Silkworm Genome Informatics Database

Gene

KWMTBOMO04623

Pre Gene Modal

BGIBMGA005310

Annotation

PREDICTED:_matrix_metalloproteinase-14-like_[Plutella_xylostella]

Location

Bomo_Chr8(-):10779454-10790796 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.46 Nuclear Reliability : 1.352

CDS

ATGTTTTTGTCATCGACGCGTCGTCCTTCTCTACTGGACCCGTACGAGACACGCAGCGTGTTGGCACGCGCCCTCGACGTTTGGGAACAAGCCTCCCGACTTACTTTCACAGAAGTAAATTCGGAAGAGGCCGATATCCTTGTCTCGTTCGCCAAACGTTACCATGACGATGCATATCCATTCGATGGACGAGGTACGATTCTAGCTCACGCTTTCTTTCCTGGCGTGGACCGCGGTGGTGACGCGCACTTTGATGATGACGAACTCTGGTTGTTAGAGCCCAAAGATGACGATGAAGAAGGCACATCACTTTTTGCTGTTGCTGTTCACGAGTTTGGACATTCGTTAGGACTTAGCCACAGTAGTGTAAAAGGCGCACTGATGTACCCTTGGTATCAGGGTATTCAATCTAACTTTGTATTACCTGAAGATGATCGTAATGGCATTCAACAAATGTATGGTCCAAAATTAAACAATAAGAAATGGGCAAGAATCCCTTCATACAAACCAGTTCAAACACCACCAACAACCACTACGACTACCACTACGACCACAACAACCAGAAGGCCTTATATCCACCATAATAGACATCATGGAGTTCCGAACATGCCCCGTGATCCATCTAGAAACCCAGTTTACTACCCGAGAAGACCTTATTACCCTGATCGTCATTACCACAATACAACCGAAGATCATCCACGCAGAACGAATTACAATTACCCTCGAATTGAGACTACCACGCACGCAATAACTTACCGCCCCCGATACCCCTATAAACCGGAGTATCCCAGCTACCCAAGACCAAACTATCCGGTCGATCCTAGGCAAGATTACCCTAAGCAGGACTACCCTAGATCAGATTATCCTAAGCGACCATACTATCCAGAGAAAACTACCACTACTACTCAAAGGCCCACGCCGCCACAAAGGCCGACTCCAACTTCACCATCGGATAAACCAAATACGTGTGATACAAATTACGACGCTGTCGCTTTAATACGTGGCGAACTCTTCATATTCAAAGACAGGTATCACTGGAGGATCGGAGCTCACGGTCGATATCCTGGTTACCCAATGGAAATAACTAGAATGTGGTCCAGTTTACCAAAAAATCTAACACACGTGGACGCTGTTTATGAAAGACCAGATAAACATATTGCTATCTTTATAGGAAAGGAGTTGTATTTGTTCAATTCACAATATTTATTGCCCGGCTATCCGAAACCTTTGACCAAACTGGGTTTACCTGAAACTTTGGAGAAATTGGACGCGGCAATGGTTTGGAGTCTCAATGGCAAAACTTACTTTTACAGTGGAACTATGTATTGGAAATATGATGAAGACGAAGGAAAAGTAGAACTGGACTATCCCCGTAATATGGCCATGTGGAAGGGGGTTGGATACAACATCGATAGTGTTTTCCAATGGAAAGACGGGAACACCTATTTCTTCAAAGGAAAAGGATATTGGAAATTCAACGACCTGCAAATGCGAGTGGAGCACGAACAACAACTTCCGTCAGCCCCGTTCTGGATGGGTTGTCCTGGAGAGAGAAGCGGTCGAAAATATCCTTATCGCGCTCCTGCAGCACCAGGATCTACTTTACGATCGCCGAGTTCATCATCAACGCTACATTTAACTAACTTAATCGCACTTATCTCTTCTCTAGTTATTTCGCTCAATATGTCTTTACAATTTTACTGA

Protein

MFLSSTRRPSLLDPYETRSVLARALDVWEQASRLTFTEVNSEEADILVSFAKRYHDDAYPFDGRGTILAHAFFPGVDRGGDAHFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVKGALMYPWYQGIQSNFVLPEDDRNGIQQMYGPKLNNKKWARIPSYKPVQTPPTTTTTTTTTTTTRRPYIHHNRHHGVPNMPRDPSRNPVYYPRRPYYPDRHYHNTTEDHPRRTNYNYPRIETTTHAITYRPRYPYKPEYPSYPRPNYPVDPRQDYPKQDYPRSDYPKRPYYPEKTTTTTQRPTPPQRPTPTSPSDKPNTCDTNYDAVALIRGELFIFKDRYHWRIGAHGRYPGYPMEITRMWSSLPKNLTHVDAVYERPDKHIAIFIGKELYLFNSQYLLPGYPKPLTKLGLPETLEKLDAAMVWSLNGKTYFYSGTMYWKYDEDEGKVELDYPRNMAMWKGVGYNIDSVFQWKDGNTYFFKGKGYWKFNDLQMRVEHEQQLPSAPFWMGCPGERSGRKYPYRAPAAPGSTLRSPSSSSTLHLTNLIALISSLVISLNMSLQFY

Cofactor

Zn(2+)

Similarity

Belongs to the peptidase M10A family.

Uniprot

H9J718 A0A2H1VCC6 A0A2A4IW44 A0A212EYT8 A0A0L7LSZ0

Pubmed

19121390 22118469 26227816

EMBL

BABH01013970 ODYU01001602 SOQ38052.1 NWSH01006064 PCG63696.1 AGBW02011442 + More
OWR46652.1 JTDY01000150 KOB78583.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000037510

PRIDE

H9J718

Pfam

PF00045 Hemopexin + More
PF00413 Peptidase_M10

Interpro

IPR000585   Hemopexin-like_dom        + More
IPR018487   Hemopexin-like_repeat
IPR006026   Peptidase_Metallo
IPR001818   Pept_M10_metallopeptidase
IPR024079   MetalloPept_cat_dom_sf
IPR036375   Hemopexin-like_dom_sf
IPR021190   Pept_M10A
IPR033739   M10A_MMP

SUPFAM

SSF50923 SSF50923

Gene 3D

2.110.10.10 3.40.390.10

CDD

cd00094 HX
cd04278 ZnMc_MMP

ProteinModelPortal

H9J718 A0A2H1VCC6 A0A2A4IW44 A0A212EYT8 A0A0L7LSZ0

PDB

6CM1 E-value=8.53312e-39, Score=404

KEGG

101736589 K08002 matrix metalloproteinase-24 (membrane-inserted) [EC:3.4.24.-] | (RefSeq) matrix metalloprotei

GO

GO:0031012 GO:0004222 GO:0008270 GO:0016021 GO:0008237 GO:0006508 GO:0005089 GO:0035023 GO:0005515 GO:0016742 GO:0003824

Length:

567

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.87145

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00223

outside

1 - 567

Pi

163.796281

Theta

175.261382

Tajima's D

-0.364083

CLR

0.373427

CSRT

0.273286335683216

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics