SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04646
Pre Gene Modal
BGIBMGA005507
Annotation
methuselah-like_protein_10_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.85
 

Sequence

CDS
ATGTCAATATACAACAATTCGGTTGCGTCCTCGCTGGTGGCTGCCGTCTGCTACCCTGACAGCGTTAGCAGCGACGACAACCACACGCTTTACATCGCGTATGCCGTTGGTCTTCTCCTGTCCGTGCCTTTTCTCCTCGCTACGTTCCTGGTATACGCCATGATCCCTGAGCTGAGGAACCTACACGGCATGTGTCTGATGGCGTATTGCGCGGGATTAATCGTCGGCTACCCCTTCCTTTCGTACCTGAAGCTGCACGTTGGCAGAATCGGAGCCAATATGACAGGATGCATTGTGTCTGCTTTTTTCGTGTACTACGCGTTTCAAACAACTTTCTTCTGGCTAAACGTAATGTGCTTCGATATATGGAGGACTTTCAGCGGTTATCGTGGTGGTAGCATGAACAAGCGCCGTGAAACGCGAAGCTGA
Protein
MSIYNNSVASSLVAAVCYPDSVSSDDNHTLYIAYAVGLLLSVPFLLATFLVYAMIPELRNLHGMCLMAYCAGLIVGYPFLSYLKLHVGRIGANMTGCIVSAFFVYYAFQTTFFWLNVMCFDIWRTFSGYRGGSMNKRRETRS

Summary

Similarity
Belongs to the G-protein coupled receptor Fz/Smo family.
EMBL
HQ188201    AEM43036.1    ODYU01002552    SOQ40206.1    JTDY01001460    KOB73813.1    + More
GDQN01004782    JAT86272.1    GDQN01006455    JAT84599.1    KQ461154    KPJ08557.1    GDQN01002620    JAT88434.1    AGBW02009085    OWR51711.1    BABH01014015    KQ459595    KPI95630.1    NWSH01000966    PCG73367.1    NEVH01006732    PNF36788.1    GFDF01007357    JAV06727.1    GFDF01007356    JAV06728.1    GFDL01007037    JAV28008.1    GFDL01007020    JAV28025.1    DS232324    EDS40045.1    GAPW01001180    JAC12418.1    UFQT01001465    SSX30677.1    UFQT01000196    SSX21530.1    SSX21527.1    SSX30675.1    SSX21528.1    SSX30676.1    SSX21526.1    SSX21529.1    JXUM01014371    JXUM01014372    JXUM01014373    JXUM01014374    JXUM01014375    JXUM01014376    JXUM01014377    JXUM01014378    KQ560401    KXJ82611.1    GL440425    EFN65885.1    AJWK01006988    AJWK01006989    GGMR01009795    MBY22414.1    QOIP01000011    RLU16797.1    DS235289    EEB14456.1    KQ434783    KZC04727.1    KQ982476    KYQ56046.1    GECU01017005    JAS90701.1    GECU01023436    JAS84270.1    APCN01000032    HQ188200    AEM43035.1    AAAB01008960    EAA11607.3    KQ435724    KOX78511.1    GEBQ01026124    JAT13853.1    KQ978957    KYN27327.1    ADTU01025461    ADTU01025462    CH477715    EAT36973.2    AXCN02000556    GBYB01014511    JAG84278.1    KQ976472    KYM83995.1    GECU01011109    GECU01002381    JAS96597.1    JAT05326.1    GEDC01018773    GEDC01009262    GEDC01000043    JAS18525.1    JAS28036.1    JAS37255.1    AXCM01019671    KQ978023    KYM98041.1    GECZ01024998    JAS44771.1    GL888439    EGI60813.1    AXCM01013309    AXCM01013310    GEDC01018212    GEDC01005937    GEDC01001428    JAS19086.1    JAS31361.1    JAS35870.1    KK853008    KDR12560.1    GFXV01000486    MBW12291.1    GEDC01020320    JAS16978.1    GEBQ01013134    JAT26843.1    ADMH02001746    ETN61223.1    GECZ01012105    JAS57664.1    KQ981636    KYN38891.1    GECZ01025080    JAS44689.1    AXCM01007268    ABLF02038161    DQ295917    ABC24708.1    CVRI01000050    CRK99459.1    ATLV01024093    KE525349    KFB50583.1    PYGN01000041    PSN56483.1    APCN01000034    GL440209    EFN66138.1    EDO63835.1    SSX21523.1   
Pfam
PF06652   Methuselah_N        + More
PF00002   7tm_2
PF01534   Frizzled
Interpro
IPR010596   Methuselah_N_dom        + More
IPR017981   GPCR_2-like       
IPR036272   Methuselah_N_sf       
IPR000832   GPCR_2_secretin-like       
IPR023311   Methusela_ecto_dom_2       
IPR000539   Frizzled/Smoothened_TM       
IPR017452   GPCR_Rhodpsn_7TM       
SUPFAM
SSF63877   SSF63877       
Gene 3D

Ontologies

Topology

Length:
142
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
67.41153
Exp number, first 60 AAs:
23.76196
Total prob of N-in:
0.06543
POSSIBLE N-term signal
sequence
outside
1  -  31
TMhelix
32  -  54
inside
55  -  60
TMhelix
61  -  83
outside
84  -  97
TMhelix
98  -  120
inside
121  -  142
 
 

Population Genetic Test Statistics

Pi
180.772017
Theta
155.581475
Tajima's D
0.3153
CLR
0.459111
CSRT
0.462826858657067
Interpretation
Uncertain
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