SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04606
Pre Gene Modal
BGIBMGA005494
Annotation
Uncharacterized_protein_OBRU01_05951?_partial_[Operophtera_brumata]
Location in the cell
Mitochondrial   Reliability : 0.986
 

Sequence

CDS
ATGTTCTCTAGACGTCATAAGACAGACGCGAAAACCGTACAGTTCATGACCGCAACGAATGCGAATACACATTATCGCAGACAGGACCTGCTAGAGGAAACATTGGACTGCTATACGAGTTTAATTTATGAGAGCCGAAATCCTGGCCCCTTTCCAGACAGACCAGACCCTTTCGGCACTGACAAGGTGGATATAGCATTCATGACTGTTGCTGCTTATATGAAGCTTCGAAATGATAACAATGCTTTCATCGACCTACTGCCGGTGACACCAGTTTTTGCCCATCAAATGAACGTTGAAAACAAACCAGGATATTTCTCAGACATAATCATTCACCGTGATAAGAAGGCACACAACGTCAATACACTTTTGGATTTACGTGGGTGTACGTTCGCCTACAGCGATGATGAATCTCTTAGCGGAAGCAAAATTATTCTTAAAACATTAAAAGAAAAAGGTGAAAATGCGTCTTTCTTCGGGTCATTATTGAGATCTGGATCGCATTTGGCATCAGCTCAAATGGTATTATCAAAACAAGCAGAATGGGCTGCAGTAGATTCAACAACACTACTTTACACAAAAAAGTACATGTTTGAAGGTGGTAAAGATATAATTACCCTGGAGACGTTGGGTCGACTTCCGCCTTATCCTATTGTTGCGAAAGCAGATCTTAGAGCGGAGGTGAAGCAAGCTATAGTCAAAGCTTTTCTGAATTTACCTCATACTAGTGAATGGAAAAATAAATTTGCAAAATTTGGTATACTCAAATTTGTTCATAATAGTGATGTCGCTTACGATGGGCAGGTTGCACAGATGTGGGCCTGCCAGAGCGAAAAACTCAACGTTAGGTATTATTAG
Protein
MFSRRHKTDAKTVQFMTATNANTHYRRQDLLEETLDCYTSLIYESRNPGPFPDRPDPFGTDKVDIAFMTVAAYMKLRNDNNAFIDLLPVTPVFAHQMNVENKPGYFSDIIIHRDKKAHNVNTLLDLRGCTFAYSDDESLSGSKIILKTLKEKGENASFFGSLLRSGSHLASAQMVLSKQAEWAAVDSTTLLYTKKYMFEGGKDIITLETLGRLPPYPIVAKADLRAEVKQAIVKAFLNLPHTSEWKNKFAKFGILKFVHNSDVAYDGQVAQMWACQSEKLNVRYY

Summary

EMBL
BABH01013949    NWSH01004892    PCG64605.1    GAIX01012053    JAA80507.1    ODYU01004863    + More
SOQ45176.1    RSAL01000041    RVE50856.1    JTDY01000648    KOB76344.1    KQ459595    KPI95596.1    KQ461154    KPJ08525.1    AGBW02011442    OWR46637.1    GECZ01032420    JAS37349.1    GEBQ01027252    JAT12725.1    GECU01017281    JAS90425.1    GEDC01015358    GEDC01005086    JAS21940.1    JAS32212.1    NEVH01012097    PNF30364.1    PYGN01000132    PSN53295.1    KK853297    KDR08778.1    ABLF02030101    AK339861    BAH70568.1    AK339860    BAH70567.1    GFAH01000461    JAV47928.1    GGMS01004004    MBY73207.1    GBBM01005402    JAC30016.1    GACK01006017    JAA59017.1    GFAC01004629    JAT94559.1    GL732609    EFX71476.1    GEDV01003624    JAP84933.1    GDIP01189050    JAJ34352.1    GEFM01001964    JAP73832.1    GDIP01115063    GDIP01101658    LRGB01001361    JAL88651.1    KZS12607.1    GDIP01107264    JAL96450.1    GG666503    EEN61806.1    GDIP01182145    JAJ41257.1    GDIP01079261    JAM24454.1    KK117419    KFM70426.1    ABJB010145156    DS785766    EEC09889.1    PZQS01000004    PVD32772.1    GDIQ01056031    JAN38706.1    GDIQ01009401    JAN85336.1    GDIQ01036390    JAN58347.1    AAGJ04149322    AAGJ04149323    NEDP02005434    OWF40959.1    KB201304    ESO97728.1    QCYY01001490    ROT77720.1    RQTK01000812    RUS74645.1    GDIP01022782    JAM80933.1    GFWV01007439    MAA32169.1    HACG01027345    CEK74210.1    GDIQ01037387    JAN57350.1    MRZV01000410    PIK50627.1    KQ435701    KOX80385.1    DPSZ01000008    HCI78123.1    RPOR01000102    RPJ45691.1    KQ414668    KOC64609.1    LSTD01000250    OAI48104.1    PABI01000085    MAT98395.1    QHXD01000419    PYS25343.1    QAZA01000021    PTY01874.1    QHRV01000089    PYM65413.1    RAWG01000025    RKH46222.1    MNGJ01000125    OLD07126.1    AMQM01007210    KB097587    ESN93821.1    QEUW01000665    RIK28351.1    LSSZ01000038    OAI41584.1    MPIN01000003    OJH40040.1    ADVG01000003    EFH84043.1    AP017367    BAU41331.1   
Interpro
IPR005770   PhnD       
PDB
3QUJ     E-value=4.68299e-08,     Score=136

Ontologies

Topology

Length:
285
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03183
Exp number, first 60 AAs:
4e-05
Total prob of N-in:
0.15953
outside
1  -  285
 
 

Population Genetic Test Statistics

Pi
185.241922
Theta
161.014469
Tajima's D
0.528048
CLR
0
CSRT
0.518374081295935
Interpretation
Uncertain
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