SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04613
Pre Gene Modal
BGIBMGA005497
Annotation
PREDICTED:_active_breakpoint_cluster_region-related_protein_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.149
 

Sequence

CDS
ATGAGTGTATACGGGGATTTTCAACGTGTTTGGGTCCAACGTTTTCCAGAAAGCGCTTTGCCAGCGGCCTGGGAGGAAGATGTCAGGGCTAATCTAGCTAAACACAAACAGAAAGTTGCTATTTTAAGGGAGGAATTAGAAAAAGAAGAATTTTACGTTGAATACTTAGAGACACTTTTATCAGATGTCGAGAAACATAAGGCTGCATCACAGGATAACAAAACGACTCCGCCCTCGGGGTCTGACGTGAACGAACTCGATGATAAGGTTTCCGAAATAAAGCAGGTTTCAAAAACTGATTCGTTATCGAAAAAAAGCGATTTGAGCTTAAATAGTAATAATGACAATTCTATTGAGGAAGTCATTTGTGAGGAGGTGCAGCTTAGAAATAAACAAATGCACATCGCTGAGAGAAGTTCAGTCAATCAGTGCATTAATGAATTATCGTCAAACCTCGTAGCAACCGAAGCGGCTCGTCGACGATGTAATAGTGAGATTGTACACAGAACTGAAAATAATCAAGACAAAGTAGCTGTAGATCAAACAAGTCATAGTCAAAGTAAAAACCGTCCAACGTCACAAACTGGTGATTTCGTAACCGTCATCGAAGTAAATGGTCTGAAATTAGCAGAAAATGCATCTAAGAAATCGGAAGAATCGCCCCAGTCTTCAGAGAGTAGTCCCGTAGATCCTGTTTCTGTCGCCAAGAAAAAAGTACCACCTAAACCTCCACCGAAAGTGTTCAGCAAACGCGGAGTTTCACTGCCAGAGTCTGCTGGGGTTGACGACAGTCCGCCCTCATCACTCGGCCGGAAGATACGCAACGCGGAATCCCGAGAGTCTATTGCAAGTCGAGCATCGACACCATCAATTAGCGAAAGGGTAAAAAGTTATGAATCAATCAATTCATTATCATCGGAACGTAAACGTTCTGGTGGCGCCGCAACCCCGAGGTCTATCGACGAAGAGGTGACATCGACGACTCCTGATTTGCCCGAAGGAACGGATGCGGACAAATCCGCCCCGCTGTCCTTGGAAAGTATACCCGCATCCGTACCCATTGCTGAAGATGAACCATATTACGACCAAGTGCCCACCGACGCCAACGATGGAGAATACGTGTACATACAAGCAGGCGGCACCGGGTCGAGTGCGGAGGAAGGACCGAGCTCGCAGCCGACGCCGTCCGCGCCGCCCGCGCCGCGCCTCGACTCACCGACCTGCACCATCGCACCGAACTACGTTAACATACATTATTTTATACAGCAAGCAGCTGATGCTGCAGAAATGTCTGAGGGAGTCACGGATATGGCTGATTCGAGTGATACTCCTCTTCTACTCAGAACGATATCATCTGATAATGAAACCAATGCAACACCTCCATCGTTAAGGAAATTACAAACCCAGGAATCCAATATCAGTAACAATGCTGAAGCGGAACGTCTTACGATGCACCGTTGTATTATCACAAGTATTATTGAAAGCGAAACTGTTTATGTGGAATGTCTCTACGTCATGGAAAAGTACATGAACGCTATAAAAGCGACATTGTCTACGTCACAACCAGTTATAACGGAAGAGGAATTTAATACGATATTTTACAAAATATCAGAGCTTCATGAGTTACATAAAAGTTTTCTTGAAGGCTTAAAAGCGGCTGTGGCCAGTTGGGAAGAGCCTCTATCAGTAGGGACCCATTTTAAGAAGATGGCGGAAAACATAAACGTGTACGGTGCATTTCTGCACAACTACGGTCGAGCGACGGACGCGGTGCGGCGACGCTGCGCCACGTCACAGAACTTCGCGCACCTCACGAAGCAGATCTCGTGTCACGGGCAGCCGATGTCGCTCGACGACCTGCTGCACAAGCCCGTTGCTAGGGTGCAAAAAAACGCGCTAGTTCTACACGATCTTATAAAATACACGCCAGCAAGTCACCCTGATCATGCCATGTTGACGGATGCTCTGAACATGACACAGCATTTCTTAGACGAATTCAATATCATACAGACTAAATCCATGTTCCCTAATGCAGATAGAGCGCAGAGAAGACTGGTCAAGAATTCATTTATTGTCGAACTGTCAGATGGTCACAGAAAATTAAGACATTTGTTTCTGTTCAACGATGTCATAGCATGTGCCAAATACAAGGCGTCCGGCCGCGATAAGTTCACATTCGAGTTGAAATGGTTCATCCCGCTCCCCGACATCGTGGTCGTAGACGAGGACAGCGCGGGAGCCGGCGCGGTGGAGGCCCGCGAGACCTCGCCCGCTAACATAGTGGCGCTCAAGTCGCAAGCCTCCACTGTACGGGACCAAATACTCGCGGAAGAGCGGGCTGCCACCGATGACAAGAAAATAAGACTGGGAAGTAGAGGCGCGGCGGAGAAACAACGCAAGAAACTAGCAGAACTGGAGGGGCAGTTGGTGCTAGCGTCACCCAACCTGGTGTTCAGGGTAGGGGCCCGCGCTCCCGGGGCCGCCACCCTACAAAGACAACACATATTCTTCCTCAGCTCTGAATATGAGCGCACGCAGTGGATAGACTCTATACATGCCCTACAGGCTTCTTCAGCCCCACCAGCGGGTTCTAACAGTATATCCATGCTCGAGTTGCAAGCCTGGGTGACGGCGTGCCGCAGCTACCTACAGACGGACATGGGCTCATATTTACTGCGCAGCGGCCGTGACGACTCCTTGCTGCTCGGCGATTTGCAGTTACACATAGGGGGCATGACGTCACCGCTGGACACCGCGGCAGACTATTACATAGTTGTGGAGGTCGATTCATACGGACACTACTTCCGCAAGGCAAAATCGAAGTTAGTATGCAGAAGCTCTCAGCCGAGATGGAACGAGAGCTTCACTTTAGACCTAGAAGGGTCACAGAACTTACGGCTGTTGTTATATGAAGATGCGGTGCGACCAGTCCTTCGAGGAAAATGCACTATCAAGGTGTCGCGCGAGTGGGTCACAGAAGGCGGCGTGTGTCGCACAGTGTCGCTGGGCGGCGGGAACCTGCCGCTGCGGGTGCGCCTGCTGCCTCCCGAGCGGTCCGCGCGCCGCGTGCCCAACGCCAAGCCGGGAGCACTCTTCGGAGCTAAGATCGCGCATGTTGCCAGACGTGAAAAGCGCAACATTCCTTTCATAATAAGCGCGTGCGTGCGGGAAGTTGAAAGACGTGGCCTGCACGAAGTGGGAGTTTATCGCGTCTCCGGGAGCGCATCGGATCTCAACCGACTGAAGAAGAGCTTCGAGACTAATCCCTACGAAGCAGAGCAGCTATTAAAAGAAGTAGACATACACTCCGTGACGGGAGTTTTAAAGTTGTATCTAAGAGAACTGCCCGAGGCCCTGTTCACGGATGCACTTTACCCTGAACTTTTGAAAGCTTGGGGATCCGTACAGGGTGTCGGAATTTCCGTTGATTCTGGACCGGCACACACCAGACGTCACGCCCTGTTGAAATGCTATGCTCAGTTACCGGATCTGAACAAAAACTGCATCGACTTCCTTCTGAACCACTTCGTCAAAGTGAATCAGCACGAAGGCGAGAACAAGATGTCGCTGCACAACCTGGCGACGGTGTTCGGGCCCACGCTGCTCCGGCCGGCGAGCGGCGGCGGCGGCGCGGGCGGCAAGCAGCGCAGCGACCCGCTGGCGGCCGGCACCGTGGACGCCATGGCGCAGGCCGGCATCCTCTATTGTCTGCTGCAGCACCGCCAGCTCGCCGCGCAGCTCTCCTCGCACCACCGCGCGCCGCACCACGTGCTCGACTGA
Protein
MSVYGDFQRVWVQRFPESALPAAWEEDVRANLAKHKQKVAILREELEKEEFYVEYLETLLSDVEKHKAASQDNKTTPPSGSDVNELDDKVSEIKQVSKTDSLSKKSDLSLNSNNDNSIEEVICEEVQLRNKQMHIAERSSVNQCINELSSNLVATEAARRRCNSEIVHRTENNQDKVAVDQTSHSQSKNRPTSQTGDFVTVIEVNGLKLAENASKKSEESPQSSESSPVDPVSVAKKKVPPKPPPKVFSKRGVSLPESAGVDDSPPSSLGRKIRNAESRESIASRASTPSISERVKSYESINSLSSERKRSGGAATPRSIDEEVTSTTPDLPEGTDADKSAPLSLESIPASVPIAEDEPYYDQVPTDANDGEYVYIQAGGTGSSAEEGPSSQPTPSAPPAPRLDSPTCTIAPNYVNIHYFIQQAADAAEMSEGVTDMADSSDTPLLLRTISSDNETNATPPSLRKLQTQESNISNNAEAERLTMHRCIITSIIESETVYVECLYVMEKYMNAIKATLSTSQPVITEEEFNTIFYKISELHELHKSFLEGLKAAVASWEEPLSVGTHFKKMAENINVYGAFLHNYGRATDAVRRRCATSQNFAHLTKQISCHGQPMSLDDLLHKPVARVQKNALVLHDLIKYTPASHPDHAMLTDALNMTQHFLDEFNIIQTKSMFPNADRAQRRLVKNSFIVELSDGHRKLRHLFLFNDVIACAKYKASGRDKFTFELKWFIPLPDIVVVDEDSAGAGAVEARETSPANIVALKSQASTVRDQILAEERAATDDKKIRLGSRGAAEKQRKKLAELEGQLVLASPNLVFRVGARAPGAATLQRQHIFFLSSEYERTQWIDSIHALQASSAPPAGSNSISMLELQAWVTACRSYLQTDMGSYLLRSGRDDSLLLGDLQLHIGGMTSPLDTAADYYIVVEVDSYGHYFRKAKSKLVCRSSQPRWNESFTLDLEGSQNLRLLLYEDAVRPVLRGKCTIKVSREWVTEGGVCRTVSLGGGNLPLRVRLLPPERSARRVPNAKPGALFGAKIAHVARREKRNIPFIISACVREVERRGLHEVGVYRVSGSASDLNRLKKSFETNPYEAEQLLKEVDIHSVTGVLKLYLRELPEALFTDALYPELLKAWGSVQGVGISVDSGPAHTRRHALLKCYAQLPDLNKNCIDFLLNHFVKVNQHEGENKMSLHNLATVFGPTLLRPASGGGGAGGKQRSDPLAAGTVDAMAQAGILYCLLQHRQLAAQLSSHHRAPHHVLD

Summary

EMBL
BABH01013957    BABH01013958    BABH01013959    KQ461154    KPJ08531.1    AGBW02011442    + More
OWR46644.1    GL435311    EFN73525.1    ADTU01013249    ADTU01013250    KK107154    QOIP01000001    EZA56890.1    RLU27534.1    KK852473    KDR23111.1    KQ981490    KYN41070.1    KQ976401    KYM92529.1    KQ979851    KYN18842.1    GL445346    EFN89746.1    KQ978023    KYM97875.1    KQ435922    KOX68654.1    KQ414632    KOC67113.1    GL767671    EFZ13336.1    KZ288232    PBC31519.1    GBYB01002280    JAG72047.1    NNAY01000390    OXU28720.1    KQ982696    KYQ51983.1    PYGN01002354    PSN30679.1    GFDL01000652    JAV34393.1    DS231864    EDS40214.1    GFDL01000638    JAV34407.1    GFDL01000644    JAV34401.1    CVRI01000063    CRL04369.1    GANO01004108    JAB55763.1    CRL04368.1    KQ434998    KZC13266.1    GDUN01000775    JAN95144.1    AAZO01001490    AAZO01001491    DS235088    EEB11611.1    GANO01003785    JAB56086.1    AXCN02001228    AXCN02001229    GDHF01028194    JAI24120.1    GAKP01006219    JAC52733.1    GAKP01006218    JAC52734.1    GAMC01019222    GAMC01019220    GAMC01019215    JAB87335.1    GAMC01019224    JAB87331.1    AAAB01008963    EAA12056.5    ADMH02000116    ETN67787.1    GGFJ01000358    MBW49499.1    GBXI01004329    JAD09963.1    GGFK01001276    MBW34597.1    GGFK01001277    MBW34598.1    GGFK01001282    MBW34603.1    GGFK01001283    MBW34604.1    GGFJ01000344    MBW49485.1    GBXI01013012    JAD01280.1    GGFM01000790    MBW21541.1    GGFJ01000560    MBW49701.1    ATLV01013120    ATLV01013121    ATLV01013122    KE524840    KFB37252.1    AXCM01002887    KQ971330    EFA00987.1    APCN01004869    JRES01001179    KNC24763.1    CH916370    EDW00108.1    JXJN01009056    GFDL01000648    JAV34397.1    OUUW01000011    SPP86735.1    SPP86737.1    GFDL01000643    JAV34402.1    AJWK01012449    AJWK01012450    AJWK01012451    AJWK01012452    SPP86734.1    CH379063    KRT05847.1    SPP86736.1    KRT05848.1    EDY72023.1    CH954183    EDV45338.1    CCAG010006530    CH933812    KRG07092.1    CH940653    KRF80544.1    KRF80543.1    KRG07093.1    EDW62298.1    KRG07094.1    CM000162    KRK05772.1    KRK05770.1    EDX00759.1   
Pfam
PF00620   RhoGAP        + More
PF00621   RhoGEF
PF09036   Bcr-Abl_Oligo
PF00168   C2
Interpro
IPR001849   PH_domain        + More
IPR000219   DH-domain       
IPR036481   Bcr-Abl_oncoprot_oligo_sf       
IPR001331   GDS_CDC24_CS       
IPR035899   DBL_dom_sf       
IPR000198   RhoGAP_dom       
IPR008936   Rho_GTPase_activation_prot       
IPR015123   Bcr-Abl_oncoprot_oligo       
IPR037769   Abr/Bcr       
IPR035892   C2_domain_sf       
IPR000008   C2_dom       
IPR011993   PH-like_dom_sf       
SUPFAM
SSF48065   SSF48065        + More
SSF48350   SSF48350       
PDB
5N7E     E-value=6.02304e-36,     Score=383

Ontologies

Topology

Length:
1259
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02795
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1259
 
 

Population Genetic Test Statistics

Pi
230.450292
Theta
185.602503
Tajima's D
1.085339
CLR
0.871866
CSRT
0.686065696715164
Interpretation
Uncertain
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