SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04608
Pre Gene Modal
BGIBMGA005495
Annotation
PREDICTED:_PRKR-interacting_protein_1_homolog_[Papilio_polytes]
Location in the cell
Nuclear   Reliability : 4.31
 

Sequence

CDS
ATGAGTAACAAGATTACTAGCGATTCAGATGAAGAGAAGAAACCAGTTTTAATAAAGAACGCTACAGACTTACAACGGCTTAAGCTTGAAAAATTGATGAAAAACCCTGATAAACCAGTTGTTATACCAGATCCTCCTAAATCGAAGAATTTACCACCGCCTCCCGACTTCGTACGAAATGTAATGGGTTCGAGTGCTGGTGCTGGTTCTGGAGAGTTCCATGTTTACAGACATTTAAGGCGAAAAGAATATGCTAGACAGAGATTCATTCAAGAAAAGAGCGAAAAGGAAAAACTGGACGAGGAGTATCACAAAAAAATAGAAGATAACAGAAGAGCAGCAGAAGAACGCACTGCTAAGAAACGGGCAAAGAGATTGAAGAAAAAGCGAAATGCAAAAATTAAAGAGAAAAGAAACAAAACAGAAAACAAGGAAGCTGCTTCATCACAATCTGATGTAAGCAGTGACAATGACAATGAAAGTAATGGAAACATCCAGGATTGTGATGGAACTGATAAGCAGAAGAATGAGGATATAGGTTCATCAAAATTTGAACATAATAGTAGAAATAAGTCTGAGAACATTGAACAAAAAAGCAGTGAGGATATTTAA
Protein
MSNKITSDSDEEKKPVLIKNATDLQRLKLEKLMKNPDKPVVIPDPPKSKNLPPPPDFVRNVMGSSAGAGSGEFHVYRHLRRKEYARQRFIQEKSEKEKLDEEYHKKIEDNRRAAEERTAKKRAKRLKKKRNAKIKEKRNKTENKEAASSQSDVSSDNDNESNGNIQDCDGTDKQKNEDIGSSKFEHNSRNKSENIEQKSSEDI

Summary

Uniprot
Pfam
PF06658   DUF1168
Interpro
IPR009548   Prkrip1       
ProteinModelPortal
PDB
6ICZ     E-value=2.20806e-16,     Score=205

Ontologies

Topology

Length:
203
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05875
Exp number, first 60 AAs:
0.00948
Total prob of N-in:
0.18048
outside
1  -  203
 
 

Population Genetic Test Statistics

Pi
202.801789
Theta
160.521985
Tajima's D
0.645122
CLR
0
CSRT
0.56117194140293
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号