Silkworm Genome Informatics Database

Gene

KWMTBOMO04631

Pre Gene Modal

BGIBMGA005306

Annotation

PREDICTED:_sarcolemmal_membrane-associated_protein_[Papilio_machaon]

Location

Bomo_Chr8(-):11170756-11191460 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.413

CDS

ATGGTGATAGCAAAGAGTAAAAAAGTGAAACCACCAATGTACACAATTAAAAAGAATATGGATTACAACTGGACAAATGTGCCTGAACAGTCGAAAAAGCAAGATGCTGGAGTTCCAAGGGCAATCCTAACGCCTCATGCGAATTCTTTACCCTTTGAAGAACGACATGTGACAGTGGATGAAACAGTCAGAATTGGACGTAATGTCTACCGTGCAGCGGCGAGTCCTACTAACGCCATATTCGAATGTCGGGTTCTGTCGAGGCAGCATGCCACACTGTACTACGAAAAGGGACACTTTTACCTTGTGGACAACAAGAGCAGTAATGGCACTTTCATCAATAACAACCGCTGCAACGAACACGAACCGAACGAGGTGTTCTCCGGTGACGTCGTCCAGTTCGGAATACCGGTCGTCGAGAACGTTAGCAACTCTGAAAAGAATACGTTTCCACCGGTCATCGCTCATCTAAAGCTTTTTCATCCGGACGACGAGGAGGCGAAGCTTTCGTACAATCCCACCATGATCACGCCGCTGCACCTCAAGGAGTTGTACCAACTTAACAATTTCGTGCAGGAGGCGATACAACGCGAGGCGTCCCTGGAGAATCGTTTGCGCACGTTACGCGAGTGCGTGGAGCGCACGAGAGCAGAAGCGCAGGCCTCGTGGGAGTTGTTTGTGGGCGAACAACGACTTCTAATGCGGGTGCACACTCTCGAGTCCATGCTGTCTGTCGGGAAGCAACCGGACGAGCAACATCTCACGCAGCTACTCAACGACAAGAGGAACTATCAGAAAGTGGCGCAGGAAAGTCTTCGAGCGGCGCACGAGCAGCGGCTCGCGCTGGAGGAGTCGCTAGAGCGACGCAGTCGGGAGGCGGCCGCCCTGCACCACCACAACTGTGCGCTGCGACTCGCCGCCAACAACGCGCTCGCCGAGCTGCAGAAGCTGGCAGCGAGATGCGAGCGTAAGATGTGCGCGGCGCGGCTCGCCATCACAGCCGCCGAAGAACGAGAGAAAGCTGTGAGGAGCCAACTACCTCTCGCTTATTCAGTACAAAACGGCGAGACGAAGATGTTGGTGCTGAGTACGGACAGCAACAAGCTACAGGAGCCGAAACGCAGCGCCACCCTCGAGGAAGCCGTCCGGGCCCTTCCTGATTACGTCAAGATGCTGCTGCCGCAACAACTACTGAATAAGGTCGGTATAAAAATAGTCTCGGCCGACGGCAAGTCCGCTAAAGAATTCGAATTGATACTCAAGAAGAACAATGCCTATAACTCTGAAAATAAAGATACAGAAAAACTAGAAGCCGAAGAGGACGGCGTCGGTGGTAGCTGCGAAGAGAAATCCAACGAGCCTGACTCCTGTACTGACGACGAGAAACAATCCCGATTGAATCACGAACCCGGACACGAGGAGAGGTCTAGTCCGCTGGATGGTGAGCTGTGCCCAGACAACAACGCTAATTCCACATACACTGAAACTAGTAACCGAGAGGATTCGCCCATGGGTGGACGACCTCACAGCCCACCTGGTGTTAAGTGGTTACTGGAGCCCATAGACATCTACTACGTACGCCACCTACCTTGA

Protein

MVIAKSKKVKPPMYTIKKNMDYNWTNVPEQSKKQDAGVPRAILTPHANSLPFEERHVTVDETVRIGRNVYRAAASPTNAIFECRVLSRQHATLYYEKGHFYLVDNKSSNGTFINNNRCNEHEPNEVFSGDVVQFGIPVVENVSNSEKNTFPPVIAHLKLFHPDDEEAKLSYNPTMITPLHLKELYQLNNFVQEAIQREASLENRLRTLRECVERTRAEAQASWELFVGEQRLLMRVHTLESMLSVGKQPDEQHLTQLLNDKRNYQKVAQESLRAAHEQRLALEESLERRSREAAALHHHNCALRLAANNALAELQKLAARCERKMCAARLAITAAEEREKAVRSQLPLAYSVQNGETKMLVLSTDSNKLQEPKRSATLEEAVRALPDYVKMLLPQQLLNKVGIKIVSADGKSAKEFELILKKNNAYNSENKDTEKLEAEEDGVGGSCEEKSNEPDSCTDDEKQSRLNHEPGHEERSSPLDGELCPDNNANSTYTETSNREDSPMGGRPHSPPGVKWLLEPIDIYYVRHLP

Uniprot

H9J714 A0A2H1VDG5 A0A194PWV7 A0A194QY94 A0A212FK01 A0A1E1W039 + More

Pubmed

19121390 26354079 22118469

EMBL

BABH01013992 BABH01013993 BABH01013994 ODYU01001712 SOQ38294.1 KQ459595 + More
KPI95620.1 KQ461154 KPJ08546.1 AGBW02008170 OWR54075.1 GDQN01010752 JAT80302.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000007151

PRIDE

H9J714

Pfam

PF00498 FHA

Interpro

IPR008984 SMAD_FHA_dom_sf + More
IPR000253 FHA_dom

SUPFAM

SSF49879 SSF49879

CDD

cd00060 FHA

ProteinModelPortal

H9J714 A0A2H1VDG5 A0A194PWV7 A0A194QY94 A0A212FK01 A0A1E1W039 + More

PDB

6AR2 E-value=1.92216e-27, Score=306

KEGG

101737124 no KO assigned | (RefSeq) sarcolemmal membrane-associated protein

GO

GO:0016021 GO:0005515 GO:0000166 GO:0006508 GO:0008270 GO:0031012 GO:0005089 GO:0035023 GO:0016742 GO:0003824

Length:

530

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00039

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00873

outside

1 - 530

Pi

183.364556

Theta

165.668382

Tajima's D

0.449385

CLR

0.269452

CSRT

0.497025148742563

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics