SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04628
Pre Gene Modal
BGIBMGA005306
Annotation
Sarcolemmal_membrane-associated_protein_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 2.439
 

Sequence

CDS
ATGGGACTGCAGAGTAAGGCCGAAGCTGAGTACGCGAACTGCCTCCGCGTGATGGCCGGCCTCAACGGGGAGATTCGGACGTTGCGCGAACGATTGAGCGCCGCGAACGCGGAGAACGAGCAGCTGCTCGCGATTCGCGACGAGTTGCTCGCCGCGCAGCCGGAGTGCGCCGACCCGCCCGCCGACGGCGACGACGCGGCGCAGTACCGCGCGCGCGTGGCCGACCTGCAGGCTCAACTCACTCGTTCGACGGTAGCCGAAGAAGCGAACCTTGCCGAAATTCAACGTTTGGCGTCGAACGCGGCCGAGATGCAAGCCGAGCTAGCCTTCCGGCCGACGCGTTCCGACGTCGATGACTTGACCTCCGTTATTGAAAAGCTGCGTGCCGACCTTATGGTCAAGGATCAACAAATCGAGCGGCTCCTGGCGGGCGCCGACCGGGACCGGGCCGCCGCGGACAAGGCCGTCGAGACGACACGATCCCTCGAGGACCTCGGCGGGATCGACGACGACTGCGCCGACCGAAGCGTCGACGCCGGGAAGATATCCGCCGAAATCGACGAGATGTTCCGGCTCGACTTTGATGACGACGAAGATGACGAAACCGACTCGGTCGCCACCGTCGAGACGAACCGGGAGGAGGTCGGGGAGCGCACGCGGCTGTCGGACGAGCAGCGGCTGCAGGTGACGCTGCAGAACGGGAGCCTGCACGCGCTCGAGGAGGAGCTGGTGCGCGCCAAGGAGCGCTGGGCCGAGGAGAGCTGCGAGCGCGCCCGGCTGGCGGCGCAGCTGGCGGCGCTGCGCACCAAGTCTCCGCTGCAGACGCCCGTGCTGGCGCTGGTCGCCCCGCTGCTGGCCGCCGCGCTGTACTGGCTGCTGCTGCCCTACATCTCCTGA
Protein
MGLQSKAEAEYANCLRVMAGLNGEIRTLRERLSAANAENEQLLAIRDELLAAQPECADPPADGDDAAQYRARVADLQAQLTRSTVAEEANLAEIQRLASNAAEMQAELAFRPTRSDVDDLTSVIEKLRADLMVKDQQIERLLAGADRDRAAADKAVETTRSLEDLGGIDDDCADRSVDAGKISAEIDEMFRLDFDDDEDDETDSVATVETNREEVGERTRLSDEQRLQVTLQNGSLHALEEELVRAKERWAEESCERARLAAQLAALRTKSPLQTPVLALVAPLLAAALYWLLLPYIS

Summary

Pfam
PF00498   FHA
Interpro
IPR008984   SMAD_FHA_dom_sf        + More
IPR000253   FHA_dom       
SUPFAM
SSF49879   SSF49879       

Ontologies

Topology

Length:
298
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.03674
Exp number, first 60 AAs:
0.00017
Total prob of N-in:
0.15117
outside
1  -  274
TMhelix
275  -  297
inside
298  -  298
 
 

Population Genetic Test Statistics

Pi
279.378831
Theta
174.155314
Tajima's D
1.898576
CLR
0.023578
CSRT
0.867506624668767
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号