Gene

KWMTBOMO04580

Annotation

PREDICTED:_ragulator_complex_protein_LAMTOR4_homolog_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr8(-):10354771-10355419      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 0.948

CDS

ATGGCTGTATTGGCTATCTTTTCTTTGCCAATCCAATTGTACAAAACAAACAAAGAAATCCAGGAAATTGAAGTGGGTGCTATAATGGATAAAATTCCAGACCAAATCGGCTACCTGGTGTTGACAGAGGACGGTGCTGTCCTTGAATCTGGTGGAGAACTTGAGAACGACGAACGTATCGCAACTATAATAACTGATCTCATCACCCTATCTAATGAGGTTGATTCAGTTGCATTTGGACCAAGTGAGAATTTTAAGAAGATTTCGATAACGTTTGATGATCATTGGTATATTATCTGTCTATCTAATAAAAAGATTTATGTTGTAAAACGCAATATACATACTCCACTCAGAGAAAGTAATGAAATTAATGTGTAG

Protein

MAVLAIFSLPIQLYKTNKEIQEIEVGAIMDKIPDQIGYLVLTEDGAVLESGGELENDERIATIITDLITLSNEVDSVAFGPSENFKKISITFDDHWYIICLSNKKIYVVKRNIHTPLRESNEINV

Uniprot

A0A0L7KWL7   A0A1E1W2M5   A0A194QSP0   A0A194PQI6   A0A3S2LW64   A0A212EL56   + More
A0A3L8DUS9   A0A026WZH8   E2ATW6   A0A151IPL7   A0A0J7L5N9   A0A232F0J3   E2C0Q4   A0A0P6JSQ2   A0A182S0L6   T1E8S0   A0A2M4CMS4   A0A2M3ZD80   A0A2M4C1V0   A0A2M4C0X2   A0A2M4C1W0   A0A2M4AN24   A0A2M3ZKW1   A0A2M4AN17   A0A2M4CML6   A0A182FFR4   W5JAN2   A0A1B6E3E8   N6SZC3   A0A0A9YC49   A0A1A9W742   C3ZE23   A0A2R5LC17  

Pubmed

26227816    26354079    22118469    30249741    24508170    20798317    + More
28648823    26999592    20920257    23761445    23537049    25401762    18563158   

EMBL

JTDY01004881    KOB67638.1    GDQN01009865    JAT81189.1    KQ461154    KPJ08502.1    + More
KQ459595    KPI95572.1    RSAL01000163    RVE45369.1    AGBW02014132    OWR42215.1    QOIP01000004    RLU23933.1    KK107054    EZA61475.1    GL442747    EFN63097.1    KQ976836    KYN07977.1    LBMM01000658    KMQ97863.1    NNAY01001377    OXU24184.1    GL451846    EFN78448.1    GDUN01000157    JAN95762.1    GAMD01001947    JAA99643.1    GGFL01002401    MBW66579.1    GGFM01005677    MBW26428.1    GGFJ01009817    MBW58958.1    GGFJ01009816    MBW58957.1    GGFJ01009827    MBW58968.1    GGFK01008863    MBW42184.1    GGFM01008415    MBW29166.1    GGFK01008864    MBW42185.1    GGFL01002402    MBW66580.1    ADMH02001932    ETN60458.1    GEDC01004842    JAS32456.1    APGK01050958    KB741180    KB631687    ENN73109.1    ERL85388.1    GBHO01012962    GBRD01007934    JAG30642.1    JAG57887.1    GG666612    EEN48979.1    GGLE01002955    MBY07081.1   

Proteomes

UP000037510    UP000053240    UP000053268    UP000283053    UP000007151    UP000279307    + More
UP000053097    UP000000311    UP000078542    UP000036403    UP000215335    UP000008237    UP000075900    UP000069272    UP000000673    UP000019118    UP000030742    UP000091820    UP000001554   

Pfam

PF03259   Robl_LC7

Interpro

IPR034601   LAMTOR4        + More
IPR004942   Roadblock/LAMTOR2_dom       

ProteinModelPortal

A0A0L7KWL7   A0A1E1W2M5   A0A194QSP0   A0A194PQI6   A0A3S2LW64   A0A212EL56   + More
A0A3L8DUS9   A0A026WZH8   E2ATW6   A0A151IPL7   A0A0J7L5N9   A0A232F0J3   E2C0Q4   A0A0P6JSQ2   A0A182S0L6   T1E8S0   A0A2M4CMS4   A0A2M3ZD80   A0A2M4C1V0   A0A2M4C0X2   A0A2M4C1W0   A0A2M4AN24   A0A2M3ZKW1   A0A2M4AN17   A0A2M4CML6   A0A182FFR4   W5JAN2   A0A1B6E3E8   N6SZC3   A0A0A9YC49   A0A1A9W742   C3ZE23   A0A2R5LC17  

PDB

5YK3     E-value=2.07284e-13,     Score=177

KEGG

101742661    K20399 ragulator complex protein LAMTOR4 | (RefSeq) ragulator complex protein LAMTOR4 homolog

PATHWAY

04150    mTOR signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0032008   GO:0071986   GO:0071230   GO:0005764  

PANTHER

PTHR33967  

Length:

125

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00074

Exp number, first 60 AAs:

1e-05

Total prob of N-in:

0.02398

outside

1  -  125

 

 

Pi

158.959322

Theta

125.757916

Tajima's D

0.85059

CLR

0.117437

CSRT

0.617069146542673

Interpretation

Uncertain