SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04579
Pre Gene Modal
BGIBMGA005480
Annotation
PREDICTED:_vacuolar_fusion_protein_CCZ1_homolog_isoform_X1_[Papilio_xuthus]
Full name
Vacuolar fusion protein CCZ1 homolog       + More
Vacuolar fusion protein CCZ1 homolog B      
Alternative Name
Vacuolar fusion protein CCZ1 homolog-like
Location in the cell
Cytoplasmic   Reliability : 1.169 PlasmaMembrane   Reliability : 1.699
 

Sequence

CDS
ATGATAGACTTAAGATCTAAAATCAACTTTTTCTTCGTTTTTAACCCTACCTTTGGACCTAAGGAGGGCGATGAATTAAAGAGAATACTATACTTTTATCCAAATGAAGTCAGTCCAGATGCCCGGAAAATGCAAGTTGGGCTGTGTGAAGCCGTTGTCAAATTTATGTCGACGTTTTCATCTGAACCATGTGAAGCTTTGCAAACACAATCTAAGAGATACATATTTTTTCAACCAGAAAAAAACTTTTGGATGGTTTTAGTAGTCCGAATACCGTATACAACCAAAGCATTGTCAGCAGTTGGTGAAAGTCAGGGAGATATAGTCAATCCTACTGTAATGCAAAATCTCCTAACATCTGCATATAAGATGTTTAAAATGTTCAGGGGCCCATTCAAAAATATTCCAGCTGATGATTTATATGGTATAAGTGAGCAGTTCTTTACGCCTCTTCTATGGAACGGTCTGTGTACAGAAGACATGCTAACATTATACCAATATCTAGTACAGACATTGCTCCCTAAACAAGTTGAAATAGAAATCCAAGGTGGTGTAGTGACAGCAGCGCAGAGACTTGGCCGATTCATAAGTCCGCCAGATGGAATACATGTTAAAGAAGACTTAGATAAATTGATAAAGATACACGTAACACTCGAAGATGATACAGAATTTAAGGAATACTACCTCCTCATATACAGAACATTGAGTGCGACTGTCTGTTTCACTATTGATGTAAACACTCGGCTGGAACTTGATACGGTCAAGTCAGTGGACGCATTTATTGGGCCGCAGCTATCAGCAATAGCTTCGGCCATCAGCGAACAATGTTCATTGCACGCATTACAAGCAGCGCAACTGGCTAGCGAACACAAGTTCGTGTACTTCAACAGATTAAATTTAATTTTGAAATCATCTCCACCAGTAAATAAATTGCAAATATCCGCTGCGATAAAACCTGAAGTTCTTAGTATCATGTCTGGAATTCATGCTGACCGACAAAGCCTTGGAAATTATGGAGAAATAATAATTAAAACTCCAGACGAATACTGGATAACAGGAAAATGTTCCAATGACAGAGAATTCTATGTGATAATACAAGAGAAAAATGCCAACCTTAAAGAAATAGCGGATGAAGTGAAGCGTGTCTGTGAAGCACAAATGAAAGGGATATTCTTTTACCCTATGTAA
Protein
MIDLRSKINFFFVFNPTFGPKEGDELKRILYFYPNEVSPDARKMQVGLCEAVVKFMSTFSSEPCEALQTQSKRYIFFQPEKNFWMVLVVRIPYTTKALSAVGESQGDIVNPTVMQNLLTSAYKMFKMFRGPFKNIPADDLYGISEQFFTPLLWNGLCTEDMLTLYQYLVQTLLPKQVEIEIQGGVVTAAQRLGRFISPPDGIHVKEDLDKLIKIHVTLEDDTEFKEYYLLIYRTLSATVCFTIDVNTRLELDTVKSVDAFIGPQLSAIASAISEQCSLHALQAAQLASEHKFVYFNRLNLILKSSPPVNKLQISAAIKPEVLSIMSGIHADRQSLGNYGEIIIKTPDEYWITGKCSNDREFYVIIQEKNANLKEIADEVKRVCEAQMKGIFFYPM

Summary

Description
Acts in concert with MON1A, as a guanine exchange factor (GEF) for RAB7, promotes the exchange of GDP to GTP, converting it from an inactive GDP-bound form into an active GTP-bound form.
Acts in concert with MON1A, as a guanine exchange factor (GEF) for RAB7, promotes the exchange of GDP to GTP, converting it from an inactive GDP-bound form into an active GTP-bound form (PubMed:23084991).
Subunit
Interacts with MON1A. Found in a complex with RMC1, CCZ1 MON1A and MON1B.
Interacts with MON1A. Found in a complex with RMC1, CCZ1, MON1A and MON1B.
Interacts with MON1A (PubMed:23084991). Found in a complex with RMC1, CCZ1, MON1A and MON1B (PubMed:29038162).
Similarity
Belongs to the CCZ1 family.
Keywords
Acetylation   Complete proteome   Guanine-nucleotide releasing factor   Lysosome   Membrane   Phosphoprotein   Reference proteome  
Feature
chain  Vacuolar fusion protein CCZ1 homolog
EMBL
KQ459595    KPI95570.1    KQ461154    KPJ08500.1    RSAL01000163    RVE45368.1    + More
ODYU01011808    SOQ57765.1    BABH01013921    NWSH01001841    PCG69942.1    GAIX01013429    JAA79131.1    AGBW02014132    OWR42213.1    HACG01027917    CEK74782.1    RAZU01000163    RLQ68066.1    KK852824    KDR15453.1    KQ971319    EFA00460.2    NNAY01000365    OXU28858.1    AC126486    AK090008    AK150793    AK152328    AK152576    AK153160    BC048077    AAMC01007054    AAMC01007055    AAMC01007056    CM004482    OCT64210.1    CR760737    GDAY02002918    JAV48549.1    GAAZ01002916    JAA95027.1    JH001891    EGW02542.1    GAEP01001871    JAB52950.1    GL446270    EFN88171.1    AKHW03004154    KYO30646.1    GABZ01005828    JAA47697.1    AEFK01075610    AEFK01075611    AEFK01075612    AEFK01075613    AEFK01075614    AEFK01075615    AAQR03148892    AAQR03148893    AAQR03148894    AAQR03148895    CM004483    OCT61586.1    BC055965    HACG01027918    CEK74783.1    IACM01117687    LAB35803.1    AAWZ02029387    GFFW01001260    JAV43528.1    JH169911    GEBF01002442    EHB07893.1    JAO01191.1    AAPE02034763    AGTP01102874    GEBQ01013802    JAT26175.1    BC119863    KK678304    KFQ10810.1    AHAT01013702    IACN01006609    LAB46094.1    AANG04004562    LSYS01001700    OPJ87253.1    KZ288266    PBC30148.1    AADN05000376    PPHD01000222    POI35765.1    AJ719702    AWGT02000022    OXB82712.1    KL214745    KFV61602.1    KK813486    KFQ37220.1    HAAF01006484    CCP78308.1    BT127108    AEE62070.1    NBAG03000362    PNI35261.1    KN123370    KFO25323.1    KL896048    KGL83154.1    LMAW01000001    KQL61533.1    ACTA01178351    ACTA01186349    GFFV01002420    JAV37525.1    GABC01000765    GABF01007286    JAA10573.1    JAA14859.1    AC193266    GABC01000764    GABF01007285    GABD01003299    GABD01003298    GABE01009998    JAA10574.1    JAA14860.1    JAA29801.1    JAA34741.1    AGTO01020915    AAKN02032157    AAKN02032158    AAKN02032159    AC192442    AK305918    BAK62912.1    AF151801    AK292326    AC004983    BC132749    BC132751    AC079882    BC010130    GAMS01008908    GAMR01004692    GAMQ01005809    GAMP01002176    JAB14228.1    JAB29240.1    JAB36042.1    JAB50579.1    ABGA01163992    ABGA01163993    NDHI03004471    PNJ01525.1    GAMT01008599    JAB03262.1    JU475946    AFH32750.1    MUZQ01000034    OWK61949.1    JSUE03027732    JSUE03027733    JSUE03027734    JSUE03027735    JSUE03027736    JSUE03027737    JSUE03027738    JSUE03027739    JSUE03027740    JSUE03027741    JU475947    AFH32751.1    JU334942    AFE78695.1    AHZZ02022003   
Pfam
PF08217   DUF1712
Interpro
IPR013176   Ccz1       

Ontologies

Topology

Subcellular location
Lysosome membrane  
Length:
395
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01385
Exp number, first 60 AAs:
0.00014
Total prob of N-in:
0.01027
outside
1  -  395
 
 

Population Genetic Test Statistics

Pi
228.721983
Theta
150.970328
Tajima's D
1.440116
CLR
0
CSRT
0.773061346932653
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号