Gene

KWMTBOMO04601

Annotation

PREDICTED:_uncharacterized_protein_LOC105381391_[Plutella_xylostella]

Location

Bomo_Chr8(-):10591573-10592896      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.273

CDS

ATGTCGAAAATAGAAGAAAAAAACGACGATCTAGACTATTACGACATAGAAAACTCGGATCTTGAACAACCTGATATAGTGACGCTAGTTAAACAAGGCAAACGCACATTTATATACAAGTGTAACAAACAACAACTACAAAATATTCTTGAGAGTGAAAACGTAACTTATAAATCGGAAGCAACACTTGATCAACTACGTAAATTAACGAGTGATTACTATAAATTAAAAGAAACTAACAAAAATAGTGCTCAGTTATCAGCCAACATGTCACTTATATCAAATTTGAAATCCTTTGATGGAGAAAAGTGGTCAGTGTTCCAGGAACAGTTAGACTGTTTCTTTATCGTTAATGAAGTGTCCGATGAAAAAAAAGTACCACTATTAATCACTAAATTAGCACCCAAAGTTTATGAAGTCCTCTCTTATTTATGCAAACCAAAAAAACCACAGGAACTAAAATTTGACCAACTTTGTTTCAAGTTAGCAGCAAAATATGATCAAAAACTACCATCAGCCATTGAAAGAGCAAATTTCAGACAGCGGAACCAGGCACCGAATGAAAAAGTAGAAGATTACGTCTTGGAACTGAGGAAACTTGCTGCAAAATGTAACTTCAAAGATATGGAGGACCAAGTCAAAGAGAAACTAATGGACGGAGTGTTCTCAAAAATGATAAAGTTTGAATTGATGAAGAGTGCTAGTGATGCAACACTAGAAAGGTGTATTGAATTAGCCCGCACTGTTGAAGCAGCAATATTACAAGCAAACGGGGCCACAAATGAAGTTTCGGAAATATTTGTCTACAAATCAACCAATAAAACACCACAACAGCAAAGAAATACCTACCAACAAAAAAATCAATGTTACTGCTGCGGAAAATGGAACCACCTAAAGCGGGACTGCAGACTCAACAGAAAATATTGCTCTGAATGTGGAATTCAAGGACATATCTTCAGAATGTGTCCCAAGAAGCAAAGAAAAGTAAATGTTCTGCAGGAAGATAACCAACAAAAGGATAAAAATACAGATAATGAACCCACTGAGTTTGAACCAAAATATTATGAAACATATGCATGTAACACTGTGAGTAAAATACCACCTTAA

Protein

MSKIEEKNDDLDYYDIENSDLEQPDIVTLVKQGKRTFIYKCNKQQLQNILESENVTYKSEATLDQLRKLTSDYYKLKETNKNSAQLSANMSLISNLKSFDGEKWSVFQEQLDCFFIVNEVSDEKKVPLLITKLAPKVYEVLSYLCKPKKPQELKFDQLCFKLAAKYDQKLPSAIERANFRQRNQAPNEKVEDYVLELRKLAAKCNFKDMEDQVKEKLMDGVFSKMIKFELMKSASDATLERCIELARTVEAAILQANGATNEVSEIFVYKSTNKTPQQQRNTYQQKNQCYCCGKWNHLKRDCRLNRKYCSECGIQGHIFRMCPKKQRKVNVLQEDNQQKDKNTDNEPTEFEPKYYETYACNTVSKIPP

Uniprot

A0A1E1W962   A0A1E1W1S4   A0A1B6MJ81   A0A1B6MUT2   A0A1B6L0V9   A0A1B6KDA3   + More
A0A3P8QD94   A0A3P8NHI5   A0A1A8C840   A0A0J7KFJ3   A0A1B6CPB9   A0A1B6DD07   A0A1Y1MRA2   A0A0J7KG11   A0A1B6E6W0   A0A1B6CK52   A0A3S3NQ29   A0A1A8FCH6   A0A3B3Q7L2   A0A2G8L6D9   A0A3P8NG55   A0A2A4J6F2   A0A3S0ZSV8   A0A1X7TS61   X1WRS2   A0A1Y1LR51   A0A1X7SGY2   A0A1X7T4D7   J9JNK8   A0A085LXT4   A0A1Y1KIG3   A0A1X7TH22   J9KFN3   A0A131Y1G8   X1XT86   A0A1Y1NFA4   A0A1Y1N2Q0   A0A1E1XG22   A0A1W7R696   A0A2S2P240   A0A3Q0JLN5   W4LLX0  

Pubmed

28004739    29240929    29023486    24929829    28503490    24476823    + More

EMBL

GDQN01007522    JAT83532.1    GDQN01010213    JAT80841.1    GEBQ01003960    JAT36017.1    + More
GEBQ01006635    GEBQ01000281    JAT33342.1    JAT39696.1    GEBQ01022644    GEBQ01012433    JAT17333.1    JAT27544.1    GEBQ01030602    JAT09375.1    HADZ01011823    HAEA01016148    SBP75764.1    LBMM01008052    KMQ89188.1    GEDC01021971    JAS15327.1    GEDC01013717    JAS23581.1    GEZM01030100    JAV85807.1    KMQ89189.1    GEDC01007675    GEDC01003661    JAS29623.1    JAS33637.1    GEDC01023506    GEDC01023205    JAS13792.1    JAS14093.1    NCKU01014527    RWR99571.1    HAEB01010230    SBQ56757.1    MRZV01000199    PIK55839.1    NWSH01002788    PCG67531.1    RQTK01000185    RUS85038.1    ABLF02030456    GEZM01050895    JAV75318.1    ABLF02001462    ABLF02041863    ABLF02066900    ABLF02066901    KL363264    KFD49780.1    GEZM01085308    JAV60010.1    ABLF02036937    GEFM01002452    JAP73344.1    ABLF02012266    ABLF02012271    GEZM01009753    JAV94337.1    GEZM01014356    JAV92134.1    GFAC01001149    JAT98039.1    GEHC01000992    JAV46653.1    GGMR01010825    MBY23444.1    AZHX01001899    ETW98899.1   

Proteomes

UP000265100    UP000036403    UP000285301    UP000261540    UP000230750    UP000218220    + More
UP000271974    UP000007879    UP000007819    UP000079169    UP000019140   

Pfam

PF00078   RVT_1        + More
PF17917   RT_RNaseH
PF00665   rve
PF17919   RT_RNaseH_2
PF17921   Integrase_H2C2
PF00098   zf-CCHC
PF00077   RVP
PF00378   ECH_1
PF03732   Retrotrans_gag

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       
IPR041373   RT_RNaseH       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR001584   Integrase_cat-core       
IPR041577   RT_RNaseH_2       
IPR012337   RNaseH-like_sf       
IPR001995   Peptidase_A2_cat       
IPR018061   Retropepsins       
IPR001753   Enoyl-CoA_hydra/iso       
IPR029045   ClpP/crotonase-like_dom_sf       
IPR005162   Retrotrans_gag_dom       

SUPFAM

SSF57756   SSF57756        + More
SSF50630   SSF50630       
SSF53098   SSF53098       
SSF52096   SSF52096       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

A0A1E1W962   A0A1E1W1S4   A0A1B6MJ81   A0A1B6MUT2   A0A1B6L0V9   A0A1B6KDA3   + More
A0A3P8QD94   A0A3P8NHI5   A0A1A8C840   A0A0J7KFJ3   A0A1B6CPB9   A0A1B6DD07   A0A1Y1MRA2   A0A0J7KG11   A0A1B6E6W0   A0A1B6CK52   A0A3S3NQ29   A0A1A8FCH6   A0A3B3Q7L2   A0A2G8L6D9   A0A3P8NG55   A0A2A4J6F2   A0A3S0ZSV8   A0A1X7TS61   X1WRS2   A0A1Y1LR51   A0A1X7SGY2   A0A1X7T4D7   J9JNK8   A0A085LXT4   A0A1Y1KIG3   A0A1X7TH22   J9KFN3   A0A131Y1G8   X1XT86   A0A1Y1NFA4   A0A1Y1N2Q0   A0A1E1XG22   A0A1W7R696   A0A2S2P240   A0A3Q0JLN5   W4LLX0  

PDB

5O2U     E-value=0.00106175,     Score=99

KEGG

NA   

GO

GO:0008270   GO:0003676   GO:0004190   GO:0015074   GO:0006468   GO:0020037   GO:0016491   GO:0007165   GO:0015031   GO:0016020   GO:0016742   GO:0003824  

Length:

368

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03050

outside

1  -  368

 

 

Pi

323.112395

Theta

207.450206

Tajima's D

1.765536

CLR

0.182241

CSRT

0.84070796460177

Interpretation

Uncertain