SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04598
Pre Gene Modal
BGIBMGA005490
Annotation
PREDICTED:_septin-2_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.34
 

Sequence

CDS
ATGGAAAACAGTGATTCTTTCGCTATATTAGACATTAATCTCAGTGATAAGGATAAGGACGAACTGAAAAAAAATGATGGAAATAAAAAATCGCCAATCACAACTGTCATAAAAATTCAACGTGATCGCGGTGAACGCGACTACATTGGATTTGCTACATTGCCTGAACAGGTGCACCGCAAATCAGTGAAGAGAGGTTTCGACTTCACTCTCATGGTTGTCGGAGAATCAGGCCTCGGAAAATCAACATTGATAAACAGTTTATTTTTAGGAGATCTTTACAAAAATCGAAAAATTCCAGATGTTCAAGATAGAATAGAAAAAACGACGACAATCGAAAAGAAAACTATGGAAATAGAAGAACGAGGCGTCAAATTACGTCTGACGATTGTTGACACGCCTGGCTTTGGAGACGCGATTAACTGTGAAGACTCGTGGCGCGTTTGTTCAGCATACATTGACGAACAATTCAGGCAGTATTTTACTGATGAAAGTGGTCTGAACAGGCGACATATGCAGGACAACCGAGTTCATTGCTGTCTTTACTTCGTTCCGCCTTGGGCGCATAGCCTACGACAAGTGGATCTCGAAATGATGAAGCGTCTGCATCGCAAAGTGAACATCGTGGTGGTAATCGCAAAAGCGGACTCTCTTACGGCGATCGAAATAAAACGACTCAAGGCACGAATACTTAACGATCTTGAAGAACACCAGATACAAGTATACCAATTCCCGGAATGTGACAGCGACGAAGATGAAGACTTCAAACAACAAGACCGCGAGTTAAAGGAAGCGGCCCCATTTGCTGTGGTCGCTTCTGATATAGTCCTCGAGATGGGAGGCAAAAGAGTGCGGGGTAGACAGTATCCGTGGGGGATTGTTGATGTTGAAAATCCACGGCATTCAGACTTCACCAAACTTAGAACAATGTTAATTTCTACACACATGCAGGATCTGAAGGACGTGACTCAAGATGTGCACTACGAAAATTTCCGTGCTCAGTGCATTTCTCAAATTTCACAACATGCCATGCGTGAACGGGGGAAACTGAAGAGAGACTCTATGGGTAACAACAACGACGTGGTCATCACCGACACTGATCGACTCTTGCTCCAAAAAGACGAAGAGATACGAAGAATGCAAGATATGTTAACTCAAATGCAACAAAAACTAAAAGCTTCCGATAAAAAACACGACAGTATAATAGATGTATAG
Protein
MENSDSFAILDINLSDKDKDELKKNDGNKKSPITTVIKIQRDRGERDYIGFATLPEQVHRKSVKRGFDFTLMVVGESGLGKSTLINSLFLGDLYKNRKIPDVQDRIEKTTTIEKKTMEIEERGVKLRLTIVDTPGFGDAINCEDSWRVCSAYIDEQFRQYFTDESGLNRRHMQDNRVHCCLYFVPPWAHSLRQVDLEMMKRLHRKVNIVVVIAKADSLTAIEIKRLKARILNDLEEHQIQVYQFPECDSDEDEDFKQQDRELKEAAPFAVVASDIVLEMGGKRVRGRQYPWGIVDVENPRHSDFTKLRTMLISTHMQDLKDVTQDVHYENFRAQCISQISQHAMRERGKLKRDSMGNNNDVVITDTDRLLLQKDEEIRRMQDMLTQMQQKLKASDKKHDSIIDV

Summary

Similarity
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
Belongs to the FBPase class 1 family.
EMBL
ODYU01000492    SOQ35360.1    BABH01013940    AGBW02008208    OWR54004.1    KQ459595    + More
KPI95589.1    KQ461154    KPJ08518.1    AJVK01001049    AJWK01024346    GEZM01087601    JAV58588.1    GAMC01009716    JAB96839.1    GEZM01087602    JAV58587.1    JXJN01018870    GBXI01001856    JAD12436.1    GDHF01005684    JAI46630.1    GAMC01009717    JAB96838.1    CH964239    EDW82630.2    GAKP01011912    JAC47040.1    OUUW01000003    SPP78458.1    CH902625    EDV35246.2    CH954180    KQS29962.1    EDV46402.1    APGK01040123    KB740975    ENN76565.1    AE014298    AAF48645.1    AAF48646.1    AAN09414.1    AAN09415.1    AAN09416.1    AAN09417.1    KB632267    ERL91010.1    SPP78459.1    CH379064    EAL31722.3    KRT06485.1    CM000366    EDX18115.1    CM000162    KRK06809.1    BT132948    AAS65390.1    AEW43888.1    EDX02509.1    KRK06807.1    KRK06808.1    CH916371    EDV92096.1    CP012528    ALC49263.1    AY052045    AAK93469.1    PYGN01000512    PSN45049.1    JRES01000728    KNC28935.1    CH940660    EDW58016.2    BT099791    ACV91628.1    GDHC01003191    JAQ15438.1    GBHO01017152    JAG26452.1    GBBI01001687    JAC17025.1    BT127796    AEE62758.1    KQ971362    EFA08920.1    ACPB03005594    GL445250    EFN89968.1    KK853603    KDR06354.1    KQ414642    KOC66727.1    GL887908    EGI69561.1    KK107021    EZA62393.1    GBHO01017150    JAG26454.1    KQ978881    KYN27697.1    ADTU01018831    GECZ01003974    JAS65795.1    JR046791    AEY60250.1    GL435531    EFN73231.1    DS235773    EEB16782.1    UFQT01000707    SSX26681.1    GEDC01031062    JAS06236.1    ATLV01017157    KE525157    KFB41862.1    GAPW01001966    JAC11632.1    CH477719    EAT36940.1    GFDL01009594    JAV25451.1    DS232221    EDS37805.1    GFDL01009436    JAV25609.1    GFDL01009237    JAV25808.1    AAAB01008847    EAA06877.5    GGFK01006413    MBW39734.1    KQ976692    KYM77838.1    AXCN02001412    KQ982762    KYQ51070.1    ADMH02001263    ETN63334.1    GGFJ01006850    MBW55991.1    APCN01000987    GBXI01006144    GBXI01002471    JAD08148.1    JAD11821.1    GDHF01024689    JAI27625.1    CCAG010020401    KQ977294    KYN03951.1    KA649036    AFP63665.1    QOIP01000011    RLU17079.1    AXCM01001219    GDRN01091225    JAI60314.1    CH899827    EAT32450.1   
Pfam
PF00735   Septin        + More
PF10545   MADF_DNA_bdg
PF00316   FBPase
PF00067   p450
Interpro
IPR027417   P-loop_NTPase        + More
IPR030379   G_SEPTIN_dom       
IPR016491   Septin       
IPR006578   MADF-dom       
IPR033391   FBPase_N       
IPR000146   FBPase_class-1       
IPR020548   Fructose_bisphosphatase_AS       
IPR028343   FBPtase       
IPR008113   Septin2       
IPR036396   Cyt_P450_sf       
IPR001128   Cyt_P450       
IPR030643   Septin4       
SUPFAM
SSF52540   SSF52540        + More
SSF48264   SSF48264       
Gene 3D
PDB
2QAG     E-value=6.42405e-108,     Score=999

Ontologies

Topology

Length:
404
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0545
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00422
outside
1  -  404
 
 

Population Genetic Test Statistics

Pi
213.764105
Theta
175.246248
Tajima's D
0.584513
CLR
0.664805
CSRT
0.542722863856807
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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