SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04622
Annotation
PREDICTED:_cytochrome_c_oxidase_assembly_protein_COX19_[Amyelois_transitella]
Full name
Cytochrome c oxidase assembly protein COX19      
Location in the cell
Nuclear   Reliability : 2.363
 

Sequence

CDS
ATGTCAACTGCTATGACTTTCGGCCAGAAACAATTTATTCCAACTCCACCAGATAAGGGAAGTTTTCCCTTGGATCACGAAGGAATTTGCAAGAAAACTATGGTTCGCTACATGAAATGTTTGATTAATAACAATAGCAATAACTCATTATGTCGTGATGAAGCTAAGGAATATTTGGCATGTAGAATGGAGAATAATTTAATGGCTAAAGAAGACTGGAATAATTTAGGTTTTCAAGAAAATAAAGAAGAGCGATAG
Protein
MSTAMTFGQKQFIPTPPDKGSFPLDHEGICKKTMVRYMKCLINNNSNNSLCRDEAKEYLACRMENNLMAKEDWNNLGFQENKEER

Summary

Description
Required for the transduction of an SCO1-dependent redox signal from the mitochondrion to ATP7A to regulate cellular copper homeostasis. May be required for the assembly of mitochondrial cytochrome c oxidase (By similarity).
Subunit
Interacts with CHCHD4/MIA40 forming transient intermolecular disulfide bridges.
Similarity
Belongs to the COX19 family.
Keywords
Acetylation   Complete proteome   Cytoplasm   Disulfide bond   Mitochondrion   Reference proteome  
Feature
chain  Cytochrome c oxidase assembly protein COX19
EMBL
KQ459595    KPI95610.1    JTDY01000150    KOB78585.1    GAIX01011503    JAA81057.1    + More
ODYU01000113    SOQ34339.1    AGBW02011442    OWR46651.1    PYGN01000552    PSN44384.1    GFDF01001961    JAV12123.1    GFDF01001962    JAV12122.1    KZ288254    PBC30708.1    JR042889    AEY59683.1    KQ435763    KOX75400.1    KK853297    KDR08782.1    KK107455    QOIP01000010    EZA50517.1    RLU17363.1    GL888103    EGI67412.1    KQ976806    KYN08202.1    GFDL01007357    JAV27688.1    KQ981490    KYN41325.1    APGK01026886    KB740648    ENN79716.1    CH477861    CH477658    EAT35536.1    EAT37681.1    EAT37683.1    KQ979479    KYN21300.1    GL448228    EFN85107.1    GFDL01007114    JAV27931.1    GAPW01006627    JAC06971.1    GAPW01006626    JAC06972.1    GFDL01007236    JAV27809.1    KQ414668    KOC64598.1    JXUM01072257    KQ562711    KXJ75283.1    KK120053    KFM77414.1    GL436210    EFN72272.1    DS234212    EDS33256.1    ADTU01013669    KQ434988    KZC13165.1    NNAY01000055    OXU31488.1    CAQQ02172840    GFDL01007203    JAV27842.1    GFDL01006953    JAV28092.1    CH963850    KRF98164.1    CM000071    EDY69355.1    CH479183    EDW35939.1    CP012524    ALC41038.1    ATLV01020327    KE525298    KFB45085.1    GANP01000196    JAB84272.1    LBMM01000896    KMQ97258.1    GGFJ01011000    MBW60141.1    CH954179    EDV55499.1    CH480824    EDW56673.1    CM000362    CH989425    CM002911    EDX08115.1    EDX16166.1    KMY95628.1    CM000158    EDW91200.1    AE013599    AY102691    ACZ94515.1    AGK45256.1    GAMD01002800    JAA98790.1    GGFM01005608    MBW26359.1    GGFK01012767    MBW46088.1    GGFJ01011169    MBW60310.1    UFQS01001716    UFQT01001716    SSX11950.1    SSX31497.1    GGFK01012768    MBW46089.1    UFQS01000062    UFQT01000062    SSW98815.1    SSX19201.1    CH902619    EDV37058.1    AXCM01001643    MWRG01003010    PRD31966.1    GGFL01005908    MBW70086.1    GGFL01005907    MBW70085.1    AAMC01119007    ADMH02000674    ETN65374.1    KQ416499    KOF96738.1    NCKU01000294    RWS16116.1    NOWV01000205    RDD37938.1    DS985284    EDV19137.1    JH429957    AEMK02000013    AAKN02032234    AC127903    CH474012    EDL89773.1    BC134520    AGTP01103410    GEBF01004792    JAN98840.1    JXLN01015946    KPM10877.1    GFFV01004856    JAV35089.1    CM004483    OCT61553.1    MTYJ01000004    OQV24915.1   
Pfam
PF06747   CHCH        + More
PF02441   Flavoprotein
PF05676   NDUF_B7
PF18036   Ubiquitin_4
PF07896   DUF1674
Interpro
IPR010625   CHCH        + More
IPR009069   Cys_alpha_HP_mot_SF       
IPR036551   Flavin_trans-like       
IPR003382   Flavoprotein       
IPR008698   NADH_UbQ_OxRdtase_B18_su       
IPR040610   SNRNP25_ubiquitin       
IPR012875   SDHF4       
IPR029071   Ubiquitin-like_domsf       
IPR039690   SNRNP25       
SUPFAM
SSF47072   SSF47072        + More
SSF52507   SSF52507       
SSF54236   SSF54236       
Gene 3D

Ontologies

Topology

Subcellular location
Cytoplasm   Partitions between mitochondria and the cytosol in a copper-dependent manner. Enriched in the cytosol when intracellular copper concentrations are elevated.   With evidence from 2 publications.
Cytosol   Partitions between mitochondria and the cytosol in a copper-dependent manner. Enriched in the cytosol when intracellular copper concentrations are elevated.   With evidence from 2 publications.
Mitochondrion intermembrane space   Partitions between mitochondria and the cytosol in a copper-dependent manner. Enriched in the cytosol when intracellular copper concentrations are elevated.   With evidence from 2 publications.
Mitochondrion   Partitions between mitochondria and the cytosol in a copper-dependent manner. Enriched in the cytosol when intracellular copper concentrations are elevated.   With evidence from 2 publications.
Length:
85
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.40088
outside
1  -  85
 
 

Population Genetic Test Statistics

Pi
211.592056
Theta
221.942175
Tajima's D
-0.1295
CLR
0
CSRT
0.332083395830209
Interpretation
Uncertain
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