Gene

KWMTBOMO04626

Pre Gene Modal

BGIBMGA005501

Annotation

Zinc_finger_HIT_domain-containing_protein_3_[Operophtera_brumata]

Location

Bomo_Chr8(+):11076121-11079107      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.74

CDS

ATGAATTGTGGAACTTGTAGATCAGATCCTAAATATAAGTGTCCCACGTGCATGGTACCTTACTGTTCAGTCGCCTGTTATAAATTACACAAACAAAATCCTTGTATCAAACCACCGTCCCCGCCGAAACAAACAATAGGCGTAAAGCAAGCTGTTGAAAATTTATACCCTACAGAAGATACGGTACCATTGCATAGACTCAATTTATTAGAAAATTCAACAGAAGTTAAGAAATGTCTAGAAAATCCCCATGTGAGAGAAATATTAGAGCTGCTTGATTCTTCTGCAAATCCTGATGAGTTAGTTCAAGAATATATGCAAGAACCCATATTCACAGAATTTGTTGATGCATGTTTGAAAGTTGTTCAACCTCAATAA

Protein

MNCGTCRSDPKYKCPTCMVPYCSVACYKLHKQNPCIKPPSPPKQTIGVKQAVENLYPTEDTVPLHRLNLLENSTEVKKCLENPHVREILELLDSSANPDELVQEYMQEPIFTEFVDACLKVVQPQ

Uniprot

A0A2H1VWH5   A0A0L7KNB8   A0A194PS85   A0A194QTA3   A0A1E1WU62   A0A2A4IUD4   + More
A0A212FK18   S4PAQ5   A0A224XZV6   A0A067QZJ2   A0A0V0GDX5   A0A1L8DL43   A0A2J7QP24   A0A0P6AWG7   A0A0N8AMX2   A0A1L8DLE0   A0A0N0BKC7   A0A0N7Z944   R4FKQ9   A0A1Z5LDV5   A0A1W4UGP0   A0A0A9XE79   A0A1W4YEX8   A0A1W4Y5R9   A0A131YBT8   V5H7F3   D6WYY5   A0A2P8YJG1   B7PWS5   A0A182JGA0   A0A147BNH7   B4QGW9   A0A1A8KIT1   A0A2L2YD02   A0A0P7XDQ2   A0A3Q1HKG2   B4LJN8   A0A1J1J895   B4P7B1   A0A3Q2D0G2   A1ZA28   Q17N79   Q8T407   B4HS63   A0A1A8VAB4   A0A1A8GML6   A0A182WDW4   A0A336ME21   A0A1Y1LI57   A0A182LZM5   V4ATD3   A0A3B5AT28   A0A2A3E6X0   A0A1A8EFD0   A0A195FLP0   A0A1A8BAJ5   A0A023G799   Q28E80   A0A3Q2P8A2   A0A3Q1G4T1   A0A2H1C3L8   Q7ZUF9   A0A293LW06   W5JM74   A0A1I8P6Y3   A0A1A8M268   A0A1A8R6W9   A0A0Q9WCF0   A0A1A8P067   A0A088AJE6   A0A182Y9D4   B3NQA8   A0A2M3ZDT0   A2VDD7   C3KJ89   A0A1E1WZG5   G3VNC6   A0A1A7W7R5   A0A195AVS9   A0A158NEU0   A0A1A7YHJ5   A0A3Q1HS97   G1LNJ2   F1NXW8   F4WEP2   A0A151IQ10   F6ZP63   A0A0J9REN3   A0A1Q3F5C2   A0A2M3ZDQ3   Q4SLE7   A0A2M4C301   A0A336MDP9   A0A3Q3L6Q4   B4JW36   A0A0S7GF12   A0A3Q1BQ80   A0A3B3DCL5   A0A1I8NG05  

Pubmed

26227816    26354079    22118469    23622113    24845553    27129103    + More
28528879    25401762    26823975    25765539    18362917    19820115    29403074    29652888    17994087    22936249    26561354    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17510324    28004739    23254933    20431018    23594743    20920257    23761445    25244985    27762356    28503490    21709235    21347285    20010809    15592404    21719571    17495919    15496914    29451363    25315136   

EMBL

ODYU01004702    SOQ44862.1    JTDY01008636    KOB64469.1    KQ459595    KPI95614.1    + More
KQ461154    KPJ08544.1    GDQN01000504    JAT90550.1    NWSH01007927    PCG62750.1    AGBW02008170    OWR54072.1    GAIX01006282    JAA86278.1    GFTR01002246    JAW14180.1    KK853071    KDR11796.1    GECL01000079    JAP06045.1    GFDF01006891    JAV07193.1    NEVH01012097    PNF30340.1    GDIP01023388    JAM80327.1    GDIQ01260083    JAJ91641.1    GFDF01006910    JAV07174.1    KQ435701    KOX80384.1    GDKW01001579    JAI55016.1    ACPB03022764    GAHY01001738    JAA75772.1    GFJQ02001391    JAW05579.1    GBHO01025648    GBRD01017215    GDHC01018254    GDHC01011871    JAG17956.1    JAG48612.1    JAQ00375.1    JAQ06758.1    GEFM01000385    JAP75411.1    GANP01005433    JAB79035.1    KQ971363    EFA09025.1    PYGN01000552    PSN44376.1    ABJB010305582    DS809923    EEC11047.1    GEGO01003061    JAR92343.1    CM000362    CM002911    EDX07232.1    KMY94033.1    HAEE01012237    SBR32287.1    IAAA01014477    IAAA01014478    LAA06034.1    JARO02001786    KPP74439.1    CH940648    EDW60547.1    CVRI01000075    CRL08619.1    CM000158    EDW92056.1    AE013599    BT150184    AAF58118.1    AGR50378.1    CH477201    EAT48175.1    AY089409    AAL90147.1    CH480816    EDW48010.1    HAEJ01016863    SBS57320.1    HAEB01013253    HAEC01003562    SBQ71639.1    UFQT01001003    SSX28406.1    GEZM01058824    JAV71655.1    AXCM01008037    KB201263    ESO98155.1    KZ288349    PBC27458.1    HAEA01016690    SBQ45171.1    KQ981490    KYN41333.1    HADZ01000323    SBP64264.1    GBBM01006663    JAC28755.1    AAMC01017935    BC121593    BC157154    CR848407    AAI21594.1    AAI57155.1    CAJ82353.1    KZ431291    PIS82060.1    CU655870    CU856360    BC049063    AAH49063.1    GFWV01007291    MAA32021.1    ADMH02000720    ETN65251.1    HAEF01010678    SBR50853.1    HAEH01015066    SBS01746.1    KRF79473.1    HAEI01001036    SBR74402.1    CH954179    EDV55884.1    GGFM01005902    MBW26653.1    BC129774    CM004468    AAI29775.1    OCT94558.1    BT083004    ACQ58711.1    GFAC01006789    JAT92399.1    AEFK01161635    AEFK01161636    HADW01000513    SBP01913.1    KQ976736    KYM76074.1    ADTU01013692    HADX01007810    SBP30042.1    ACTA01104540    ACTA01112540    AADN05000057    GL888103    EGI67405.1    KQ976806    KYN08210.1    KMY94034.1    KMY94035.1    GFDL01012342    JAV22703.1    GGFM01005888    MBW26639.1    CAAE01014557    CAF98535.1    GGFJ01010247    MBW59388.1    UFQS01000759    UFQT01000759    SSX06693.1    SSX27039.1    CH916375    EDV98174.1    GBYX01456635    JAO24906.1   

Proteomes

UP000037510    UP000053268    UP000053240    UP000218220    UP000007151    UP000027135    + More
UP000235965    UP000053105    UP000015103    UP000192221    UP000192224    UP000007266    UP000245037    UP000001555    UP000075880    UP000000304    UP000034805    UP000265040    UP000008792    UP000183832    UP000002282    UP000265020    UP000000803    UP000008820    UP000001292    UP000075920    UP000075883    UP000030746    UP000261400    UP000242457    UP000078541    UP000008143    UP000265000    UP000257200    UP000000437    UP000000673    UP000095300    UP000005203    UP000076408    UP000008711    UP000186698    UP000007648    UP000078540    UP000005205    UP000008912    UP000000539    UP000007755    UP000078542    UP000002280    UP000007303    UP000261640    UP000001070    UP000257160    UP000261560    UP000095301   

PRIDE

A1ZA28    Q8T407   

Pfam

PF04438   zf-HIT

Interpro

IPR007529   Znf_HIT        + More
IPR040197   ZNHIT3       
IPR013087   Znf_C2H2_type       

ProteinModelPortal

A0A2H1VWH5   A0A0L7KNB8   A0A194PS85   A0A194QTA3   A0A1E1WU62   A0A2A4IUD4   + More
A0A212FK18   S4PAQ5   A0A224XZV6   A0A067QZJ2   A0A0V0GDX5   A0A1L8DL43   A0A2J7QP24   A0A0P6AWG7   A0A0N8AMX2   A0A1L8DLE0   A0A0N0BKC7   A0A0N7Z944   R4FKQ9   A0A1Z5LDV5   A0A1W4UGP0   A0A0A9XE79   A0A1W4YEX8   A0A1W4Y5R9   A0A131YBT8   V5H7F3   D6WYY5   A0A2P8YJG1   B7PWS5   A0A182JGA0   A0A147BNH7   B4QGW9   A0A1A8KIT1   A0A2L2YD02   A0A0P7XDQ2   A0A3Q1HKG2   B4LJN8   A0A1J1J895   B4P7B1   A0A3Q2D0G2   A1ZA28   Q17N79   Q8T407   B4HS63   A0A1A8VAB4   A0A1A8GML6   A0A182WDW4   A0A336ME21   A0A1Y1LI57   A0A182LZM5   V4ATD3   A0A3B5AT28   A0A2A3E6X0   A0A1A8EFD0   A0A195FLP0   A0A1A8BAJ5   A0A023G799   Q28E80   A0A3Q2P8A2   A0A3Q1G4T1   A0A2H1C3L8   Q7ZUF9   A0A293LW06   W5JM74   A0A1I8P6Y3   A0A1A8M268   A0A1A8R6W9   A0A0Q9WCF0   A0A1A8P067   A0A088AJE6   A0A182Y9D4   B3NQA8   A0A2M3ZDT0   A2VDD7   C3KJ89   A0A1E1WZG5   G3VNC6   A0A1A7W7R5   A0A195AVS9   A0A158NEU0   A0A1A7YHJ5   A0A3Q1HS97   G1LNJ2   F1NXW8   F4WEP2   A0A151IQ10   F6ZP63   A0A0J9REN3   A0A1Q3F5C2   A0A2M3ZDQ3   Q4SLE7   A0A2M4C301   A0A336MDP9   A0A3Q3L6Q4   B4JW36   A0A0S7GF12   A0A3Q1BQ80   A0A3B3DCL5   A0A1I8NG05  

PDB

5L85     E-value=4.43425e-09,     Score=139

KEGG

101736459    K23309 zinc finger HIT domain-containing protein 3 | (RefSeq) zinc finger HIT domain-containing prot

GO

GO:0046872   GO:0021549   GO:0070761   GO:0000492   GO:0005634   GO:0048254   GO:0000463   GO:0003676   GO:0005737  

PANTHER

PTHR13483:SF11  

Length:

125

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00037

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.36057

outside

1  -  125

 

 

Pi

203.980226

Theta

43.207905

Tajima's D

0.46823

CLR

0

CSRT

0.501974901254937

Interpretation

Uncertain