SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04593
Pre Gene Modal
BGIBMGA005324
Annotation
hypothetical_protein_KGM_20770_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.54
 

Sequence

CDS
ATGAACCTCTCAGATACATCAGATGAAGGTTCCAGCAGTGAAGAAAGCAGAAAACCAGCGAAGTGCTCGAGAAGCAATACATATGGTGCATCTTCAACTACATCACATGGATCTGCAATACAATCAGAAGATGAACCTGATACAGCAAATGAATATCATTCAAACCTCAGTACAAAACGAAGAAAAACCGAAATAGAAAATAGCACAGATCGAAATGTGAGATTAAGCAGTAGAAGCAGTATAAGTGAAAACTGCTCGTCGCCCGGCGAACACTTTGAAGATTACCGTCCTGTATTTAATGACAACGATGAAGACCAAGAGGAGAACGCATTACGACCAAGCTTTCAAAATTCTGATACAAAATTTAACAAATCTGTGAATGACATGAATGATCCCGAATATGCTTATACTGGAGAATATTCAGAAAAGTCAAAGCGAATGATGAGTAATATGGGTTACAAGCCGGGTAAAGGTCTTGGTAAATTTGAACATGGACGAACAGAGCCCGTTGAAGCTTCTGCACAAAAAGGCCGAAGAGGATTGGGCTTAAAACCTTCTATTGTTGGTAGTGTACCTGAGGACTTTAAATGGACTCCAGATGAATCCAAACCAGAGGCAAAAGAAAAAGTTATCTGGATGAGTCCCGCCCCAGATGAACCGCTTTCTGGTGACCAGTTGGAGGAATGGTTGAAGAAGGGATCAAAAAAGTTGACTATAGATGACGAAACAGACTTTGTAGAACCCCATATTCTAAAAGGAGTTTTGAAAGCAAAGACAATCTTTGATGATTTAGATGACGAAGACCTGAGGCATGCTCGTTTTAGAAGCAATCCATATGAAACTATTGGTTCAGTGATATTTTTGAACCGGGCTGCCGTTAAAATGGCGAACATAGATGCAGTTTGTGATTTTGTCTTCACTAATCCAAAAAAACAAAATGGAGAAGAAGTCATAGACAAAAAAGAGATCTTGTATTTTGCTGATGTATGTGCTGGTCCTGGTGGCTTTTCAGAATACATTCTATATCGTAGAGGGTGGAGAGCAAAAGGATTTGGTTTTACTCTAAAAGGACCCAACGATTTTAAGCTATCTGACTTTTACGCTGGACCACCAGAAACATTCCACCCCTATTATGGTACGAAAAACGACGGTAACATATTCGATCCATCAAATCTAATGTCACTAAAGGAGCACGTTTTGCAACAAACTGAAGACAAAGGCGTACATTTTTTAATGGCCGATGGGGGATTTTCAGTAGAGGGACAGGAAAACATTCAAGAAATACTTTCGAAGCAGTTGTATTTGTGTCAATGCCTCGCGGCACTGATGCTCGTGAGAACCGGCGGCCATTTTGTGGTGAAACTATTTGATGTCTTCACACGGTTTAGCATTGGCTTGATCTACATTATGTACAGATGTTTTGATAAAGTTTGTATTCATAAACCAGTGACTTCCAGACCTGCAAATTCTGAGAGGTACCTGATTTGTCTGTGGAAGAGGTCATGGACCGAGTCAGCAGAACATCACCTTTACACTGTGAACTCGATCCTATGGAACAGTACTAACAGTGATATTGATATTTTAGAACTAGTTCCTATTGACATCATACAGGAAGATACTGAATTTTTCGAATACGTTTACAAGAGTAACTGCATTCTCGGCGAAAGGCAAATACAAAATTTACTTAAGATAGCTGCATTTAGCAAACACAAAATTTTGAAAGAAATTTATCAAGCTGAAATGAAAGAACAGTGCTTGCAACTCTGGAATTTGCCAGATCAAGTCAGAACTCAACCAAAACGCCTCAATCCCGATGAAACATTAAAAAACATTTTGTCCACATTAAAAACACCCAATCCTCACAGTCTGTTCAATTTCAAAACGAATATATTAAACAAGAAACCTGAATACATAGAGGTGGAAGGTGATTTGACAAATTTCAAGAATGTATACGACTGGCACTTCATGTTCCTGAGCGGCGGTAAAAATAGTCCCGATTTAAAAATATTCATAGGTTGCGGTGGAAAACAAGTTTTTCAACTAGAATCAAGCGGATGGAGAAGCGTTTTAGATTTGCAAATAACACTACCAGCTAAAACATTGGTTTACGGAGAAATTGTTAAAGAATATCGTGGCCAAGGCAACAATCAGATGTACAGCAAATCTTTACATATTGTGGACGCACTTATGTTGGGAGGAGTTGATATCTCTGGATACCCCTTGAATGAAAGGATAAACCAATGCAACATATTTTGCACTGCCCTAAGTAAGCCCTTTGATGCTCACGTACTTCAAGTCAGATGTAAGAAGATGTTCGGGATGGAACACTTTGCTTCGGTAGTCAACAATCTCGAATACAGAGCTATGAAGCGAGTGAAGAGAGCCGTTACAATTGATGCGCCGGATCCATTGCGCAGAAACGAAATGTTTTACGTGGTTGGATCTGTGCTTTTCTTGAAAGAGATAAAAGAGCCCTGGTCATCGCAGCTATCGAAAAAAAGTGGTCTAAAATACTATTTTAGTATAGGTAAAGATAGGAAACCTCGTAGTGAATATTACATTCTGGAAGAAGCACGATTAGACATGATAGAGACATTCAGCAGTCGCCTCATGTGGTCCTGGGACGGAGCCGCTAGTGCGATACTCGATGCTCAACAACATTCCGGCCTCACGAGAGCCCAACTGGAAGAGTACATTGGTCATAATATCGATAGATAA
Protein
MNLSDTSDEGSSSEESRKPAKCSRSNTYGASSTTSHGSAIQSEDEPDTANEYHSNLSTKRRKTEIENSTDRNVRLSSRSSISENCSSPGEHFEDYRPVFNDNDEDQEENALRPSFQNSDTKFNKSVNDMNDPEYAYTGEYSEKSKRMMSNMGYKPGKGLGKFEHGRTEPVEASAQKGRRGLGLKPSIVGSVPEDFKWTPDESKPEAKEKVIWMSPAPDEPLSGDQLEEWLKKGSKKLTIDDETDFVEPHILKGVLKAKTIFDDLDDEDLRHARFRSNPYETIGSVIFLNRAAVKMANIDAVCDFVFTNPKKQNGEEVIDKKEILYFADVCAGPGGFSEYILYRRGWRAKGFGFTLKGPNDFKLSDFYAGPPETFHPYYGTKNDGNIFDPSNLMSLKEHVLQQTEDKGVHFLMADGGFSVEGQENIQEILSKQLYLCQCLAALMLVRTGGHFVVKLFDVFTRFSIGLIYIMYRCFDKVCIHKPVTSRPANSERYLICLWKRSWTESAEHHLYTVNSILWNSTNSDIDILELVPIDIIQEDTEFFEYVYKSNCILGERQIQNLLKIAAFSKHKILKEIYQAEMKEQCLQLWNLPDQVRTQPKRLNPDETLKNILSTLKTPNPHSLFNFKTNILNKKPEYIEVEGDLTNFKNVYDWHFMFLSGGKNSPDLKIFIGCGGKQVFQLESSGWRSVLDLQITLPAKTLVYGEIVKEYRGQGNNQMYSKSLHIVDALMLGGVDISGYPLNERINQCNIFCTALSKPFDAHVLQVRCKKMFGMEHFASVVNNLEYRAMKRVKRAVTIDAPDPLRRNEMFYVVGSVLFLKEIKEPWSSQLSKKSGLKYYFSIGKDRKPRSEYYILEEARLDMIETFSSRLMWSWDGAASAILDAQQHSGLTRAQLEEYIGHNIDR

Summary

Similarity
Belongs to the peptidase C2 family.
EMBL
BABH01013932    ODYU01000493    SOQ35363.1    NWSH01006328    PCG63506.1    RSAL01000041    + More
RVE50848.1    AGBW02000920    OWR55738.1    KQ461154    KPJ08514.1    KQ459595    KPI95584.1    JTDY01000457    KOB77085.1    KK852832    KDR15308.1    NEVH01000252    PNF43830.1    KU659880    AOG17679.1    UFQS01000320    UFQT01000320    SSX02836.1    SSX23204.1    SSX02837.1    SSX23205.1    SSX02835.1    SSX23203.1    GEDC01028552    JAS08746.1    NNAY01002190    OXU21846.1    AXCN02001449    JH432211    ATLV01019258    KE525266    KFB44010.1    KZ288186    PBC34809.1    KU660003    AOG17801.1    NCKU01003052    NCKU01002705    RWS08274.1    RWS08968.1    GGLE01001469    MBY05595.1    ADTU01001538    KQ976625    KYM79059.1    LBMM01001287    KMQ96577.1    GFWV01000338    MAA25068.1    AXCM01000181    KQ435693    KOX81002.1    GL887491    EGI71096.1    JXUM01084758    KQ563457    KXJ73806.1    GFJQ02004105    JAW02865.1    GFAC01001232    JAT97956.1    GEFM01004384    JAP71412.1    KK107847    QOIP01000005    EZA47486.1    RLU23040.1    AJWK01001964    GEFH01002894    JAP65687.1    GFDL01012011    JAV23034.1    GL732582    EFX74631.1    AAAB01008963    EAA12036.6    CH477414    EAT41411.1    GACK01002659    JAA62375.1    GL762556    EFZ21153.1    GECU01018497    JAS89209.1    KQ979609    KYN20198.1    KQ981979    KYN31441.1    KQ976932    KYN07037.1    APCN01004841    APCN01004842    GDIQ01239982    JAK11743.1    GDIQ01034606    JAN60131.1    GDIQ01016744    JAN77993.1    LRGB01003134    KZS04093.1    GDIQ01245426    JAK06299.1    GL453568    EFN75874.1    GEDV01009803    JAP78754.1    KQ414666    KOC65112.1    GGFK01007309    MBW40630.1    KQ982585    KYQ54327.1    GGFJ01001993    MBW51134.1    GAMC01002782    JAC03774.1    GDIQ01138627    JAL13099.1    GFPF01006542    MAA17688.1    GDIP01036149    JAM67566.1    GGFJ01001992    MBW51133.1    GFPF01006541    MAA17687.1    GDIQ01050807    JAN43930.1    GDIQ01148224    JAL03502.1    GDIQ01148225    JAL03501.1    KQ434829    KZC07705.1    GDIQ01174603    JAK77122.1    GGFL01004166    MBW68344.1    GDIP01156731    JAJ66671.1    GGFJ01002302    MBW51443.1    GFAA01001494    JAU01941.1    GDIQ01215693    JAK36032.1    GDIQ01064347    JAN30390.1    GBYB01004741    JAG74508.1    GBYB01000782    GBYB01000784    JAG70549.1    JAG70551.1    GFDF01008476    JAV05608.1    HACA01022472    CDW39833.1    AJVK01007261    GDIQ01084940    JAN09797.1    GFTR01007910    JAW08516.1    GBBM01003591    JAC31827.1    GDIQ01178346    JAK73379.1   
Pfam
PF01585   G-patch        + More
PF01728   FtsJ
PF00004   AAA
PF07651   ANTH
PF00435   Spectrin
PF15410   PH_9
PF02138   Beach
PF00307   CH
PF00400   WD40
PF00641   zf-RanBP
PF00648   Peptidase_C2
PF00271   Helicase_C
PF00270   DEAD
Interpro
IPR029063   SAM-dependent_MTases        + More
IPR025816   RrmJ-type_MeTrfase       
IPR002877   rRNA_MeTrfase_FtsJ_dom       
IPR030376   Cap_mRNA_MeTrfase_1       
IPR000467   G_patch_dom       
IPR003593   AAA+_ATPase       
IPR003959   ATPase_AAA_core       
IPR027417   P-loop_NTPase       
IPR011417   ANTH_dom       
IPR013809   ENTH       
IPR008942   ENTH_VHS       
IPR014712   Clathrin_AP_dom2       
IPR001202   WW_dom       
IPR036020   WW_dom_sf       
IPR036372   BEACH_dom_sf       
IPR001452   SH3_domain       
IPR001605   PH_dom-spectrin-type       
IPR001715   CH-domain       
IPR036872   CH_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR018159   Spectrin/alpha-actinin       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR002017   Spectrin_repeat       
IPR011993   PH-like_dom_sf       
IPR041681   PH_9       
IPR001589   Actinin_actin-bd_CS       
IPR036322   WD40_repeat_dom_sf       
IPR000409   BEACH_dom       
IPR011009   Kinase-like_dom_sf       
IPR036028   SH3-like_dom_sf       
IPR001849   PH_domain       
IPR000169   Pept_cys_AS       
IPR001300   Peptidase_C2_calpain_cat       
IPR001876   Znf_RanBP2       
IPR038765   Papain-like_cys_pep_sf       
IPR022684   Calpain_cysteine_protease       
IPR014014   RNA_helicase_DEAD_Q_motif       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR000629   RNA-helicase_DEAD-box_CS       
IPR014001   Helicase_ATP-bd       
IPR001650   Helicase_C       
SUPFAM
SSF53335   SSF53335        + More
SSF52540   SSF52540       
SSF48464   SSF48464       
SSF51045   SSF51045       
SSF50044   SSF50044       
SSF81837   SSF81837       
SSF56112   SSF56112       
SSF50978   SSF50978       
SSF47576   SSF47576       
SSF54001   SSF54001       
PDB
4N4A     E-value=3.49111e-120,     Score=1108

Ontologies

Topology

Length:
905
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0616800000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00066
outside
1  -  905
 
 

Population Genetic Test Statistics

Pi
211.929652
Theta
152.104059
Tajima's D
1.208216
CLR
0.162083
CSRT
0.72096395180241
Interpretation
Uncertain
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