Gene

KWMTBOMO04615  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005498

Annotation

PREDICTED:_something_about_silencing_protein_10-like_[Amyelois_transitella]

Location

Bomo_Chr8(+):10736627-10739651      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.572

CDS

ATGGCTGATAAAATAAGAATAAATTCAAGATTTGACCAAAAAGAGAATTATGCCCCTTCAGATTCAGAAGATGGTTATTCTGAAAATGAAAAGCGATTATTGGATAAAGTACGTAAGAGAAAACATGAGTCTGATAGTGAAGAGGAAATGTATGCTTTCTCTGATTCTGACGAGGAATCAGATCAAAAGGATGATTTGGGAATAGCAGACAGTGATGTTGAAGGACAGGAAAAATCAGACGATGACTTACCTGATTCAAAAGCTTGGGGCAAAAATAAACAATCATACTATGCCACTGATTATGTTGACAAAGATTATGGAGGCTTCGGTGATGATGAAGAAGCTGCTCTTATGGAAGAAGAGGAGGCTAAGAATATTCAGAAGAGATTGCTAGAACAACTTGGAGATGAAGATTTTACCTTGGATTTCTTTACTAAACATGTACAAGACGCTGAAGAAAGAGAAACAGTAATAAAAAGTGATTTGAGCCAGTTGTCAAAAAGACAAAAGCTACAATTGTTTGAAAAGGAAAGTCCTGAGTTTTCAGGTCTTGTTGATGACTTCCAAACAAAACTTACTGTAGCTAAAGATAACCTACATCCAGTCTTGGAATTAGTAAAAGATGGCAAATTACCAAAATGTGCAGCATCAAAGTTTGTAAAAACAAACTATGATCTAATTCTAAATTATTGTACAAATATTAGTTTTTATTTGCTTCTAAAGAGTCAGCGAGTAAACATTCAAAATCATCCAGTTATAAAAAGGTTGTATCAGTACAGACAAATGTTGAATAAAATGGAACCGATATATTTGGAAGTAATTAAACCGCAAATAGATAAAATTCTTCTGGCTGTGAAGAACAACCTTGTTTTGGAAGTAAATGAACAAAAAGAAGCTAAGAAACGCAAGTTAGAAAAACTTATTTCAGAATCAACTCCCAAGAAATTGAAACTTATCAGTGCAATAGAAAAAGATGAAGGAGAAGACACTGGAGTATCTGATGATGAAGAATATGAAGGGAATGATTACTTTAAAGATAACGATAAAGTTGAAAATGTGCCAAGAAGTAATGAATCTGAAGAAAGTGGTTTTTCAGATAATGAAGATACTGTACTTGGTGAAACAGAAGTTGACCATAATAAACCATCAACATCATCTCAACAAATTGTTACAGAAGATCTTGGAATGAAAAGAGAAATAACATATCAAATTGCAAAGAATAAAGGGTTGACACCCCATCGAAAGAAAGATCAAAGAAACCCAAGAGTCAAACATAAACTTAAATACAGAAAGGCTAAAATCAGAAGGAAGGGTGCAGTGAGGGAACCTAAGACAGAAGTGTCCAGATATGGTGGTGAATCATCAGGCATAAAAGCAAATTTGAAAAAGAGCATAACAATCAAGTAA

Protein

MADKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFSDSDEESDQKDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGDDEEAALMEEEEAKNIQKRLLEQLGDEDFTLDFFTKHVQDAEERETVIKSDLSQLSKRQKLQLFEKESPEFSGLVDDFQTKLTVAKDNLHPVLELVKDGKLPKCAASKFVKTNYDLILNYCTNISFYLLLKSQRVNIQNHPVIKRLYQYRQMLNKMEPIYLEVIKPQIDKILLAVKNNLVLEVNEQKEAKKRKLEKLISESTPKKLKLISAIEKDEGEDTGVSDDEEYEGNDYFKDNDKVENVPRSNESEESGFSDNEDTVLGETEVDHNKPSTSSQQIVTEDLGMKREITYQIAKNKGLTPHRKKDQRNPRVKHKLKYRKAKIRRKGAVREPKTEVSRYGGESSGIKANLKKSITIK

Uniprot

H9J7K6   A0A1E1VZV1   A0A2H1V0G0   A0A0L7KYY1   A0A194QU72   A0A194PQ85   + More
A0A212EYX1   D2A199   A0A067QV45   A0A0T6AUD8   A0A2J7QKN1   A0A232EQI2   K7J7M2   A0A0L7RDC9   A0A1B6GCQ4   A0A1B6IZ76   A0A088ART1   A0A2A3E2F0   A0A0M8ZPX1   A0A2J7QKM7   A0A1I8P5T7   A0A1J1J4H9   A0A336MZR0   A0A336L112   W8BSG4   A0A1B6CGF7   A0A1B0G0S7   B7Q4P6   D3TNZ4   A0A0P5WSW8   A0A131XMB8   J9K8I1   A0A0P5WSC6   A0A0K8RBJ7   B4L7T1   A0A0P5B111   A0A1Q3F2W3   A0A0N8CS31   A0A0N8A2K1   A0A0P6GK81   A0A0P5VEF7   A0A3B0KRK4   A0A0P5STV4   A0A0P6FQP2   A0A0P5V7V0   A0A0P5U2Y2   A0A0P5YA89   A0A0K8RCL5   A0A131XZJ2   A0A1Q3F4L2   A0A0N8DBN2   A0A0L0CDW2   A0A1E1XSY4   A0A1E1XB62   E2BX52   A0A210PWI1   A0A3Q3MQ81   A0A146ZW45   A0A3B4UNZ3   A0A3Q1BE58   A0A2R5L8N4   A0A0P5DXE6   W5LZV8   A0A3Q2QW53   A0A0P5CJE3   A0A3B1IT18   G1SYC5   M7BPN6   A0A3P8S1P1   A0A3P9NDY9   A0A3Q1FGR1   A0A1W4XYH1   A0A1S3P2I1   A0A2K5E3C2   A0A2Y9DZ79   A0A3Q2ZRN0   K7EWE5   A0A3B3XNQ3   A0A2K5RKQ3   A0A0P5WTD4   A0A3P9AMF0   A0A3Q2CW15   A0A158NHK4   A0A2K6SEX0   W5LZX7   A0A1S3P289   A0A293MXF1   F6QJZ7   H0X7X6   A0A0N8CYE3   G1KMV7   A0A1S3FII0   W5PD55   A0A1A8JWR1   A0A3B3CSB4   A0A1A8D4D6   K1PNZ4  

Pubmed

19121390    26227816    26354079    22118469    18362917    19820115    + More
24845553    28648823    20075255    24495485    20353571    28049606    17994087    26108605    29209593    28503490    20798317    28812685    25329095    21993624    23624526    17381049    25069045    21347285    19892987    20809919    29451363    22992520   

EMBL

BABH01013962    BABH01013963    GDQN01010840    JAT80214.1    ODYU01000113    SOQ34335.1    + More
JTDY01004221    KOB68437.1    KQ461154    KPJ08535.1    KQ459595    KPI95606.1    AGBW02011442    OWR46647.1    KQ971338    EFA01562.1    KK852902    KDR14064.1    LJIG01022784    KRT78737.1    NEVH01013262    PNF29141.1    NNAY01002764    OXU20615.1    AAZX01002179    KQ414614    KOC68829.1    GECZ01009547    JAS60222.1    GECU01015490    JAS92216.1    KZ288427    PBC25877.1    KQ438551    KOX67169.1    PNF29142.1    CVRI01000070    CRL07304.1    UFQS01002855    UFQT01002855    SSX14771.1    SSX34163.1    UFQS01001439    UFQT01001439    SSX10906.1    SSX30584.1    GAMC01004475    GAMC01004473    JAC02083.1    GEDC01024883    JAS12415.1    CCAG010004515    ABJB010027122    ABJB010110019    ABJB010371168    ABJB010666651    ABJB011072904    DS857337    EEC13817.1    EZ423146    ADD19422.1    GDIP01082088    JAM21627.1    GEFH01001715    JAP66866.1    ABLF02035529    GDIP01082090    JAM21625.1    GADI01005595    JAA68213.1    CH933814    EDW05506.1    GDIP01191331    JAJ32071.1    GFDL01013151    JAV21894.1    GDIP01104399    JAL99315.1    GDIP01188729    JAJ34673.1    GDIQ01042563    JAN52174.1    GDIP01101446    JAM02269.1    OUUW01000019    SPP89279.1    GDIP01191332    GDIP01135353    LRGB01003146    JAL68361.1    KZS04022.1    GDIQ01055656    JAN39081.1    GDIP01104400    JAL99314.1    GDIP01118898    JAL84816.1    GDIP01060648    JAM43067.1    GADI01005594    JAA68214.1    GEFM01003143    JAP72653.1    GFDL01012539    JAV22506.1    GDIP01049591    JAM54124.1    JRES01000523    KNC30435.1    GFAA01001016    JAU02419.1    GFAC01002708    JAT96480.1    GL451202    EFN79771.1    NEDP02005443    OWF40834.1    GCES01015782    JAR70541.1    GGLE01001651    MBY05777.1    GDIP01151192    JAJ72210.1    AHAT01034526    AHAT01034527    AHAT01034528    AHAT01034529    AHAT01034530    AHAT01034531    AHAT01034532    AHAT01034533    AHAT01034534    AHAT01034535    GDIP01169626    JAJ53776.1    AAGW02023094    KB551681    EMP30137.1    AGCU01157539    GDIP01082089    JAM21626.1    ADTU01015877    GFWV01019860    MAA44588.1    AAQR03168010    GDIP01086703    GDIQ01055657    JAM17012.1    JAN39080.1    AMGL01099452    HAEE01003804    SBR23824.1    HADZ01022152    HAEA01002906    SBP86093.1    JH815775    EKC18200.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000007151    UP000007266    + More
UP000027135    UP000235965    UP000215335    UP000002358    UP000053825    UP000005203    UP000242457    UP000053105    UP000095300    UP000183832    UP000092444    UP000001555    UP000007819    UP000009192    UP000268350    UP000076858    UP000037069    UP000008237    UP000242188    UP000261640    UP000261420    UP000257160    UP000018468    UP000265000    UP000018467    UP000001811    UP000031443    UP000265080    UP000242638    UP000257200    UP000192224    UP000087266    UP000233020    UP000248480    UP000264800    UP000007267    UP000261480    UP000233040    UP000265140    UP000265020    UP000005205    UP000233220    UP000002281    UP000005225    UP000001646    UP000081671    UP000002356    UP000261560    UP000005408   

PRIDE

H9J7K6   

Pfam

PF09368   Sas10        + More
PF04000   Sas10_Utp3

Interpro

IPR007146   Sas10/Utp3/C1D        + More
IPR018972   Sas10_C_dom       

ProteinModelPortal

H9J7K6   A0A1E1VZV1   A0A2H1V0G0   A0A0L7KYY1   A0A194QU72   A0A194PQ85   + More
A0A212EYX1   D2A199   A0A067QV45   A0A0T6AUD8   A0A2J7QKN1   A0A232EQI2   K7J7M2   A0A0L7RDC9   A0A1B6GCQ4   A0A1B6IZ76   A0A088ART1   A0A2A3E2F0   A0A0M8ZPX1   A0A2J7QKM7   A0A1I8P5T7   A0A1J1J4H9   A0A336MZR0   A0A336L112   W8BSG4   A0A1B6CGF7   A0A1B0G0S7   B7Q4P6   D3TNZ4   A0A0P5WSW8   A0A131XMB8   J9K8I1   A0A0P5WSC6   A0A0K8RBJ7   B4L7T1   A0A0P5B111   A0A1Q3F2W3   A0A0N8CS31   A0A0N8A2K1   A0A0P6GK81   A0A0P5VEF7   A0A3B0KRK4   A0A0P5STV4   A0A0P6FQP2   A0A0P5V7V0   A0A0P5U2Y2   A0A0P5YA89   A0A0K8RCL5   A0A131XZJ2   A0A1Q3F4L2   A0A0N8DBN2   A0A0L0CDW2   A0A1E1XSY4   A0A1E1XB62   E2BX52   A0A210PWI1   A0A3Q3MQ81   A0A146ZW45   A0A3B4UNZ3   A0A3Q1BE58   A0A2R5L8N4   A0A0P5DXE6   W5LZV8   A0A3Q2QW53   A0A0P5CJE3   A0A3B1IT18   G1SYC5   M7BPN6   A0A3P8S1P1   A0A3P9NDY9   A0A3Q1FGR1   A0A1W4XYH1   A0A1S3P2I1   A0A2K5E3C2   A0A2Y9DZ79   A0A3Q2ZRN0   K7EWE5   A0A3B3XNQ3   A0A2K5RKQ3   A0A0P5WTD4   A0A3P9AMF0   A0A3Q2CW15   A0A158NHK4   A0A2K6SEX0   W5LZX7   A0A1S3P289   A0A293MXF1   F6QJZ7   H0X7X6   A0A0N8CYE3   G1KMV7   A0A1S3FII0   W5PD55   A0A1A8JWR1   A0A3B3CSB4   A0A1A8D4D6   K1PNZ4  

PDB

5OQL     E-value=1.20034e-08,     Score=143

KEGG

101735572    K14767 U3 small nucleolar RNA-associated protein 3 | (RefSeq) something about silencing protein 10

GO

GO:0005730   GO:0000462   GO:0032040   GO:0007420  

Length:

468

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03942

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02664

outside

1  -  468

 

 

Pi

160.041339

Theta

186.503217

Tajima's D

-0.505629

CLR

0.43558

CSRT

0.23908804559772

Interpretation

Uncertain