Gene

KWMTBOMO04633

Pre Gene Modal

BGIBMGA005504

Annotation

PREDICTED:_transmembrane_protein_120A_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr8(+):11224471-11240590      View in EpiBrowser

Full name

Transmembrane protein 120 homolog      

Location in the cell

PlasmaMembrane   Reliability : 3.455

CDS

ATGGAAGTTGAAGAATGTGTGAAGGAATGGGAGGATTTAGTAGCAGATTACAAGCGCTTAGAGACTATCAATAAAGAGTACACAACAAAATTAGAAGAAGTTGGCGAACTGCAAGCAGCATGTTTGAAGGAACTGGAACACCAGAAATATCGCATGTCAATTATTAATGCTGCATTGAAAAGGTTGGAAAAGAAAGGCGGTGTGAAAGATGAACGCGTCACAAACCTCGAGAAGGAGATAATGAAGAGGAAAGCGATGCTTCACGAGATAAAAGCCACGCTCCCCAAACAGAACAGCTTATATCTGCGCATCATATTAGGAAACGTTAATGTATCTATATTAAACAAGAATGACAAATTTAAATACAAAGACGAGTATGAAAAATTCAAATTGATCCTCAGTGCGATCGCATTTATTTTAGCTGTAGGAAATCTGTATATTGACTTCAGGCCGCTGCAATTGATTTTAATTTTTCTTCTCGTCTGGTACTACTGCACGCTTACGATCCGAGAGAGTATACTTAAAGTGAACGGCTCAAGGATAAAAGGATGGTGGCGCTTACATCACTTCATATCGACGGTGGTTGCGGGAATATTGCTTATATGGCCCCAGAACCAGCCTTGGGAGGAATTTAGGCACACCTTCATGTGGTTTATTGCTTATATAAGTGTTGTACAATACATGCAGTTCAGGTACCAGAGTGGAGTACTATACAGGCTCAAAGCCTTGGGCGCCAGGCATAATATGGATATCACGATCGAAGGATTCCATTCGTGGATGTGGCGTGGTCTATCATATCTATTGCCTTTCTTGTTTGGGGGATATGTTTTTCAACTGTACATCGCTTATACATTGTACCATTTGAGTTACCATCCCGAGGCGACTTGGCAGGTGCCATATTTAGCTGCCTTGTTCCTTACTTTGCACTGTTGCAACATGTATACCATATTAAGGACATTACGCAGGAAGGTTAAAGGAGGCCTGAAACTGAGATACAAGTTGCGCGCCATTGCGTATCGGCTCTCCAATGAGATCGTCGTACTGGAACAAAAATGGCGGCAAAACAAAGTCGAACAGAAAGCGGAATAA

Protein

MEVEECVKEWEDLVADYKRLETINKEYTTKLEEVGELQAACLKELEHQKYRMSIINAALKRLEKKGGVKDERVTNLEKEIMKRKAMLHEIKATLPKQNSLYLRIILGNVNVSILNKNDKFKYKDEYEKFKLILSAIAFILAVGNLYIDFRPLQLILIFLLVWYYCTLTIRESILKVNGSRIKGWWRLHHFISTVVAGILLIWPQNQPWEEFRHTFMWFIAYISVVQYMQFRYQSGVLYRLKALGARHNMDITIEGFHSWMWRGLSYLLPFLFGGYVFQLYIAYTLYHLSYHPEATWQVPYLAALFLTLHCCNMYTILRTLRRKVKGGLKLRYKLRAIAYRLSNEIVVLEQKWRQNKVEQKAE

Similarity

Belongs to the TMEM120 family.

Keywords

Coiled coil   Complete proteome   Glycoprotein   Membrane   Phosphoprotein   Reference proteome   Transmembrane   Transmembrane helix  

Feature

chain  Transmembrane protein 120 homolog

Uniprot

H9J7L2   A0A2H1VHE9   A0A194PQN4   A0A194QSQ3   S4Q095   A0A1E1WNR6   + More
A0A2A4IYH0   A0A2A4IXW2   A0A2J7Q8J3   A0A067RTI7   A0A2P8YR06   A0A195AVG2   A0A158NF48   A0A195E8C6   A0A0L7R8M0   A0A0M8ZSJ5   E9ID26   A0A026W2R5   A0A088APV8   E2B080   A0A2A3EI99   D6WH93   A0A1Y1N0H1   A0A0J7KY31   A0A1Q3FYR5   A0A0T6BE85   A0A1W4X4K8   A0A023EQX9   T1DEC3   A0A0K8TQ19   A0A195C425   A0A1B6L2L4   F4WEI9   A0A1B6HS06   E0VMX0   A0A182N8F2   A0A1D2NI48   T1E212   J3JUI3   A0A182Q6N7   A0A1L8DUU0   U4UKY9   N6SZG0   Q16NV2   A0A182U4M5   A0A182XBX6   A0A182UVS2   A0A182IAK7   K7IRZ8   Q7QF35   A0A1J1I9Q1   A0A2H8TRS2   A0A336MKB9   A0A2M4CI84   A0A2M4CIU0   A0A2M3Z7B0   B4JJE2   A0A084VNX3   A0A1B0B3X0   A0A182W5L5   A0A1B6DIN6   A0A2S2NFL9   A0A1A9XVI2   A0A2M3Z7E4   A0A1B6E3Y5   T1HQX1   A0A0P4VJF3   J9JQL9   D6X2J7   A0A069DSM7   A0A1A9W971   A0A226E637   A0A1A9V0K9   A0A182M9S0   D3TNX8   A0A1B0A8G5   A0A0V0G760   A0A182FIR7   A0A2M4AD83   A0A023FAD9   A0A182RHK2   T1DUG4   B4Q0V7   A0A1W4VS75   T1PC33   A0A2M4BRU8   A0A0M4ELC3   B3NTX3   B5DM77   A0A1W4VFI4   A0A1I8MKA9   A4V3W8   Q9U1M2   A0A162DGT0   B4R3U6   A0A0A1WFG4   A0A0P4YN02  

Pubmed

19121390    26354079    23622113    24845553    29403074    21347285    + More
21282665    24508170    30249741    20798317    18362917    19820115    28004739    24945155    24330624    26369729    21719571    20566863    27289101    22516182    23537049    17510324    20075255    12364791    17994087    24438588    27129103    26334808    20353571    25474469    17550304    15632085    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    10731137    12537569    18327897    25830018   

EMBL

BABH01013994    ODYU01002578    SOQ40265.1    KQ459595    KPI95622.1    KQ461154    + More
KPJ08548.1    GAIX01000178    JAA92382.1    GDQN01002410    JAT88644.1    NWSH01005291    PCG64314.1    PCG64316.1    NEVH01016952    PNF24904.1    KK852473    KDR23134.1    PYGN01000420    PSN46690.1    KQ976736    KYM76015.1    ADTU01013744    KQ979479    KYN21366.1    KQ414632    KOC67116.1    KQ435922    KOX68649.1    GL762454    EFZ21509.1    KK107522    QOIP01000001    EZA49324.1    RLU27293.1    GL444420    EFN60909.1    KZ288232    PBC31523.1    KQ971330    EFA00988.1    GEZM01016165    JAV91354.1    LBMM01002172    KMQ95184.1    GFDL01002326    JAV32719.1    LJIG01001286    KRT85654.1    GAPW01002070    JAC11528.1    GALA01001092    JAA93760.1    GDAI01001116    JAI16487.1    KQ978287    KYM95609.1    GEBQ01022096    JAT17881.1    GL888103    EGI67352.1    GECU01030233    JAS77473.1    DS235327    EEB14726.1    LJIJ01000033    ODN04921.1    GALA01001615    JAA93237.1    BT126897    AEE61859.1    AXCN02002153    GFDF01003886    JAV10198.1    KB632256    ERL90675.1    APGK01050872    KB741178    ENN73159.1    CH477807    EAT36034.1    APCN01001262    AAAB01008846    EAA06504.5    CVRI01000044    CRK96466.1    GFXV01004487    MBW16292.1    UFQS01001175    UFQS01001201    UFQT01001175    UFQT01001201    SSX09411.1    SSX09695.1    SSX29313.1    GGFL01000882    MBW65060.1    GGFL01000883    MBW65061.1    GGFM01003668    MBW24419.1    CH916370    EDV99694.1    ATLV01014939    ATLV01014940    KE524996    KFB39667.1    JXJN01008099    GEDC01023789    GEDC01022599    GEDC01011803    GEDC01011376    GEDC01008019    JAS13509.1    JAS14699.1    JAS25495.1    JAS25922.1    JAS29279.1    GGMR01003384    MBY16003.1    GGFM01003674    MBW24425.1    GEDC01004656    JAS32642.1    ACPB03027316    GDKW01002279    JAI54316.1    ABLF02022575    KQ971372    EFA09453.1    GBGD01001969    JAC86920.1    LNIX01000006    OXA52810.1    AXCM01004618    CCAG010008024    EZ423130    ADD19406.1    GECL01002232    JAP03892.1    GGFK01005420    MBW38741.1    GBBI01000271    JAC18441.1    GAMD01000049    JAB01542.1    CM000162    EDX01324.1    KA646249    AFP60878.1    GGFJ01006367    MBW55508.1    CP012528    ALC48196.1    CH954180    EDV45681.1    CH379064    EDY72594.1    AE014298    AAS65258.1    AFH07223.1    AHN59305.1    AL133506    AY118486    LRGB01001579    KZS11574.1    CM000366    EDX16958.1    GBXI01016876    JAC97415.1    GDIP01224987    JAI98414.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000235965    UP000027135    + More
UP000245037    UP000078540    UP000005205    UP000078492    UP000053825    UP000053105    UP000053097    UP000279307    UP000005203    UP000000311    UP000242457    UP000007266    UP000036403    UP000192223    UP000078542    UP000007755    UP000009046    UP000075884    UP000094527    UP000075886    UP000030742    UP000019118    UP000008820    UP000075902    UP000076407    UP000075903    UP000075840    UP000002358    UP000007062    UP000183832    UP000001070    UP000030765    UP000092460    UP000075920    UP000092443    UP000015103    UP000007819    UP000091820    UP000198287    UP000078200    UP000075883    UP000092444    UP000092445    UP000069272    UP000075900    UP000002282    UP000192221    UP000092553    UP000008711    UP000001819    UP000095301    UP000000803    UP000076858    UP000000304   

PRIDE

H9J7L2    A4V3W8    Q9U1M2   

Pfam

PF07851   TMPIT        + More
PF03073   TspO_MBR

Interpro

IPR012926   TMPIT        + More
IPR004307   TspO_MBR       
IPR038330   TspO/MBR-related_sf       

Gene 3D

1.20.1260.100    

CDD

cd15904  TSPO_MBR

ProteinModelPortal

H9J7L2   A0A2H1VHE9   A0A194PQN4   A0A194QSQ3   S4Q095   A0A1E1WNR6   + More
A0A2A4IYH0   A0A2A4IXW2   A0A2J7Q8J3   A0A067RTI7   A0A2P8YR06   A0A195AVG2   A0A158NF48   A0A195E8C6   A0A0L7R8M0   A0A0M8ZSJ5   E9ID26   A0A026W2R5   A0A088APV8   E2B080   A0A2A3EI99   D6WH93   A0A1Y1N0H1   A0A0J7KY31   A0A1Q3FYR5   A0A0T6BE85   A0A1W4X4K8   A0A023EQX9   T1DEC3   A0A0K8TQ19   A0A195C425   A0A1B6L2L4   F4WEI9   A0A1B6HS06   E0VMX0   A0A182N8F2   A0A1D2NI48   T1E212   J3JUI3   A0A182Q6N7   A0A1L8DUU0   U4UKY9   N6SZG0   Q16NV2   A0A182U4M5   A0A182XBX6   A0A182UVS2   A0A182IAK7   K7IRZ8   Q7QF35   A0A1J1I9Q1   A0A2H8TRS2   A0A336MKB9   A0A2M4CI84   A0A2M4CIU0   A0A2M3Z7B0   B4JJE2   A0A084VNX3   A0A1B0B3X0   A0A182W5L5   A0A1B6DIN6   A0A2S2NFL9   A0A1A9XVI2   A0A2M3Z7E4   A0A1B6E3Y5   T1HQX1   A0A0P4VJF3   J9JQL9   D6X2J7   A0A069DSM7   A0A1A9W971   A0A226E637   A0A1A9V0K9   A0A182M9S0   D3TNX8   A0A1B0A8G5   A0A0V0G760   A0A182FIR7   A0A2M4AD83   A0A023FAD9   A0A182RHK2   T1DUG4   B4Q0V7   A0A1W4VS75   T1PC33   A0A2M4BRU8   A0A0M4ELC3   B3NTX3   B5DM77   A0A1W4VFI4   A0A1I8MKA9   A4V3W8   Q9U1M2   A0A162DGT0   B4R3U6   A0A0A1WFG4   A0A0P4YN02  

KEGG

101736822    no KO assigned | (RefSeq) transmembrane protein 120 homolog

GO

GO:0016021   GO:0045089   GO:0050829   GO:0000166   GO:0006508   GO:0008270   GO:0031012   GO:0005089   GO:0035023   GO:0005515   GO:0016742   GO:0003824  

PANTHER

PTHR21433  

Subcellular location

Membrane  

Length:

362

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

123.88878

Exp number, first 60 AAs:

0

Total prob of N-in:

0.98920

inside

1  -  128

TMhelix

129  -  147

outside

148  -  151

TMhelix

152  -  174

inside

175  -  186

TMhelix

187  -  204

outside

205  -  213

TMhelix

214  -  231

inside

232  -  262

TMhelix

263  -  285

outside

286  -  294

TMhelix

295  -  317

inside

318  -  362

 

 

Pi

189.970302

Theta

170.702573

Tajima's D

0.578972

CLR

0.105861

CSRT

0.541422928853557

Interpretation

Uncertain