGTTCAGTCCGTTCTGGAGCTACGAATATACGCAATCGCAAATCGATAGAGCATGGCAACAATTAAATGAATACCTGGACAACAAGAAGTGA
Protein
MAHNGLLFVSNAAKAHIACMKAAKYVRNVMYVKIKINAENSSQVIGRQIVNIYTKAQTNIDIRLMVKPYEKSKDIITRQPIDLIMYDSESAKEVEVLRKSVKSLDRGYRLQNIDTSDSPIENNVNEEVKAYEYVALGGTFDRLHNGHKILLSQAVLRSTRHVTVGVTDVNMIQSKKLWELIEPVEKRIETVLQFLNDINPDLEYNVFPLKDLYGPTKDDPKFQLIVVSEETVRGAVKINEKRQEKNLKKLDTYVIELAQDSHPRRHHEEEDKVSSSNQRMRLLGTLLRPPRPNPNIPDWPYVIGLAGGIASGKSNIAEKLKSKGAAIINCDIIAHELYRPGLPLNTTIAQSFGDHVITSDGEVDRRKLGQIVFSDKSQLQKLNELVWPAVIEETQRRVVALGKQGYKVVVMEAAVMVRAKWYERCHQLWAVIIPPDEAIKRLQKRNGLTEEEARQRIEAQPSNSEQVAHANIVFSPFWSYEYTQSQIDRAWQQLNEYLDNKK

Summary

EMBL
BABH01014017    RSAL01000041    RVE50887.1    KQ459595    KPI95631.1    KQ461154    + More
KPJ08558.1    AGBW02009085    OWR51712.1    ODYU01003323    SOQ41923.1    NWSH01005690    PCG64051.1    PCG64050.1    PCG64052.1    PCG64048.1    KK107648    QOIP01000008    EZA48353.1    RLU19780.1    GL443548    EFN61885.1    GEBQ01001938    JAT38039.1    GL448457    EFN84613.1    GECU01005333    JAT02374.1    GFTR01006966    JAW09460.1    GBGD01001124    JAC87765.1    KQ434938    KZC12119.1    GDKW01000663    JAI55932.1    AAZX01007750    AAZX01007849    AAZX01009411    LBMM01005134    KMQ91793.1    KQ414855    KOC60160.1    CH479240    EDW37524.1    KK852470    KDR23193.1    GL762576    EFZ21073.1    CH379069    EAL29598.2    KQ981891    KYN33795.1    GEDC01020031    JAS17267.1    KQ435867    KOX70265.1    OUUW01000009    SPP85074.1    GL887974    EGI69332.1    CP012525    ALC43735.1    ADTU01022032    KQ971363    EFA07751.2    KQ976394    KYM93321.1    NEVH01006738    PNF36642.1    KQ980167    KYN17363.1    KK854635    PTY17502.1    GALX01002791    JAB65675.1    CH480817    EDW50605.1    CM002912    KMY97786.1    GFXV01001246    MBW13051.1    CH902618    EDV40320.1    CH963847    EDW72993.1    GANO01003156    JAB56715.1    ABLF02034945    GFDF01002204    JAV11880.1    GEZM01092875    JAV56431.1    AJVK01013664    AE014296    AAF50749.2    BT024307    ABC86369.1    CVRI01000053    CRK99796.1    PNF36641.1    CM000159    EDW93537.1    CH933816    EDW17267.1    DS232029    EDS32496.1    ACPB03014260    CH940647    EDW68698.1    KQ982422    KYQ56622.1    KZ288223    PBC32004.1    GDHF01024142    JAI28172.1    GFDF01002203    JAV11881.1    CH916366    EDV95882.1    GGMS01007353    MBY76556.1    BT127468    AEE62430.1    CH954178    EDV51043.1    GFDL01009669    JAV25376.1    JRES01000341    KNC32104.1    GAKP01004146    JAC54806.1    AJWK01016860    AJWK01016861    AJWK01016862    GDHF01018326    JAI33988.1    CH477281    EAT44932.1    APGK01058607    KB741291    ENN70523.1    KB632343    ERL93021.1    GAMC01003313    JAC03243.1    DS234989    EEB09930.1    DQ440150    ABF18183.1    AXCM01001822    APCN01004355    GECZ01003266    JAS66503.1    GFWV01010071    MAA34800.1    JXUM01015651    KQ560436    KXJ82428.1    ATLV01019698    KE525278    KFB44540.1    JXJN01001810    AAAB01008960    EAA11969.3    GGLE01001704    MBY05830.1   
Pfam
PF01121   CoaE        + More
PF01467   CTP_transf_like
PF00107   ADH_zinc_N
PF08240   ADH_N
PF00379   Chitin_bind_4
Interpro
IPR001977   Depp_CoAkinase        + More
IPR027417   P-loop_NTPase       
IPR004821   Cyt_trans-like       
IPR014729   Rossmann-like_a/b/a_fold       
IPR014183   ADH_3       
IPR013149   ADH_C       
IPR011032   GroES-like_sf       
IPR036291   NAD(P)-bd_dom_sf       
IPR013154   ADH_N       
IPR002328   ADH_Zn_CS       
IPR000618   Insect_cuticle       
IPR031311   CHIT_BIND_RR_consensus       
SUPFAM
SSF52540   SSF52540        + More
SSF51735   SSF51735       
SSF50129   SSF50129       
Gene 3D
PDB
2F6R     E-value=7.39155e-39,     Score=404

Ontologies

Topology

Length:
502
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00961999999999997
Exp number, first 60 AAs:
0.00517
Total prob of N-in:
0.00075
outside
1  -  502
 
 

Population Genetic Test Statistics

Pi
174.281061
Theta
204.179956
Tajima's D
-0.877566
CLR
0.529933
CSRT
0.15949202539873
Interpretation
Possibly Positive selection
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