Gene

KWMTBOMO04636  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005506

Annotation

PREDICTED:_prostaglandin_reductase_1-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr8(+):11269331-11272590      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 4.053

CDS

ATGGTTATAGCGAAAAAAATAATAGTAGTAAACCCATTTGTTGGTGTACCCAAACATAATGATTTTGATATAGTTCAAGAGGAACTTTCCGAATTACAAGAAAGTGAGTTTCTAGCAGAAGCAATATACTTTAGTGTCGATCCTTATCAAAGAATGAAACTAGGCAATGTATATCCTTGTGATATGATTGGTGGACAAATTGCCAGAGTTATTGAAAGTAAAAATACCGAGTATCCTGTTGGGACACTGGTTATGGGTCACTTTGGCTGGAGAACACATACAATCACTAAACCAGAGAATGAAAAGCTCTGTCAACAAAAACCCTACTTGTATAAACTACCTGACTTTGAACATCTACCTGTGTCTTTGGGCCTTGGTGTCTGCGGTAGAGTAGGAAATACCGCATATTTCGGCTTTAGTCAAATCTGCCAACCAAAACCGGGTGAAACTGTAGTAGTATCGGGTGCGGCAGGAGCTGTGGGGTCCCATGTTGGTCAAATTGCGAAAATAATGGGTTGTGTAGTTATAGGGTTCGCAGGCACAGATGAAAAATGCCAATGGTTGATTCAGGAAGCTGGCTTTGATCACGTAGCAAATTATAAAACTGCTGACATACCTACATTCCTCAAAGGTACTGCTCCCAACGGTGTAGACTGCTATTTTGATAATGTGGGTGGAGAGCTCAGCAGTGTAGTTTTATCTCACATGAGAACTTTTGGTAGAGTTGCGGTCTGTGGCGCTATTTCAACATACAACGAAACAAATGCAGATAAACTTAAAGCCACTGTAGTTCAACCATCAATTGTAAGTAAACAGTTGAAAGTAGAAGGGTTCCAAGTGAATAGATTTGCCGACAGGAATATGGAAGGCATTCAGAAAAACTTGGCTTGGGTCAAAAGCGGTCAACTAAAGTACAAGGAACATCTTACTGAAGGCTTCGAATCAGTCATCGATGCATTTATCGGGCTGTTCAGAGGTGACAACATTGGAAAGAGTATAGTCAAAGTAACGTAA

Protein

MVIAKKIIVVNPFVGVPKHNDFDIVQEELSELQESEFLAEAIYFSVDPYQRMKLGNVYPCDMIGGQIARVIESKNTEYPVGTLVMGHFGWRTHTITKPENEKLCQQKPYLYKLPDFEHLPVSLGLGVCGRVGNTAYFGFSQICQPKPGETVVVSGAAGAVGSHVGQIAKIMGCVVIGFAGTDEKCQWLIQEAGFDHVANYKTADIPTFLKGTAPNGVDCYFDNVGGELSSVVLSHMRTFGRVAVCGAISTYNETNADKLKATVVQPSIVSKQLKVEGFQVNRFADRNMEGIQKNLAWVKSGQLKYKEHLTEGFESVIDAFIGLFRGDNIGKSIVKVT

Uniprot

H9J7L4   A0A2A4JNH3   A0A2H1VZJ8   A0A0F6Q2L4   A0A212FPV5   A0A195CRZ6   + More
A0A0H4TG53   A0A0F7QHK0   A0A0F6Q1G9   A0A151XA86   A0A194PWW2   A0A0C9QI54   A0A1W4WHR3   A0A151XA81   A0A076FRA6   A0A194QU86   A0A195AV65   J3JTH7   A0A2J7RMM5   U4UP91   A0A151ITC7   A0A158NN98   A0A232EYT1   K7IZQ2   A0A195CRA2   A0A0K8TRN6   A0A182M242   A0A336LLS4   A0A195FY34   A0A0L7QX07   A0A0C9RL60   V5G6N9   A0A3S2PGN0   A0A2J7QDG3   A0A336MUL9   A0A1Q3FJZ7   A0A1Q3FGT3   A0A195E3V0   A0A1L8D6Z1   Q16Q92   A0A2J7QDH2   A0A2H1VHG3   F4WLJ1   F4WLJ0   K7J6V7   A0A2A4J3P3   A0A1L8D6M5   V5G5N6   A0A194PI33   A0A182V9A1   A0A182TNE7   B0X3D5   A0A182GJY5   A0A336LIG0   A0A067RFV9   A0A088AD26   A0A1B6H016   A0A194QU38   A0A2C9GSD3   Q7QF38   A0A182XUF9   A0A2S2NVC9   A0A2A3EK12   Q1HPR4   A0A195FVS8   B0X3D4   N6U1X5   A0A084VJ41   A0A2A4J403   J3JU26   A0A182GP62   A0A2P8XC47   A0A067RU96   A0A1Y1MN81   U5EP03   A0A151I080   A0A0L7K5Q5   A0A2S2R5N0   A0A1Q3FC97   H9JC55   J9JST7   A0A182RHK0   A0A182MT16   A0A1S4FWJ8   A0A212EJX1   A0A182N0L2   Q16M07   A0A336KZS9   I4DRQ9   A0A232EKY9   A0A1Q3FHV8   A0A151XA89   A0A026W461   A0A139WFS2   A0A1Y1MGI5   A0A182KAD0   A0A0C9PHB3   A0A1Q3FIB9   H9J7L3  

Pubmed

19121390    22118469    25803580    26354079    24817326    22516182    + More
23537049    21347285    28648823    20075255    26369729    17510324    21719571    26483478    24845553    12364791    14747013    17210077    24438588    29403074    28004739    26227816    22651552    24508170    18362917    19820115   

EMBL

BABH01014001    NWSH01000966    PCG73369.1    ODYU01005116    SOQ45664.1    KP237893    + More
AKD01746.1    AGBW02000285    OWR55798.1    KQ977372    KYN03267.1    KP899553    AKQ06152.1    LC017750    BAR64764.1    KP237896    AKD01749.1    KQ982351    KYQ57274.1    KQ459595    KPI95625.1    GBYB01000237    JAG70004.1    KYQ57275.1    KF960800    AII22002.1    KQ461154    KPJ08550.1    KQ976738    KYM75864.1    BT126534    AEE61498.1    NEVH01002552    PNF42096.1    KI208576    ERL95884.1    KQ981037    KYN10151.1    ADTU01021185    ADTU01021186    NNAY01001646    OXU23328.1    KYN03268.1    GDAI01001023    JAI16580.1    AXCM01004618    UFQT01000047    SSX18926.1    KQ981208    KYN44744.1    KQ414706    KOC63074.1    GBYB01007656    JAG77423.1    GALX01002716    JAB65750.1    RSAL01000041    RVE50877.1    NEVH01015823    PNF26620.1    UFQS01002035    UFQT01002035    SSX13033.1    SSX32473.1    GFDL01007200    JAV27845.1    GFDL01008278    JAV26767.1    KQ979685    KYN19823.1    GEYN01000025    JAV02104.1    CH477756    EAT36569.1    EJY57913.1    PNF26623.1    ODYU01002578    SOQ40267.1    GL888208    EGI64927.1    EGI64926.1    AAZX01001296    NWSH01003541    PCG66134.1    GEYN01000023    JAV02106.1    GALX01003076    JAB65390.1    KQ459603    KPI93076.1    DS232312    EDS39827.1    JXUM01068898    KQ562524    KXJ75701.1    UFQT01000020    SSX17884.1    KK852493    KDR22751.1    GECZ01021917    GECZ01001753    GECZ01001434    JAS47852.1    JAS68016.1    JAS68335.1    KQ461137    KPJ08829.1    APCN01001262    AAAB01008846    EAA06505.5    GGMR01008520    MBY21139.1    KZ288220    PBC32143.1    BABH01014929    DQ443338    ABF51427.1    KYN44745.1    EDS39826.1    APGK01045490    KB741037    KB632085    ENN74606.1    ERL88639.1    ATLV01013430    KE524855    KFB37985.1    PCG66132.1    BT126738    AEE61700.1    JXUM01014868    KQ560415    KXJ82523.1    PYGN01003332    PSN29576.1    KK852415    KDR24385.1    GEZM01028003    JAV86528.1    GANO01000371    JAB59500.1    KQ976637    KYM78853.1    JTDY01010417    KOB58214.1    GGMS01016030    MBY85233.1    GFDL01009834    JAV25211.1    ABLF02035091    AGBW02014376    OWR41771.1    CH477884    EAT35376.1    UFQS01001180    UFQT01001180    SSX09563.1    SSX29364.1    AK405232    BAM20599.1    NNAY01003671    OXU19026.1    GFDL01007908    JAV27137.1    KYQ57273.1    KK107446    EZA50798.1    KQ971351    KYB26848.1    GEZM01036084    JAV82986.1    GBYB01000238    JAG70005.1    GFDL01007739    JAV27306.1    BABH01013997    BABH01013998    BABH01013999    BABH01014000   

Proteomes

UP000005204    UP000218220    UP000007151    UP000078542    UP000075809    UP000053268    + More
UP000192223    UP000053240    UP000078540    UP000235965    UP000030742    UP000078492    UP000005205    UP000215335    UP000002358    UP000075883    UP000078541    UP000053825    UP000283053    UP000008820    UP000007755    UP000075903    UP000075902    UP000002320    UP000069940    UP000249989    UP000027135    UP000005203    UP000075840    UP000007062    UP000076407    UP000242457    UP000019118    UP000030765    UP000245037    UP000037510    UP000007819    UP000075900    UP000075884    UP000053097    UP000007266    UP000075881   

PRIDE

H9J7L4    A0A088AD26    Q1HPR4    H9JC55    H9J7L3   

Pfam

PF16884   ADH_N_2        + More
PF00107   ADH_zinc_N
PF01035   DNA_binding_1
PF02870   Methyltransf_1N

Interpro

IPR020843   PKS_ER        + More
IPR014190   PTGR1       
IPR011032   GroES-like_sf       
IPR013149   ADH_C       
IPR041694   ADH_N_2       
IPR036291   NAD(P)-bd_dom_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR001497   MethylDNA_cys_MeTrfase_AS       
IPR014048   MethylDNA_cys_MeTrfase_DNA-bd       
IPR036631   MGMT_N_sf       
IPR008332   MethylG_MeTrfase_N       
IPR036217   MethylDNA_cys_MeTrfase_DNAb       

SUPFAM

SSF50129   SSF50129        + More
SSF51735   SSF51735       
SSF46767   SSF46767       
SSF53155   SSF53155       

Gene 3D

1.10.10.10    

CDD

cd08294  leukotriene_B4_DH_like
cd06445  ATase

ProteinModelPortal

H9J7L4   A0A2A4JNH3   A0A2H1VZJ8   A0A0F6Q2L4   A0A212FPV5   A0A195CRZ6   + More
A0A0H4TG53   A0A0F7QHK0   A0A0F6Q1G9   A0A151XA86   A0A194PWW2   A0A0C9QI54   A0A1W4WHR3   A0A151XA81   A0A076FRA6   A0A194QU86   A0A195AV65   J3JTH7   A0A2J7RMM5   U4UP91   A0A151ITC7   A0A158NN98   A0A232EYT1   K7IZQ2   A0A195CRA2   A0A0K8TRN6   A0A182M242   A0A336LLS4   A0A195FY34   A0A0L7QX07   A0A0C9RL60   V5G6N9   A0A3S2PGN0   A0A2J7QDG3   A0A336MUL9   A0A1Q3FJZ7   A0A1Q3FGT3   A0A195E3V0   A0A1L8D6Z1   Q16Q92   A0A2J7QDH2   A0A2H1VHG3   F4WLJ1   F4WLJ0   K7J6V7   A0A2A4J3P3   A0A1L8D6M5   V5G5N6   A0A194PI33   A0A182V9A1   A0A182TNE7   B0X3D5   A0A182GJY5   A0A336LIG0   A0A067RFV9   A0A088AD26   A0A1B6H016   A0A194QU38   A0A2C9GSD3   Q7QF38   A0A182XUF9   A0A2S2NVC9   A0A2A3EK12   Q1HPR4   A0A195FVS8   B0X3D4   N6U1X5   A0A084VJ41   A0A2A4J403   J3JU26   A0A182GP62   A0A2P8XC47   A0A067RU96   A0A1Y1MN81   U5EP03   A0A151I080   A0A0L7K5Q5   A0A2S2R5N0   A0A1Q3FC97   H9JC55   J9JST7   A0A182RHK0   A0A182MT16   A0A1S4FWJ8   A0A212EJX1   A0A182N0L2   Q16M07   A0A336KZS9   I4DRQ9   A0A232EKY9   A0A1Q3FHV8   A0A151XA89   A0A026W461   A0A139WFS2   A0A1Y1MGI5   A0A182KAD0   A0A0C9PHB3   A0A1Q3FIB9   H9J7L3  

PDB

1ZSV     E-value=2.13776e-65,     Score=631

KEGG

101737085    K13948 prostaglandin reductase 1 [EC:1.3.1.74 1.3.1.48] | (RefSeq) prostaglandin reductase 1-like

GO

GO:0005737   GO:0047522   GO:0032440   GO:0006281   GO:0003908   GO:0016491   GO:0000166   GO:0006508   GO:0008270   GO:0031012   GO:0005089   GO:0035023   GO:0005515   GO:0016742   GO:0003824   GO:0055114  

Length:

337

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04704

Exp number, first 60 AAs:

0.00047

Total prob of N-in:

0.03373

outside

1  -  337

 

 

Pi

131.810573

Theta

167.26574

Tajima's D

-0.666694

CLR

222.014221

CSRT

0.20213989300535

Interpretation

Possibly Positive selection